RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 TJP1Q07157 1748 aa27.81■■■□□ 2.04
CLPTM1-201ENST00000337392 NUP188Q5SRE5 1749 aa27.81■■■□□ 2.04
CLPTM1-201ENST00000337392 MCM2P49736 904 aa27.81■■■□□ 2.04
CLPTM1-201ENST00000337392 CLEC17AQ6ZS10 378 aa27.81■■■□□ 2.04
CLPTM1-201ENST00000337392 CCDC83Q8IWF9 413 aa27.81■■■□□ 2.04
CLPTM1-201ENST00000337392 CCDC191Q8NCU4 936 aa27.81■■■□□ 2.04
CLPTM1-201ENST00000337392 TBC1D2BQ9UPU7 963 aa27.81■■■□□ 2.04
CLPTM1-201ENST00000337392 EP400Q96L91 3159 aa27.81■■■□□ 2.04
CLPTM1-201ENST00000337392 ERBB4Q15303 1308 aa27.8■■■□□ 2.04
CLPTM1-201ENST00000337392 GPT2Q8TD30 523 aa27.8■■■□□ 2.04
CLPTM1-201ENST00000337392 GOLIM4O00461 696 aa27.8■■■□□ 2.04
CLPTM1-201ENST00000337392 SLC27A2O14975 620 aa27.8■■■□□ 2.04
CLPTM1-201ENST00000337392 MAP4K1Q92918 833 aa27.8■■■□□ 2.04
CLPTM1-201ENST00000337392 IL17RAQ96F46 866 aa27.8■■■□□ 2.04
CLPTM1-201ENST00000337392 PAPPAQ13219 1627 aa27.79■■■□□ 2.04
CLPTM1-201ENST00000337392 PLEKHG2Q9H7P9 1386 aa27.79■■■□□ 2.04
CLPTM1-201ENST00000337392 ATP5JP18859 108 aa27.79■■■□□ 2.04
CLPTM1-201ENST00000337392 BRD1O95696 1058 aa27.79■■■□□ 2.04
CLPTM1-201ENST00000337392 TCIRG1Q13488 830 aa27.79■■■□□ 2.04
CLPTM1-201ENST00000337392 SNRKQ9NRH2 765 aa27.79■■■□□ 2.04
CLPTM1-201ENST00000337392 ROBO1Q9Y6N7 1651 aa27.78■■■□□ 2.04
CLPTM1-201ENST00000337392 PDRG1Q9NUG6 133 aa27.78■■■□□ 2.04
CLPTM1-201ENST00000337392 A0A0G2JLW4 131 aa27.78■■■□□ 2.04
CLPTM1-201ENST00000337392 FAM177BA6PVY3 158 aa27.78■■■□□ 2.04
CLPTM1-201ENST00000337392 PIP4K2BP78356 416 aa27.77■■■□□ 2.04
CLPTM1-201ENST00000337392 ST3GAL1Q11201 340 aa27.77■■■□□ 2.04
CLPTM1-201ENST00000337392 ISCA1Q9BUE6 129 aa27.77■■■□□ 2.04
CLPTM1-201ENST00000337392 EXOC5O00471 708 aa27.77■■■□□ 2.04
CLPTM1-201ENST00000337392 ADORA1P30542 326 aa27.77■■■□□ 2.04
CLPTM1-201ENST00000337392 ZNF609O15014 1411 aa27.77■■■□□ 2.04
CLPTM1-201ENST00000337392 GRPEL1Q9HAV7 217 aa27.76■■■□□ 2.03
CLPTM1-201ENST00000337392 LIMCH1Q9UPQ0 1083 aa27.76■■■□□ 2.03
CLPTM1-201ENST00000337392 ITGB4P16144 1822 aa27.76■■■□□ 2.03
CLPTM1-201ENST00000337392 A0A1B0GUL7 405 aa27.75■■■□□ 2.03
CLPTM1-201ENST00000337392 VPS53Q5VIR6 699 aa27.75■■■□□ 2.03
CLPTM1-201ENST00000337392 ME3Q16798 604 aa27.75■■■□□ 2.03
CLPTM1-201ENST00000337392 KIF6Q6ZMV9 814 aa27.75■■■□□ 2.03
CLPTM1-201ENST00000337392 RPAP1Q9BWH6 1393 aaPredicted RBP27.75■■■□□ 2.03
CLPTM1-201ENST00000337392 MED23Q9ULK4 1368 aa27.75■■■□□ 2.03
CLPTM1-201ENST00000337392 EYA2O00167 538 aa27.74■■■□□ 2.03
CLPTM1-201ENST00000337392 TAF5LO75529 589 aa27.74■■■□□ 2.03
CLPTM1-201ENST00000337392 KLHL40Q2TBA0 621 aa27.74■■■□□ 2.03
CLPTM1-201ENST00000337392 HSP90AB3PQ58FF7 597 aa27.74■■■□□ 2.03
CLPTM1-201ENST00000337392 L1TD1Q5T7N2 865 aaKnown RBP27.74■■■□□ 2.03
CLPTM1-201ENST00000337392 PI16Q6UXB8 463 aa27.74■■■□□ 2.03
CLPTM1-201ENST00000337392 INTS4Q96HW7 963 aaKnown RBP27.74■■■□□ 2.03
CLPTM1-201ENST00000337392 ZSWIM6Q9HCJ5 1215 aa27.74■■■□□ 2.03
CLPTM1-201ENST00000337392 TPCN1Q9ULQ1 816 aa27.74■■■□□ 2.03
CLPTM1-201ENST00000337392 CYP46A1Q9Y6A2 500 aa27.74■■■□□ 2.03
CLPTM1-201ENST00000337392 TCHHQ07283 1943 aa27.73■■■□□ 2.03
CLPTM1-201ENST00000337392 STARD3NLO95772 234 aa27.73■■■□□ 2.03
CLPTM1-201ENST00000337392 CYP19A1P11511 503 aaPredicted RBP27.73■■■□□ 2.03
CLPTM1-201ENST00000337392 ZKSCAN1P17029 563 aaPredicted RBP27.73■■■□□ 2.03
CLPTM1-201ENST00000337392 STK3Q13188 491 aa27.73■■■□□ 2.03
CLPTM1-201ENST00000337392 HAUS7Q99871 368 aa27.73■■■□□ 2.03
CLPTM1-201ENST00000337392 LRRC2Q9BYS8 371 aa27.73■■■□□ 2.03
CLPTM1-201ENST00000337392 SKOR2Q2VWA4 1001 aaPredicted RBP27.72■■■□□ 2.03
CLPTM1-201ENST00000337392 CCDC57Q2TAC2 916 aa27.72■■■□□ 2.03
CLPTM1-201ENST00000337392 DISP2A7MBM2 1401 aa27.71■■■□□ 2.03
CLPTM1-201ENST00000337392 BCL9O00512 1426 aa27.71■■■□□ 2.03
CLPTM1-201ENST00000337392 EPB41L2O43491 1005 aaKnown RBP27.71■■■□□ 2.03
CLPTM1-201ENST00000337392 GADD45BO75293 160 aaPredicted RBP27.71■■■□□ 2.03
CLPTM1-201ENST00000337392 FKBP4Q02790 459 aaKnown RBP eCLIP27.71■■■□□ 2.03
CLPTM1-201ENST00000337392 KCNQ4P56696 695 aa27.7■■■□□ 2.02
CLPTM1-201ENST00000337392 SCARF1Q14162 830 aa27.7■■■□□ 2.02
CLPTM1-201ENST00000337392 GREM2Q9H772 168 aa27.7■■■□□ 2.02
CLPTM1-201ENST00000337392 HIP1O00291 1037 aa27.7■■■□□ 2.02
CLPTM1-201ENST00000337392 IL15P40933 162 aaPredicted RBP27.7■■■□□ 2.02
CLPTM1-201ENST00000337392 PAG1Q9NWQ8 432 aa27.7■■■□□ 2.02
CLPTM1-201ENST00000337392 COL16A1Q07092 1604 aaPredicted RBP27.69■■■□□ 2.02
CLPTM1-201ENST00000337392 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.69■■■□□ 2.02
CLPTM1-201ENST00000337392 SYT1P21579 422 aa27.69■■■□□ 2.02
CLPTM1-201ENST00000337392 MAP3K15Q6ZN16 1313 aa27.69■■■□□ 2.02
CLPTM1-201ENST00000337392 TMEM63CQ9P1W3 806 aa27.69■■■□□ 2.02
CLPTM1-201ENST00000337392 GJB2P29033 226 aa27.68■■■□□ 2.02
CLPTM1-201ENST00000337392 ZSCAN23Q3MJ62 389 aa27.68■■■□□ 2.02
CLPTM1-201ENST00000337392 SMIM5Q71RC9 77 aa27.68■■■□□ 2.02
CLPTM1-201ENST00000337392 PPFIA3O75145 1194 aa27.68■■■□□ 2.02
CLPTM1-201ENST00000337392 TAF7LQ5H9L4 462 aa27.68■■■□□ 2.02
CLPTM1-201ENST00000337392 GIGYF2Q6Y7W6 1299 aaKnown RBP27.68■■■□□ 2.02
CLPTM1-201ENST00000337392 NLRP10Q86W26 655 aa27.68■■■□□ 2.02
CLPTM1-201ENST00000337392 KCNB2Q92953 911 aa27.68■■■□□ 2.02
CLPTM1-201ENST00000337392 SNAP23O00161 211 aa27.67■■■□□ 2.02
CLPTM1-201ENST00000337392 SMC3Q9UQE7 1217 aa27.67■■■□□ 2.02
CLPTM1-201ENST00000337392 IFIT1P09914 478 aaKnown RBP27.67■■■□□ 2.02
CLPTM1-201ENST00000337392 CYP21A2P08686 494 aa27.66■■■□□ 2.02
CLPTM1-201ENST00000337392 KBTBD3Q8NAB2 608 aa27.66■■■□□ 2.02
CLPTM1-201ENST00000337392 CEP126Q9P2H0 1117 aa27.66■■■□□ 2.02
CLPTM1-201ENST00000337392 CNPY2Q9Y2B0 182 aa27.66■■■□□ 2.02
CLPTM1-201ENST00000337392 MRE11P49959 708 aa27.65■■■□□ 2.02
CLPTM1-201ENST00000337392 ZBTB38Q8NAP3 1195 aaPredicted RBP27.65■■■□□ 2.02
CLPTM1-201ENST00000337392 KCNQ2O43526 872 aa27.65■■■□□ 2.02
CLPTM1-201ENST00000337392 BLOC1S2Q6QNY1 142 aa27.65■■■□□ 2.02
CLPTM1-201ENST00000337392 TRMT112Q9UI30 125 aaKnown RBP27.65■■■□□ 2.02
CLPTM1-201ENST00000337392 UBN2Q6ZU65 1347 aa27.65■■■□□ 2.02
CLPTM1-201ENST00000337392 TOB2Q14106 344 aaPredicted RBP27.64■■■□□ 2.02
CLPTM1-201ENST00000337392 VSIG10Q8N0Z9 540 aa27.64■■■□□ 2.02
CLPTM1-201ENST00000337392 HELBQ8NG08 1087 aaPredicted RBP27.64■■■□□ 2.02
CLPTM1-201ENST00000337392 XAGE2Q96GT9 111 aa27.64■■■□□ 2.02
CLPTM1-201ENST00000337392 PCCAP05165 728 aaPredicted RBP27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms