RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 HSP90B1P14625 803 aaKnown RBP9.7□□□□□ -0.86
TMC1-202ENST00000340019 FAM161AQ3B820 660 aa9.7□□□□□ -0.86
TMC1-202ENST00000340019 STK32BQ9NY57 414 aa9.7□□□□□ -0.86
TMC1-202ENST00000340019 SMARCA5O60264 1052 aaPredicted RBP9.69□□□□□ -0.86
TMC1-202ENST00000340019 RGS3P49796 1198 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 TPTE2Q6XPS3 522 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 NBPF5PQ86XG9 351 aaPredicted RBP9.69□□□□□ -0.86
TMC1-202ENST00000340019 GREM2Q9H772 168 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 LRP5O75197 1615 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 APBB1O00213 710 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 RHPN1Q8TCX5 695 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 KIF1BPQ96EK5 621 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 CHMP3Q9Y3E7 222 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 TNRC6CQ9HCJ0 1690 aaKnown RBP9.69□□□□□ -0.86
TMC1-202ENST00000340019 RTL9Q8NET4 1388 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 SASH1O94885 1247 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 CCDC57Q2TAC2 916 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 ERC1Q8IUD2 1116 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 NLGN1Q8N2Q7 840 aa9.69□□□□□ -0.86
TMC1-202ENST00000340019 RIC1Q4ADV7 1423 aa9.68□□□□□ -0.86
TMC1-202ENST00000340019 POLRMTO00411 1230 aaKnown RBP9.68□□□□□ -0.86
TMC1-202ENST00000340019 ITGA6P23229 1130 aa9.68□□□□□ -0.86
TMC1-202ENST00000340019 DDR1Q08345 913 aa9.68□□□□□ -0.86
TMC1-202ENST00000340019 IFIT5Q13325 482 aaKnown RBP9.68□□□□□ -0.86
TMC1-202ENST00000340019 SF3B3Q15393 1217 aaKnown RBP9.68□□□□□ -0.86
TMC1-202ENST00000340019 C16orf71Q8IYS4 520 aaPredicted RBP9.68□□□□□ -0.86
TMC1-202ENST00000340019 UPF1Q92900 1129 aaKnown RBP eCLIP9.68□□□□□ -0.86
TMC1-202ENST00000340019 G3BP1Q13283 466 aaKnown RBP eCLIP9.68□□□□□ -0.86
TMC1-202ENST00000340019 C3orf67Q6ZVT6 689 aa9.68□□□□□ -0.86
TMC1-202ENST00000340019 ATG9AQ7Z3C6 839 aa9.68□□□□□ -0.86
TMC1-202ENST00000340019 ZNF594Q96JF6 807 aaPredicted RBP9.68□□□□□ -0.86
TMC1-202ENST00000340019 CCDC85AQ96PX6 553 aaPredicted RBP9.68□□□□□ -0.86
TMC1-202ENST00000340019 SIL1Q9H173 461 aa9.68□□□□□ -0.86
TMC1-202ENST00000340019 FBXO3Q9UK99 471 aa9.68□□□□□ -0.86
TMC1-202ENST00000340019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.68□□□□□ -0.86
TMC1-202ENST00000340019 SALL3Q9BXA9 1300 aa9.68□□□□□ -0.86
TMC1-202ENST00000340019 CIAO1O76071 339 aa9.67□□□□□ -0.86
TMC1-202ENST00000340019 PRR5LQ6MZQ0 368 aa9.67□□□□□ -0.86
TMC1-202ENST00000340019 COL4A1P02462 1669 aa9.67□□□□□ -0.86
TMC1-202ENST00000340019 SERPINB2P05120 415 aa9.67□□□□□ -0.86
TMC1-202ENST00000340019 GTF2E1P29083 439 aaPredicted RBP9.67□□□□□ -0.86
TMC1-202ENST00000340019 OS9Q13438 667 aaPredicted RBP9.67□□□□□ -0.86
TMC1-202ENST00000340019 CCDC152Q4G0S7 254 aa9.67□□□□□ -0.86
TMC1-202ENST00000340019 PLEKHM2Q8IWE5 1019 aa9.67□□□□□ -0.86
TMC1-202ENST00000340019 CNBD1Q8NA66 436 aa9.67□□□□□ -0.86
TMC1-202ENST00000340019 OTUD7AQ8TE49 926 aaPredicted RBP9.67□□□□□ -0.86
TMC1-202ENST00000340019 IL1RAPL2Q9NP60 686 aa9.67□□□□□ -0.86
TMC1-202ENST00000340019 ZBTB47Q9UFB7 747 aaPredicted RBP9.67□□□□□ -0.86
TMC1-202ENST00000340019 ANKRD18BA2A2Z9 1011 aa9.67□□□□□ -0.86
TMC1-202ENST00000340019 EYA2O00167 538 aa9.67□□□□□ -0.86
TMC1-202ENST00000340019 TAF1P21675 1872 aa9.66□□□□□ -0.86
TMC1-202ENST00000340019 SPEF2Q9C093 1822 aa9.66□□□□□ -0.86
TMC1-202ENST00000340019 IL15P40933 162 aaPredicted RBP9.66□□□□□ -0.86
TMC1-202ENST00000340019 LRRC24Q50LG9 513 aa9.66□□□□□ -0.86
TMC1-202ENST00000340019 CCDC24Q8N4L8 307 aa9.66□□□□□ -0.86
TMC1-202ENST00000340019 ANKRD31Q8N7Z5 1873 aa9.66□□□□□ -0.86
TMC1-202ENST00000340019 NLRP3Q96P20 1036 aa9.66□□□□□ -0.86
TMC1-202ENST00000340019 PUS3Q9BZE2 481 aaKnown RBP9.66□□□□□ -0.86
TMC1-202ENST00000340019 OSBPL3Q9H4L5 887 aa9.66□□□□□ -0.86
TMC1-202ENST00000340019 SEC31BQ9NQW1 1179 aa9.65□□□□□ -0.86
TMC1-202ENST00000340019 RIPOR2Q9Y4F9 1068 aa9.65□□□□□ -0.86
TMC1-202ENST00000340019 CLASRPQ8N2M8 674 aaKnown RBP9.65□□□□□ -0.86
TMC1-202ENST00000340019 PDGFDQ9GZP0 370 aaPredicted RBP9.65□□□□□ -0.86
TMC1-202ENST00000340019 TFCP2Q12800 502 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 EAF2Q96CJ1 260 aaPredicted RBP9.64□□□□□ -0.87
TMC1-202ENST00000340019 STAP2Q9UGK3 403 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 A0A1B0GUL6 1792 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 MMP10P09238 476 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 PDE1AP54750 535 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 ST5P78524 1137 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 CRY2Q49AN0 593 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 TAF7LQ5H9L4 462 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 KLRG2A4D1S0 409 aaPredicted RBP9.64□□□□□ -0.87
TMC1-202ENST00000340019 NPHP1O15259 732 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 MX1P20591 662 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 MSL1Q68DK7 614 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 LDHAL6AQ6ZMR3 332 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 GPR108Q9NPR9 543 aa9.64□□□□□ -0.87
TMC1-202ENST00000340019 TNNI3KQ59H18 835 aa9.63□□□□□ -0.87
TMC1-202ENST00000340019 FPGT-TNNI3KV9GXZ4 949 aa9.63□□□□□ -0.87
TMC1-202ENST00000340019 BMP2KLQ5H9B9 411 aa9.63□□□□□ -0.87
TMC1-202ENST00000340019 AACSQ86V21 672 aa9.63□□□□□ -0.87
TMC1-202ENST00000340019 VGLL2Q8N8G2 317 aa9.63□□□□□ -0.87
TMC1-202ENST00000340019 CDC5LQ99459 802 aaKnown RBP9.63□□□□□ -0.87
TMC1-202ENST00000340019 BCL11AQ9H165 835 aa9.63□□□□□ -0.87
TMC1-202ENST00000340019 GSPT1P15170 499 aaKnown RBP9.62□□□□□ -0.87
TMC1-202ENST00000340019 TTC22Q5TAA0 569 aa9.62□□□□□ -0.87
TMC1-202ENST00000340019 SLC16A10Q8TF71 515 aa9.62□□□□□ -0.87
TMC1-202ENST00000340019 PARP3Q9Y6F1 533 aa9.62□□□□□ -0.87
TMC1-202ENST00000340019 AOX1Q06278 1338 aa9.62□□□□□ -0.87
TMC1-202ENST00000340019 ZNF609O15014 1411 aa9.62□□□□□ -0.87
TMC1-202ENST00000340019 CELF1Q92879 486 aaKnown RBP9.62□□□□□ -0.87
TMC1-202ENST00000340019 CNNM1Q9NRU3 951 aa9.62□□□□□ -0.87
TMC1-202ENST00000340019 TTC41PQ6P2S7 1318 aa9.62□□□□□ -0.87
TMC1-202ENST00000340019 MROH5Q6ZUA9 1318 aa9.62□□□□□ -0.87
TMC1-202ENST00000340019 IGHMBP2P38935 993 aaKnown RBP9.62□□□□□ -0.87
TMC1-202ENST00000340019 PI4K2BQ8TCG2 481 aa9.62□□□□□ -0.87
TMC1-202ENST00000340019 MPHOSPH8Q99549 860 aa9.62□□□□□ -0.87
TMC1-202ENST00000340019 BRIP1Q9BX63 1249 aa9.62□□□□□ -0.87
TMC1-202ENST00000340019 BSDC1Q9NW68 430 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms