RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 GREM2Q9H772 168 aa12.21□□□□□ -0.46
RBFOX1-202ENST00000340209 KDM3BQ7LBC6 1761 aa12.21□□□□□ -0.46
RBFOX1-202ENST00000340209 NCOA3Q9Y6Q9 1424 aa12.21□□□□□ -0.46
RBFOX1-202ENST00000340209 TOM1O60784 492 aa12.21□□□□□ -0.46
RBFOX1-202ENST00000340209 APPP05067 770 aa12.21□□□□□ -0.46
RBFOX1-202ENST00000340209 CCDC191Q8NCU4 936 aa12.21□□□□□ -0.46
RBFOX1-202ENST00000340209 SMC3Q9UQE7 1217 aa12.21□□□□□ -0.46
RBFOX1-202ENST00000340209 PANK2Q9BZ23 570 aa12.2□□□□□ -0.46
RBFOX1-202ENST00000340209 CYP46A1Q9Y6A2 500 aa12.2□□□□□ -0.46
RBFOX1-202ENST00000340209 TAF5LO75529 589 aa12.2□□□□□ -0.46
RBFOX1-202ENST00000340209 IDH1O75874 414 aaKnown RBP12.2□□□□□ -0.46
RBFOX1-202ENST00000340209 FOXO4P98177 505 aa12.2□□□□□ -0.46
RBFOX1-202ENST00000340209 GOLGB1Q14789 3259 aaKnown RBP12.2□□□□□ -0.46
RBFOX1-202ENST00000340209 CCDC171Q6TFL3 1326 aa12.2□□□□□ -0.46
RBFOX1-202ENST00000340209 EYA2O00167 538 aa12.2□□□□□ -0.46
RBFOX1-202ENST00000340209 LARGE1O95461 756 aa12.2□□□□□ -0.46
RBFOX1-202ENST00000340209 ITGA6P23229 1130 aa12.2□□□□□ -0.46
RBFOX1-202ENST00000340209 HSPA4P34932 840 aa12.2□□□□□ -0.46
RBFOX1-202ENST00000340209 STRCQ7RTU9 1775 aa12.19□□□□□ -0.46
RBFOX1-202ENST00000340209 NUCB2P80303 420 aa12.19□□□□□ -0.46
RBFOX1-202ENST00000340209 CREB3L3Q68CJ9 461 aa12.19□□□□□ -0.46
RBFOX1-202ENST00000340209 PTF1AQ7RTS3 328 aa12.19□□□□□ -0.46
RBFOX1-202ENST00000340209 COPRSQ9NQ92 184 aa12.19□□□□□ -0.46
RBFOX1-202ENST00000340209 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.46
RBFOX1-202ENST00000340209 FIBPO43427 364 aa12.19□□□□□ -0.46
RBFOX1-202ENST00000340209 DDX11Q96FC9 970 aa12.19□□□□□ -0.46
RBFOX1-202ENST00000340209 H7C1W4 665 aa12.18□□□□□ -0.46
RBFOX1-202ENST00000340209 RFX5P48382 616 aaPredicted RBP12.18□□□□□ -0.46
RBFOX1-202ENST00000340209 CCDC158Q5M9N0 1113 aa12.18□□□□□ -0.46
RBFOX1-202ENST00000340209 MARCH10Q8NA82 808 aaPredicted RBP12.18□□□□□ -0.46
RBFOX1-202ENST00000340209 PAG1Q9NWQ8 432 aa12.18□□□□□ -0.46
RBFOX1-202ENST00000340209 C5P01031 1676 aa12.18□□□□□ -0.46
RBFOX1-202ENST00000340209 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
RBFOX1-202ENST00000340209 BLOC1S2Q6QNY1 142 aa12.18□□□□□ -0.46
RBFOX1-202ENST00000340209 AOX1Q06278 1338 aa12.18□□□□□ -0.46
RBFOX1-202ENST00000340209 MPHOSPH8Q99549 860 aa12.18□□□□□ -0.46
RBFOX1-202ENST00000340209 CIZ1Q9ULV3 898 aaPredicted RBP12.18□□□□□ -0.46
RBFOX1-202ENST00000340209 IL15P40933 162 aaPredicted RBP12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 CRKLP46109 303 aaKnown RBP12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 TOMM22Q9NS69 142 aa12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 CACNA1FO60840 1977 aa12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 LOC102724428A0A0B4J2F2 783 aa12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 SIK1P57059 783 aa12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 SEC31BQ9NQW1 1179 aa12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 MAP3K15Q6ZN16 1313 aa12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 CYP19A1P11511 503 aaPredicted RBP12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 RNF20Q5VTR2 975 aa12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 USP54Q70EL1 1684 aa12.17□□□□□ -0.46
RBFOX1-202ENST00000340209 A0A0G2JLW4 131 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 ANKRD18BA2A2Z9 1011 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 ATP2B3Q16720 1220 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 ATG9AQ7Z3C6 839 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 NLRP10Q86W26 655 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 XAGE2Q96GT9 111 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 JAG2Q9Y219 1238 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 SLC27A2O14975 620 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 RUFY3Q7L099 469 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 RNF214Q8ND24 703 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 TTLL5Q6EMB2 1281 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 GIGYF2Q6Y7W6 1299 aaKnown RBP12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 CHMP4CQ96CF2 233 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 XIRP1Q702N8 1843 aaKnown RBP12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 SCARF1Q14162 830 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 FAM173BQ6P4H8 233 aa12.16□□□□□ -0.46
RBFOX1-202ENST00000340209 HIP1O00291 1037 aa12.15□□□□□ -0.46
RBFOX1-202ENST00000340209 ZAP70P43403 619 aa12.15□□□□□ -0.46
RBFOX1-202ENST00000340209 PLCB2Q00722 1185 aa12.15□□□□□ -0.46
RBFOX1-202ENST00000340209 LIMCH1Q9UPQ0 1083 aa12.15□□□□□ -0.46
RBFOX1-202ENST00000340209 UTYO14607 1347 aa12.15□□□□□ -0.46
RBFOX1-202ENST00000340209 CASP7P55210 303 aa12.15□□□□□ -0.46
RBFOX1-202ENST00000340209 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.46
RBFOX1-202ENST00000340209 CEBPZQ03701 1054 aaKnown RBP12.15□□□□□ -0.46
RBFOX1-202ENST00000340209 GJB2P29033 226 aa12.15□□□□□ -0.47
RBFOX1-202ENST00000340209 CCDC87Q9NVE4 849 aa12.15□□□□□ -0.47
RBFOX1-202ENST00000340209 COL18A1P39060 1754 aa12.15□□□□□ -0.47
RBFOX1-202ENST00000340209 SCN11AQ9UI33 1791 aa12.14□□□□□ -0.47
RBFOX1-202ENST00000340209 ITPK1Q13572 414 aa12.14□□□□□ -0.47
RBFOX1-202ENST00000340209 ATP5JP18859 108 aa12.14□□□□□ -0.47
RBFOX1-202ENST00000340209 RABL6Q3YEC7 729 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-202ENST00000340209 ZBTB38Q8NAP3 1195 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-202ENST00000340209 MCM2P49736 904 aa12.14□□□□□ -0.47
RBFOX1-202ENST00000340209 ANAPC15P60006 121 aa12.14□□□□□ -0.47
RBFOX1-202ENST00000340209 GUCY1B3Q02153 619 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 SLC4A8Q2Y0W8 1093 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 BRF1Q92994 677 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 CWC22Q9HCG8 908 aaKnown RBP12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 ABCF2Q9UG63 623 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 ZDHHC9Q9Y397 364 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 CTSWP56202 376 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 SUSD4Q5VX71 490 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 ISCA1Q9BUE6 129 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 ERBB4Q15303 1308 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 SPATA31A1Q5TZJ5 1347 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 MCMDC2Q4G0Z9 681 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 MPNDQ8N594 471 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 USP21Q9UK80 565 aa12.13□□□□□ -0.47
RBFOX1-202ENST00000340209 PCCAP05165 728 aaPredicted RBP12.12□□□□□ -0.47
RBFOX1-202ENST00000340209 SRP68Q9UHB9 627 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms