RNA–Protein interactions for RNA: ENST00000337109.8

MRPL35-202, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MRPL35, Length 3,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-202ENST00000337109 LAMB1P07942 1786 aa6.39□□□□□ -1.39
MRPL35-202ENST00000337109 RBM43Q6ZSC3 357 aaKnown RBP6.39□□□□□ -1.39
MRPL35-202ENST00000337109 TAF6LQ9Y6J9 622 aa6.39□□□□□ -1.39
MRPL35-202ENST00000337109 DDX60LQ5H9U9 1706 aaKnown RBP6.39□□□□□ -1.39
MRPL35-202ENST00000337109 A0A0D9SFI3 127 aa6.38□□□□□ -1.39
MRPL35-202ENST00000337109 TNNI3KQ59H18 835 aa6.38□□□□□ -1.39
MRPL35-202ENST00000337109 FPGT-TNNI3KV9GXZ4 949 aa6.38□□□□□ -1.39
MRPL35-202ENST00000337109 DDX58O95786 925 aaKnown RBP6.38□□□□□ -1.39
MRPL35-202ENST00000337109 ZC3H6P61129 1189 aaKnown RBP6.38□□□□□ -1.39
MRPL35-202ENST00000337109 VGLL2Q8N8G2 317 aa6.38□□□□□ -1.39
MRPL35-202ENST00000337109 ZNF512BQ96KM6 892 aaPredicted RBP6.38□□□□□ -1.39
MRPL35-202ENST00000337109 CDHR2Q9BYE9 1310 aa6.38□□□□□ -1.39
MRPL35-202ENST00000337109 ZNF646O15015 1829 aaPredicted RBP6.38□□□□□ -1.39
MRPL35-202ENST00000337109 SLC27A2O14975 620 aa6.38□□□□□ -1.39
MRPL35-202ENST00000337109 CHRM1P11229 460 aaPredicted RBP6.38□□□□□ -1.39
MRPL35-202ENST00000337109 ZNF589Q86UQ0 364 aaPredicted RBP6.38□□□□□ -1.39
MRPL35-202ENST00000337109 LTBP1Q14766 1721 aa6.38□□□□□ -1.39
MRPL35-202ENST00000337109 HIP1O00291 1037 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 ATF3P18847 181 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 LRSAM1Q6UWE0 723 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 CLASRPQ8N2M8 674 aaKnown RBP6.37□□□□□ -1.39
MRPL35-202ENST00000337109 FAM227BQ96M60 508 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 SLC4A9Q96Q91 983 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 LIMCH1Q9UPQ0 1083 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 MTMR6Q9Y217 621 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 ELP1O95163 1332 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 NID2Q14112 1375 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 EXOSC10Q01780 885 aaKnown RBP6.37□□□□□ -1.39
MRPL35-202ENST00000337109 NMIQ13287 307 aaPredicted RBP6.37□□□□□ -1.39
MRPL35-202ENST00000337109 CREB3L3Q68CJ9 461 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 RAPGEF4Q8WZA2 1011 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 CHAMP1Q96JM3 812 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 RBSNQ9H1K0 784 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 CARMIL3Q8ND23 1372 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 ME3Q16798 604 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 CCDC191Q8NCU4 936 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 SMARCC2Q8TAQ2 1214 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 CABLES1Q8TDN4 633 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 TPCN1Q9ULQ1 816 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 CDK5RAP2Q96SN8 1893 aa6.37□□□□□ -1.39
MRPL35-202ENST00000337109 ANO2Q9NQ90 1003 aa6.36□□□□□ -1.39
MRPL35-202ENST00000337109 SH2B1Q9NRF2 756 aaPredicted RBP6.36□□□□□ -1.39
MRPL35-202ENST00000337109 HMG20BQ9P0W2 317 aa6.36□□□□□ -1.39
MRPL35-202ENST00000337109 SLAIN2Q9P270 581 aa6.36□□□□□ -1.39
MRPL35-202ENST00000337109 FOCADQ5VW36 1801 aa6.36□□□□□ -1.39
MRPL35-202ENST00000337109 RTL9Q8NET4 1388 aa6.36□□□□□ -1.39
MRPL35-202ENST00000337109 APBB1O00213 710 aa6.36□□□□□ -1.39
MRPL35-202ENST00000337109 SYT1P21579 422 aa6.36□□□□□ -1.39
MRPL35-202ENST00000337109 ADD1P35611 737 aaKnown RBP6.36□□□□□ -1.39
MRPL35-202ENST00000337109 LRRC37AA6NMS7 1700 aa6.36□□□□□ -1.39
MRPL35-202ENST00000337109 ZSCAN22P10073 491 aaPredicted RBP6.36□□□□□ -1.39
MRPL35-202ENST00000337109 RPS6KB1P23443 525 aa6.36□□□□□ -1.39
MRPL35-202ENST00000337109 MCCP23508 829 aa6.36□□□□□ -1.39
MRPL35-202ENST00000337109 ZCRB1Q8TBF4 217 aaKnown RBP6.36□□□□□ -1.39
MRPL35-202ENST00000337109 RILPL2Q969X0 211 aa6.36□□□□□ -1.39
MRPL35-202ENST00000337109 RBM8AQ9Y5S9 174 aaKnown RBP6.36□□□□□ -1.39
MRPL35-202ENST00000337109 PRIM1P49642 420 aaKnown RBP6.35□□□□□ -1.39
MRPL35-202ENST00000337109 TTLL7Q6ZT98 887 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 AACSQ86V21 672 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 KLHDC4Q8TBB5 520 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 ZSCAN31Q96LW9 406 aaPredicted RBP6.35□□□□□ -1.39
MRPL35-202ENST00000337109 MYD88Q99836 296 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 WDR33Q9C0J8 1336 aaKnown RBP6.35□□□□□ -1.39
MRPL35-202ENST00000337109 MYH13Q9UKX3 1938 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 CCDC173Q0VFZ6 552 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 TFCP2Q12800 502 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 ZMYM1Q5SVZ6 1142 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 MCTP1Q6DN14 999 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 CWC27Q6UX04 472 aaKnown RBP6.35□□□□□ -1.39
MRPL35-202ENST00000337109 STOX1Q6ZVD7 989 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 UPF3BQ9BZI7 483 aaKnown RBP6.35□□□□□ -1.39
MRPL35-202ENST00000337109 C9orf78Q9NZ63 289 aaPredicted RBP6.35□□□□□ -1.39
MRPL35-202ENST00000337109 NEDD4P46934 1319 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 ZNF335Q9H4Z2 1342 aaPredicted RBP6.35□□□□□ -1.39
MRPL35-202ENST00000337109 MAP4K4O95819 1239 aaPredicted RBP6.35□□□□□ -1.39
MRPL35-202ENST00000337109 MBD3O95983 291 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 F13A1P00488 732 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 IL2RBP14784 551 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 CHRNA2Q15822 529 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 TAF7LQ5H9L4 462 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 KBTBD3Q8NAB2 608 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 DSCC1Q9BVC3 393 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 FOXD4L1Q9NU39 408 aa6.35□□□□□ -1.39
MRPL35-202ENST00000337109 BTAF1O14981 1849 aa6.34□□□□□ -1.39
MRPL35-202ENST00000337109 ZMYM6O95789 1325 aa6.34□□□□□ -1.39
MRPL35-202ENST00000337109 TRIM6-TRIM34B2RNG4 842 aa6.34□□□□□ -1.39
MRPL35-202ENST00000337109 ZNF500O60304 480 aaPredicted RBP6.34□□□□□ -1.39
MRPL35-202ENST00000337109 GADD45BO75293 160 aaPredicted RBP6.34□□□□□ -1.39
MRPL35-202ENST00000337109 RUFY2Q8WXA3 655 aa6.34□□□□□ -1.39
MRPL35-202ENST00000337109 WDR19Q8NEZ3 1342 aa6.34□□□□□ -1.39
MRPL35-202ENST00000337109 PCCAP05165 728 aaPredicted RBP6.34□□□□□ -1.39
MRPL35-202ENST00000337109 USP48Q86UV5 1035 aa6.34□□□□□ -1.39
MRPL35-202ENST00000337109 HELLSQ9NRZ9 838 aa6.34□□□□□ -1.39
MRPL35-202ENST00000337109 NLRP2Q9NX02 1062 aa6.34□□□□□ -1.39
MRPL35-202ENST00000337109 RIPOR2Q9Y4F9 1068 aa6.34□□□□□ -1.39
MRPL35-202ENST00000337109 STX6O43752 255 aa6.34□□□□□ -1.4
MRPL35-202ENST00000337109 CTDNEP1O95476 244 aa6.34□□□□□ -1.4
MRPL35-202ENST00000337109 CHGBP05060 677 aa6.34□□□□□ -1.4
MRPL35-202ENST00000337109 TCIRG1Q13488 830 aa6.34□□□□□ -1.4
MRPL35-202ENST00000337109 C14orf37Q86TY3 774 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms