RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 MPNDQ8N594 471 aa15.11■□□□□ 0.01
CSMD2-202ENST00000338325 AOC2O75106 756 aa15.1■□□□□ 0.01
CSMD2-202ENST00000338325 CELF2O95319 508 aaKnown RBP15.1■□□□□ 0.01
CSMD2-202ENST00000338325 SAPCD2Q86UD0 394 aa15.1■□□□□ 0.01
CSMD2-202ENST00000338325 NLRP10Q86W26 655 aa15.1■□□□□ 0.01
CSMD2-202ENST00000338325 BABAM1Q9NWV8 329 aa15.1■□□□□ 0.01
CSMD2-202ENST00000338325 HCLS1P14317 486 aaPredicted RBP15.09■□□□□ 0.01
CSMD2-202ENST00000338325 TNIP1Q15025 636 aa15.09■□□□□ 0.01
CSMD2-202ENST00000338325 DDX46Q7L014 1031 aaKnown RBP15.09■□□□□ 0.01
CSMD2-202ENST00000338325 HHIPL1Q96JK4 782 aa15.09■□□□□ 0.01
CSMD2-202ENST00000338325 BCL2L13Q9BXK5 485 aa15.09■□□□□ 0.01
CSMD2-202ENST00000338325 GLIS2Q9BZE0 524 aaPredicted RBP15.09■□□□□ 0.01
CSMD2-202ENST00000338325 PGAP2Q9UHJ9 254 aa15.09■□□□□ 0.01
CSMD2-202ENST00000338325 RAD17O75943 681 aa15.08■□□□□ 0.01
CSMD2-202ENST00000338325 RIPK4P57078 832 aa15.08■□□□□ 0.01
CSMD2-202ENST00000338325 GRAPQ13588 217 aa15.08■□□□□ 0.01
CSMD2-202ENST00000338325 FAM161AQ3B820 660 aa15.08■□□□□ 0.01
CSMD2-202ENST00000338325 COPS6Q7L5N1 327 aa15.08■□□□□ 0.01
CSMD2-202ENST00000338325 GRAPLQ8TC17 118 aaPredicted RBP15.08■□□□□ 0.01
CSMD2-202ENST00000338325 ZC3H15Q8WU90 426 aaKnown RBP15.08■□□□□ 0.01
CSMD2-202ENST00000338325 AIMP1Q12904 312 aaKnown RBP15.07■□□□□ 0
CSMD2-202ENST00000338325 TCIRG1Q13488 830 aa15.07■□□□□ 0
CSMD2-202ENST00000338325 XAGE3Q8WTP9 111 aa15.07■□□□□ 0
CSMD2-202ENST00000338325 NECTIN2Q92692 538 aa15.07■□□□□ 0
CSMD2-202ENST00000338325 TRMT112Q9UI30 125 aaKnown RBP15.07■□□□□ 0
CSMD2-202ENST00000338325 TSKSQ9UJT2 592 aa15.07■□□□□ 0
CSMD2-202ENST00000338325 CASP8AP2Q9UKL3 1982 aa15.07■□□□□ 0
CSMD2-202ENST00000338325 SH3TC1Q8TE82 1336 aa15.07■□□□□ 0
CSMD2-202ENST00000338325 CA12O43570 354 aa15.07■□□□□ 0
CSMD2-202ENST00000338325 HIRAP54198 1017 aaPredicted RBP15.07■□□□□ 0
CSMD2-202ENST00000338325 LMOD3Q0VAK6 560 aa15.07■□□□□ 0
CSMD2-202ENST00000338325 TMC4Q7Z404 712 aa15.07■□□□□ 0
CSMD2-202ENST00000338325 TRPM4Q8TD43 1214 aa15.07■□□□□ 0
CSMD2-202ENST00000338325 CCDC85CA6NKD9 419 aa15.06■□□□□ 0
CSMD2-202ENST00000338325 YDJCA8MPS7 323 aa15.06■□□□□ 0
CSMD2-202ENST00000338325 BRPF1P55201 1214 aaPredicted RBP15.06■□□□□ 0
CSMD2-202ENST00000338325 CDC37L1Q7L3B6 337 aa15.06■□□□□ 0
CSMD2-202ENST00000338325 ZNF408Q9H9D4 720 aa15.06■□□□□ 0
CSMD2-202ENST00000338325 CNOT7Q9UIV1 285 aaKnown RBP15.06■□□□□ 0
CSMD2-202ENST00000338325 TMPOP42166 694 aaKnown RBP15.05■□□□□ -0
CSMD2-202ENST00000338325 POLR2AP24928 1970 aaKnown RBP15.05■□□□□ -0
CSMD2-202ENST00000338325 SHTN1A0MZ66 631 aa15.04■□□□□ -0
CSMD2-202ENST00000338325 H7C1D1 291 aa15.04■□□□□ -0
CSMD2-202ENST00000338325 MICALL2Q8IY33 904 aa15.04■□□□□ -0
CSMD2-202ENST00000338325 MLLT1Q03111 559 aaPredicted RBP15.03■□□□□ -0
CSMD2-202ENST00000338325 COL4A1P02462 1669 aa15.03■□□□□ -0
CSMD2-202ENST00000338325 RGS19P49795 217 aa15.02■□□□□ -0
CSMD2-202ENST00000338325 DPF2Q92785 391 aa15.02■□□□□ -0
CSMD2-202ENST00000338325 MCOLN1Q9GZU1 580 aa15.02■□□□□ -0
CSMD2-202ENST00000338325 CHPF2Q9P2E5 772 aa15.02■□□□□ -0
CSMD2-202ENST00000338325 PSMD14O00487 310 aa15.02□□□□□ -0.01
CSMD2-202ENST00000338325 NOGQ13253 232 aa15.02□□□□□ -0.01
CSMD2-202ENST00000338325 KRT24Q2M2I5 525 aa15.02□□□□□ -0.01
CSMD2-202ENST00000338325 WASHC4Q2M389 1173 aa15.02□□□□□ -0.01
CSMD2-202ENST00000338325 USP48Q86UV5 1035 aa15.02□□□□□ -0.01
CSMD2-202ENST00000338325 PLBD2Q8NHP8 589 aa15.02□□□□□ -0.01
CSMD2-202ENST00000338325 ZBTB12Q9Y330 459 aaPredicted RBP15.02□□□□□ -0.01
CSMD2-202ENST00000338325 CHL1O00533 1208 aa15.01□□□□□ -0.01
CSMD2-202ENST00000338325 SLC34A2O95436 690 aa15.01□□□□□ -0.01
CSMD2-202ENST00000338325 HUNKP57058 714 aa15.01□□□□□ -0.01
CSMD2-202ENST00000338325 CELF1Q92879 486 aaKnown RBP15.01□□□□□ -0.01
CSMD2-202ENST00000338325 ZNF428Q96B54 188 aa15.01□□□□□ -0.01
CSMD2-202ENST00000338325 DBNDD1Q9H9R9 158 aa15.01□□□□□ -0.01
CSMD2-202ENST00000338325 NSFL1CQ9UNZ2 370 aaKnown RBP15.01□□□□□ -0.01
CSMD2-202ENST00000338325 SCN9AQ15858 1988 aa15□□□□□ -0.01
CSMD2-202ENST00000338325 AKAP11Q9UKA4 1901 aa15□□□□□ -0.01
CSMD2-202ENST00000338325 PSME4Q14997 1843 aa15□□□□□ -0.01
CSMD2-202ENST00000338325 RPS12P25398 132 aaKnown RBP15□□□□□ -0.01
CSMD2-202ENST00000338325 RALBP1Q15311 655 aa15□□□□□ -0.01
CSMD2-202ENST00000338325 SF3B3Q15393 1217 aaKnown RBP15□□□□□ -0.01
CSMD2-202ENST00000338325 HDGFL1Q5TGJ6 251 aa15□□□□□ -0.01
CSMD2-202ENST00000338325 SAMD7Q7Z3H4 446 aa15□□□□□ -0.01
CSMD2-202ENST00000338325 ISCA1Q9BUE6 129 aa15□□□□□ -0.01
CSMD2-202ENST00000338325 C6orf229H3BNL8 230 aa14.99□□□□□ -0.01
CSMD2-202ENST00000338325 RIMBP2O15034 1052 aa14.99□□□□□ -0.01
CSMD2-202ENST00000338325 NEUROD2Q15784 382 aa14.99□□□□□ -0.01
CSMD2-202ENST00000338325 TBC1D10BQ4KMP7 808 aaPredicted RBP14.99□□□□□ -0.01
CSMD2-202ENST00000338325 ANKRD13DQ6ZTN6 518 aa14.99□□□□□ -0.01
CSMD2-202ENST00000338325 KRT26Q7Z3Y9 468 aa14.99□□□□□ -0.01
CSMD2-202ENST00000338325 FAM89AQ96GI7 184 aa14.99□□□□□ -0.01
CSMD2-202ENST00000338325 ZIC5Q96T25 663 aa14.99□□□□□ -0.01
CSMD2-202ENST00000338325 ECE2O60344 883 aa14.98□□□□□ -0.01
CSMD2-202ENST00000338325 HOXB7P09629 217 aa14.98□□□□□ -0.01
CSMD2-202ENST00000338325 GPSM2P81274 684 aa14.98□□□□□ -0.01
CSMD2-202ENST00000338325 DGKZQ13574 1117 aa14.98□□□□□ -0.01
CSMD2-202ENST00000338325 DLK2Q6UY11 383 aa14.98□□□□□ -0.01
CSMD2-202ENST00000338325 CCDC146Q8IYE0 955 aa14.98□□□□□ -0.01
CSMD2-202ENST00000338325 CFAP44Q96MT7 982 aa14.98□□□□□ -0.01
CSMD2-202ENST00000338325 EYA3Q99504 573 aa14.98□□□□□ -0.01
CSMD2-202ENST00000338325 GBA2Q9HCG7 927 aaPredicted RBP14.98□□□□□ -0.01
CSMD2-202ENST00000338325 POLLQ9UGP5 575 aa14.98□□□□□ -0.01
CSMD2-202ENST00000338325 LAS1LQ9Y4W2 734 aaKnown RBP14.98□□□□□ -0.01
CSMD2-202ENST00000338325 RTL9Q8NET4 1388 aa14.98□□□□□ -0.01
CSMD2-202ENST00000338325 ATP5J2-PTCD1G3V325 749 aa14.97□□□□□ -0.01
CSMD2-202ENST00000338325 EGFRP00533 1210 aa14.97□□□□□ -0.01
CSMD2-202ENST00000338325 RGMBQ6NW40 437 aa14.97□□□□□ -0.01
CSMD2-202ENST00000338325 C2orf69Q8N8R5 385 aa14.97□□□□□ -0.01
CSMD2-202ENST00000338325 DCPSQ96C86 337 aaKnown RBP14.97□□□□□ -0.01
CSMD2-202ENST00000338325 DBF4Q9UBU7 674 aaPredicted RBP14.97□□□□□ -0.01
CSMD2-202ENST00000338325 FAM155AB1AL88 458 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms