RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 FPGT-TNNI3KV9GXZ4 949 aa18■□□□□ 0.47
TNFSF13-201ENST00000338784 PDIA4P13667 645 aaKnown RBP17.99■□□□□ 0.47
TNFSF13-201ENST00000338784 ST3GAL1Q11201 340 aa17.99■□□□□ 0.47
TNFSF13-201ENST00000338784 TFCP2Q12800 502 aa17.99■□□□□ 0.47
TNFSF13-201ENST00000338784 ANKRD1Q15327 319 aa17.99■□□□□ 0.47
TNFSF13-201ENST00000338784 BLOC1S2Q6QNY1 142 aa17.99■□□□□ 0.47
TNFSF13-201ENST00000338784 HMG20BQ9P0W2 317 aa17.99■□□□□ 0.47
TNFSF13-201ENST00000338784 DBNLQ9UJU6 430 aaKnown RBP17.99■□□□□ 0.47
TNFSF13-201ENST00000338784 A0A087WZG4 1122 aa17.99■□□□□ 0.47
TNFSF13-201ENST00000338784 LETM1O95202 739 aaPredicted RBP17.99■□□□□ 0.47
TNFSF13-201ENST00000338784 PLBD2Q8NHP8 589 aa17.99■□□□□ 0.47
TNFSF13-201ENST00000338784 ATP5J2-PTCD1G3V325 749 aa17.98■□□□□ 0.47
TNFSF13-201ENST00000338784 FIBPO43427 364 aa17.98■□□□□ 0.47
TNFSF13-201ENST00000338784 PTCD1O75127 700 aaKnown RBP17.98■□□□□ 0.47
TNFSF13-201ENST00000338784 ZNF589Q86UQ0 364 aaPredicted RBP17.98■□□□□ 0.47
TNFSF13-201ENST00000338784 NECAB1Q8N987 351 aa17.98■□□□□ 0.47
TNFSF13-201ENST00000338784 ALDH8A1Q9H2A2 487 aaPredicted RBP17.98■□□□□ 0.47
TNFSF13-201ENST00000338784 JCADQ9P266 1359 aa17.98■□□□□ 0.47
TNFSF13-201ENST00000338784 TSGA10IPQ3SY00 556 aa17.97■□□□□ 0.47
TNFSF13-201ENST00000338784 FAM184AQ8NB25 1140 aa17.97■□□□□ 0.47
TNFSF13-201ENST00000338784 SPATA31A3Q5VYP0 1347 aa17.97■□□□□ 0.47
TNFSF13-201ENST00000338784 TAF5LO75529 589 aa17.97■□□□□ 0.47
TNFSF13-201ENST00000338784 RPS6KB1P23443 525 aa17.97■□□□□ 0.47
TNFSF13-201ENST00000338784 EDC3Q96F86 508 aaKnown RBP17.97■□□□□ 0.47
TNFSF13-201ENST00000338784 RGS17Q9UGC6 210 aaPredicted RBP17.97■□□□□ 0.47
TNFSF13-201ENST00000338784 ROBO1Q9Y6N7 1651 aa17.97■□□□□ 0.47
TNFSF13-201ENST00000338784 CPDO75976 1380 aa17.96■□□□□ 0.47
TNFSF13-201ENST00000338784 VPS37CA5D8V6 355 aaPredicted RBP17.96■□□□□ 0.47
TNFSF13-201ENST00000338784 CASP7P55210 303 aa17.96■□□□□ 0.47
TNFSF13-201ENST00000338784 DNM1Q05193 864 aaKnown RBP17.96■□□□□ 0.47
TNFSF13-201ENST00000338784 CCDC39Q9UFE4 941 aa17.96■□□□□ 0.47
TNFSF13-201ENST00000338784 USPL1Q5W0Q7 1092 aa17.95■□□□□ 0.46
TNFSF13-201ENST00000338784 LARP1BQ659C4 914 aaKnown RBP17.95■□□□□ 0.46
TNFSF13-201ENST00000338784 RFX7Q2KHR2 1363 aa17.95■□□□□ 0.46
TNFSF13-201ENST00000338784 PDCP20941 246 aa17.95■□□□□ 0.46
TNFSF13-201ENST00000338784 KRT32Q14532 448 aa17.95■□□□□ 0.46
TNFSF13-201ENST00000338784 UVSSAQ2YD98 709 aa17.95■□□□□ 0.46
TNFSF13-201ENST00000338784 UBE2Q2Q8WVN8 375 aa17.95■□□□□ 0.46
TNFSF13-201ENST00000338784 DTNBO60941 627 aa17.94■□□□□ 0.46
TNFSF13-201ENST00000338784 MCM5P33992 734 aa17.94■□□□□ 0.46
TNFSF13-201ENST00000338784 COL9A3Q14050 684 aaPredicted RBP17.94■□□□□ 0.46
TNFSF13-201ENST00000338784 DBNDD2Q9BQY9 259 aa17.94■□□□□ 0.46
TNFSF13-201ENST00000338784 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.94■□□□□ 0.46
TNFSF13-201ENST00000338784 ZKSCAN5Q9Y2L8 839 aa17.94■□□□□ 0.46
TNFSF13-201ENST00000338784 TAF6LQ9Y6J9 622 aa17.94■□□□□ 0.46
TNFSF13-201ENST00000338784 ZNF500O60304 480 aaPredicted RBP17.93■□□□□ 0.46
TNFSF13-201ENST00000338784 TOB2Q14106 344 aaPredicted RBP17.93■□□□□ 0.46
TNFSF13-201ENST00000338784 LMBR1LQ6UX01 489 aa17.93■□□□□ 0.46
TNFSF13-201ENST00000338784 BRINP3Q76B58 766 aa17.93■□□□□ 0.46
TNFSF13-201ENST00000338784 DNAJC2Q99543 621 aaKnown RBP17.93■□□□□ 0.46
TNFSF13-201ENST00000338784 HAUS7Q99871 368 aa17.93■□□□□ 0.46
TNFSF13-201ENST00000338784 PKD1L3Q7Z443 1732 aa17.93■□□□□ 0.46
TNFSF13-201ENST00000338784 OFD1O75665 1012 aa17.93■□□□□ 0.46
TNFSF13-201ENST00000338784 TCEANC2Q96MN5 208 aa17.93■□□□□ 0.46
TNFSF13-201ENST00000338784 H7C1W4 665 aa17.92■□□□□ 0.46
TNFSF13-201ENST00000338784 PCDH11XQ9BZA7 1347 aa17.92■□□□□ 0.46
TNFSF13-201ENST00000338784 PCDH11YQ9BZA8 1340 aa17.92■□□□□ 0.46
TNFSF13-201ENST00000338784 NBPF26B4DH59 902 aa17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 NBPF14Q5TI25 921 aa17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 NBPF10Q6P3W6 841 aaKnown RBP17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 NBPF15Q8N660 670 aa17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 NDUFB9Q9Y6M9 179 aa17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 U3KPZ7 1027 aaPredicted RBP17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 FOXO4P98177 505 aa17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 MCMDC2Q4G0Z9 681 aa17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 ZCRB1Q8TBF4 217 aaKnown RBP17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 CHMP3Q9Y3E7 222 aa17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 ABCA3Q99758 1704 aa17.91■□□□□ 0.46
TNFSF13-201ENST00000338784 KRT85P78386 507 aa17.9■□□□□ 0.46
TNFSF13-201ENST00000338784 CDC37L1Q7L3B6 337 aa17.9■□□□□ 0.46
TNFSF13-201ENST00000338784 NEK1Q96PY6 1258 aa17.9■□□□□ 0.46
TNFSF13-201ENST00000338784 CWC25Q9NXE8 425 aaPredicted RBP17.9■□□□□ 0.46
TNFSF13-201ENST00000338784 ERVV-2B6SEH9 535 aa17.9■□□□□ 0.46
TNFSF13-201ENST00000338784 DDX46Q7L014 1031 aaKnown RBP17.9■□□□□ 0.46
TNFSF13-201ENST00000338784 SLAIN2Q9P270 581 aa17.9■□□□□ 0.46
TNFSF13-201ENST00000338784 ZNF609O15014 1411 aa17.89■□□□□ 0.46
TNFSF13-201ENST00000338784 SOS2Q07890 1332 aaPredicted RBP17.89■□□□□ 0.45
TNFSF13-201ENST00000338784 WDR17Q8IZU2 1322 aa17.89■□□□□ 0.45
TNFSF13-201ENST00000338784 NHSL1Q5SYE7 1610 aa17.89■□□□□ 0.45
TNFSF13-201ENST00000338784 ARFGEF2Q9Y6D5 1785 aa17.89■□□□□ 0.45
TNFSF13-201ENST00000338784 PTMAP06454 111 aaKnown RBP17.89■□□□□ 0.45
TNFSF13-201ENST00000338784 GLI3P10071 1580 aa17.89■□□□□ 0.45
TNFSF13-201ENST00000338784 TTLL7Q6ZT98 887 aa17.89■□□□□ 0.45
TNFSF13-201ENST00000338784 TOM1L2Q6ZVM7 507 aa17.89■□□□□ 0.45
TNFSF13-201ENST00000338784 KBTBD3Q8NAB2 608 aa17.89■□□□□ 0.45
TNFSF13-201ENST00000338784 HCLS1P14317 486 aaPredicted RBP17.88■□□□□ 0.45
TNFSF13-201ENST00000338784 STK3Q13188 491 aa17.88■□□□□ 0.45
TNFSF13-201ENST00000338784 CCDC129Q6ZRS4 1044 aa17.88■□□□□ 0.45
TNFSF13-201ENST00000338784 ATG9AQ7Z3C6 839 aa17.88■□□□□ 0.45
TNFSF13-201ENST00000338784 FERMT3Q86UX7 667 aa17.88■□□□□ 0.45
TNFSF13-201ENST00000338784 SEC62Q99442 399 aaKnown RBP17.88■□□□□ 0.45
TNFSF13-201ENST00000338784 GPR108Q9NPR9 543 aa17.88■□□□□ 0.45
TNFSF13-201ENST00000338784 ELP1O95163 1332 aa17.88■□□□□ 0.45
TNFSF13-201ENST00000338784 TPM2P07951 284 aa17.88■□□□□ 0.45
TNFSF13-201ENST00000338784 NEUROD6Q96NK8 337 aa17.88■□□□□ 0.45
TNFSF13-201ENST00000338784 PRDM11Q9NQV5 511 aa17.88■□□□□ 0.45
TNFSF13-201ENST00000338784 TCHHQ07283 1943 aa17.87■□□□□ 0.45
TNFSF13-201ENST00000338784 SH3TC1Q8TE82 1336 aa17.87■□□□□ 0.45
TNFSF13-201ENST00000338784 PHLPP1O60346 1717 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms