RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 LRP2BPQ9P2M1 347 aa19.49■□□□□ 0.71
PRDM8-201ENST00000339711 RAB3GAP1Q15042 981 aa19.49■□□□□ 0.71
PRDM8-201ENST00000339711 HMG20BQ9P0W2 317 aa19.49■□□□□ 0.71
PRDM8-201ENST00000339711 ATP10DQ9P241 1426 aa19.48■□□□□ 0.71
PRDM8-201ENST00000339711 SLC5A1P13866 664 aa19.48■□□□□ 0.71
PRDM8-201ENST00000339711 ABCF2Q9UG63 623 aa19.48■□□□□ 0.71
PRDM8-201ENST00000339711 ERICH2A1L162 156 aa19.48■□□□□ 0.71
PRDM8-201ENST00000339711 NDUFB9Q9Y6M9 179 aa19.48■□□□□ 0.71
PRDM8-201ENST00000339711 CCDC171Q6TFL3 1326 aa19.48■□□□□ 0.71
PRDM8-201ENST00000339711 A0A1B0GUL7 405 aa19.48■□□□□ 0.71
PRDM8-201ENST00000339711 RRP12Q5JTH9 1297 aaKnown RBP19.48■□□□□ 0.71
PRDM8-201ENST00000339711 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.48■□□□□ 0.71
PRDM8-201ENST00000339711 SPC24Q8NBT2 197 aa19.48■□□□□ 0.71
PRDM8-201ENST00000339711 AIDAQ96BJ3 306 aa19.48■□□□□ 0.71
PRDM8-201ENST00000339711 COPRSQ9NQ92 184 aa19.48■□□□□ 0.71
PRDM8-201ENST00000339711 PIGBQ92521 554 aa19.47■□□□□ 0.71
PRDM8-201ENST00000339711 PANK2Q9BZ23 570 aa19.47■□□□□ 0.71
PRDM8-201ENST00000339711 RAD50Q92878 1312 aa19.47■□□□□ 0.71
PRDM8-201ENST00000339711 CCAR2Q8N163 923 aaKnown RBP19.47■□□□□ 0.71
PRDM8-201ENST00000339711 EDC3Q96F86 508 aaKnown RBP19.47■□□□□ 0.71
PRDM8-201ENST00000339711 NEK1Q96PY6 1258 aa19.47■□□□□ 0.71
PRDM8-201ENST00000339711 AKAP17AQ02040 695 aaKnown RBP19.46■□□□□ 0.71
PRDM8-201ENST00000339711 CREB3L3Q68CJ9 461 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 FERMT3Q86UX7 667 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 NCOA3Q9Y6Q9 1424 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 CPA1P15085 419 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 TRIM29Q14134 588 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 FAM98CQ17RN3 349 aaKnown RBP19.46■□□□□ 0.71
PRDM8-201ENST00000339711 RASSF8Q8NHQ8 419 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 DDX11Q96FC9 970 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 NOL10Q9BSC4 688 aaKnown RBP19.46■□□□□ 0.71
PRDM8-201ENST00000339711 NACAP1Q9BZK3 213 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 DCCP43146 1447 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 SYCE3A1L190 88 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 TPM4P67936 248 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 MTX1Q13505 466 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 UTP14AQ9BVJ6 771 aaKnown RBP19.46■□□□□ 0.71
PRDM8-201ENST00000339711 GDPD2Q9HCC8 539 aa19.46■□□□□ 0.71
PRDM8-201ENST00000339711 AK2P54819 239 aa19.46■□□□□ 0.7
PRDM8-201ENST00000339711 HELBQ8NG08 1087 aaPredicted RBP19.46■□□□□ 0.7
PRDM8-201ENST00000339711 PALD1Q9ULE6 856 aa19.46■□□□□ 0.7
PRDM8-201ENST00000339711 DHX16O60231 1041 aaKnown RBP19.45■□□□□ 0.7
PRDM8-201ENST00000339711 CCDC152Q4G0S7 254 aa19.45■□□□□ 0.7
PRDM8-201ENST00000339711 RAI14Q9P0K7 980 aa19.45■□□□□ 0.7
PRDM8-201ENST00000339711 CD2BP2O95400 341 aaKnown RBP19.45■□□□□ 0.7
PRDM8-201ENST00000339711 HMGB1P09429 215 aaKnown RBP19.45■□□□□ 0.7
PRDM8-201ENST00000339711 STK11IPQ8N1F8 1099 aa19.45■□□□□ 0.7
PRDM8-201ENST00000339711 CDC5LQ99459 802 aaKnown RBP19.45■□□□□ 0.7
PRDM8-201ENST00000339711 SOS2Q07890 1332 aaPredicted RBP19.44■□□□□ 0.7
PRDM8-201ENST00000339711 PES1O00541 588 aaKnown RBP19.44■□□□□ 0.7
PRDM8-201ENST00000339711 HSPA4P34932 840 aa19.44■□□□□ 0.7
PRDM8-201ENST00000339711 MAP3K12Q12852 859 aa19.44■□□□□ 0.7
PRDM8-201ENST00000339711 NECAB1Q8N987 351 aa19.44■□□□□ 0.7
PRDM8-201ENST00000339711 SNX14Q9Y5W7 946 aa19.44■□□□□ 0.7
PRDM8-201ENST00000339711 ITGA6P23229 1130 aa19.44■□□□□ 0.7
PRDM8-201ENST00000339711 KRT85P78386 507 aa19.44■□□□□ 0.7
PRDM8-201ENST00000339711 SASH1O94885 1247 aa19.43■□□□□ 0.7
PRDM8-201ENST00000339711 ATP5JP18859 108 aa19.43■□□□□ 0.7
PRDM8-201ENST00000339711 EPHA10Q5JZY3 1008 aa19.43■□□□□ 0.7
PRDM8-201ENST00000339711 SASS6Q6UVJ0 657 aa19.43■□□□□ 0.7
PRDM8-201ENST00000339711 TLR7Q9NYK1 1049 aaKnown RBP19.43■□□□□ 0.7
PRDM8-201ENST00000339711 HCLS1P14317 486 aaPredicted RBP19.43■□□□□ 0.7
PRDM8-201ENST00000339711 HAND2P61296 217 aa19.43■□□□□ 0.7
PRDM8-201ENST00000339711 SART3Q15020 963 aaKnown RBP19.43■□□□□ 0.7
PRDM8-201ENST00000339711 ZFYP08048 801 aaPredicted RBP19.43■□□□□ 0.7
PRDM8-201ENST00000339711 GJB2P29033 226 aa19.43■□□□□ 0.7
PRDM8-201ENST00000339711 TDO2P48775 406 aa19.43■□□□□ 0.7
PRDM8-201ENST00000339711 CCDC87Q9NVE4 849 aa19.43■□□□□ 0.7
PRDM8-201ENST00000339711 SH3TC1Q8TE82 1336 aa19.43■□□□□ 0.7
PRDM8-201ENST00000339711 AKAP12Q02952 1782 aa19.42■□□□□ 0.7
PRDM8-201ENST00000339711 STX6O43752 255 aa19.42■□□□□ 0.7
PRDM8-201ENST00000339711 TTF1Q15361 905 aaPredicted RBP19.42■□□□□ 0.7
PRDM8-201ENST00000339711 ZNF213O14771 459 aa19.42■□□□□ 0.7
PRDM8-201ENST00000339711 ZBTB1Q9Y2K1 713 aa19.42■□□□□ 0.7
PRDM8-201ENST00000339711 PI4K2BQ8TCG2 481 aa19.41■□□□□ 0.7
PRDM8-201ENST00000339711 TSPY26PQ9H489 355 aa19.41■□□□□ 0.7
PRDM8-201ENST00000339711 CAVIN4Q5BKX8 364 aa19.41■□□□□ 0.7
PRDM8-201ENST00000339711 AMOTL1Q8IY63 956 aa19.41■□□□□ 0.7
PRDM8-201ENST00000339711 INTS4Q96HW7 963 aaKnown RBP19.41■□□□□ 0.7
PRDM8-201ENST00000339711 EPB41L2O43491 1005 aaKnown RBP19.41■□□□□ 0.7
PRDM8-201ENST00000339711 UQCRFS1P1P0C7P4 283 aa19.41■□□□□ 0.7
PRDM8-201ENST00000339711 PDIA4P13667 645 aaKnown RBP19.41■□□□□ 0.7
PRDM8-201ENST00000339711 PTPN12Q05209 780 aaKnown RBP19.41■□□□□ 0.7
PRDM8-201ENST00000339711 CCDC173Q0VFZ6 552 aa19.41■□□□□ 0.7
PRDM8-201ENST00000339711 SDF4Q9BRK5 362 aa19.41■□□□□ 0.7
PRDM8-201ENST00000339711 LRRC2Q9BYS8 371 aa19.41■□□□□ 0.7
PRDM8-201ENST00000339711 CCDC129Q6ZRS4 1044 aa19.41■□□□□ 0.7
PRDM8-201ENST00000339711 TRIM5Q9C035 493 aa19.41■□□□□ 0.7
PRDM8-201ENST00000339711 DBNLQ9UJU6 430 aaKnown RBP19.41■□□□□ 0.7
PRDM8-201ENST00000339711 PDE8AO60658 829 aa19.4■□□□□ 0.7
PRDM8-201ENST00000339711 KBTBD3Q8NAB2 608 aa19.4■□□□□ 0.7
PRDM8-201ENST00000339711 KDM4FA0A1W2PPD8 638 aa19.4■□□□□ 0.7
PRDM8-201ENST00000339711 RNF113AO15541 343 aaKnown RBP19.4■□□□□ 0.7
PRDM8-201ENST00000339711 LRRC24Q50LG9 513 aa19.4■□□□□ 0.7
PRDM8-201ENST00000339711 GIGYF2Q6Y7W6 1299 aaKnown RBP19.4■□□□□ 0.7
PRDM8-201ENST00000339711 ZBTB38Q8NAP3 1195 aaPredicted RBP19.4■□□□□ 0.7
PRDM8-201ENST00000339711 BRF1Q92994 677 aa19.4■□□□□ 0.7
PRDM8-201ENST00000339711 ANTXR1Q9H6X2 564 aa19.4■□□□□ 0.7
PRDM8-201ENST00000339711 MAP3K15Q6ZN16 1313 aa19.4■□□□□ 0.7
PRDM8-201ENST00000339711 NBPF26B4DH59 902 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms