RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ANKRD24Q8TF21 1146 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 CTAGE15A4D2H0 777 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 TSPY2A6NKD2 308 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 PTCD1O75127 700 aaKnown RBP14.93□□□□□ -0.02
HLCS-201ENST00000336648 CTAGE8P0CG41 777 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 LRSAM1Q6UWE0 723 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 CTAGE6Q86UF2 777 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 CTAGE4Q8IX94 777 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 SERPINA10Q9UK55 444 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 TBC1D9Q6ZT07 1266 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 SSX2IPQ9Y2D8 614 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 SYKP43405 635 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 CCT2P78371 535 aaKnown RBP14.93□□□□□ -0.02
HLCS-201ENST00000336648 PRPF4BQ13523 1007 aaKnown RBP14.93□□□□□ -0.02
HLCS-201ENST00000336648 ZGPATQ8N5A5 531 aaKnown RBP14.93□□□□□ -0.02
HLCS-201ENST00000336648 ZSCAN22P10073 491 aaPredicted RBP14.92□□□□□ -0.02
HLCS-201ENST00000336648 PPP1R14CQ8TAE6 165 aa14.92□□□□□ -0.02
HLCS-201ENST00000336648 FMNL3Q8IVF7 1028 aa14.92□□□□□ -0.02
HLCS-201ENST00000336648 KRT222Q8N1A0 295 aa14.92□□□□□ -0.02
HLCS-201ENST00000336648 MIS18AQ9NYP9 233 aa14.92□□□□□ -0.02
HLCS-201ENST00000336648 TRIM27P14373 513 aa14.92□□□□□ -0.02
HLCS-201ENST00000336648 KIF4AO95239 1232 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 PHF8Q9UPP1 1060 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 HDAC1Q13547 482 aaPredicted RBP14.91□□□□□ -0.02
HLCS-201ENST00000336648 ATP2A1O14983 1001 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 DNA2P51530 1060 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 ZNF526Q8TF50 670 aaPredicted RBP14.91□□□□□ -0.02
HLCS-201ENST00000336648 TBC1D32Q96NH3 1257 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 SPAG5Q96R06 1193 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 IFNL2Q8IZJ0 200 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 ARFGAP3Q9NP61 516 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 NCOA1Q15788 1441 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 TACC1O75410 805 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 KRT13P13646 458 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 MXRA7P84157 204 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 TTC31Q49AM3 519 aaPredicted RBP14.91□□□□□ -0.02
HLCS-201ENST00000336648 THUMPD2Q9BTF0 503 aaKnown RBP14.91□□□□□ -0.02
HLCS-201ENST00000336648 ANAPC4Q9UJX5 808 aa14.91□□□□□ -0.02
HLCS-201ENST00000336648 ATP2C2O75185 946 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 UBASH3AP57075 661 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 KRT83P78385 493 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 LDHAL6AQ6ZMR3 332 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 DRC1Q96MC2 740 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 IQCGQ9H095 443 aaKnown RBP14.9□□□□□ -0.02
HLCS-201ENST00000336648 NAIPQ13075 1403 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 PIP4K2BP78356 416 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 CCDC82Q8N4S0 544 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 FAM200AQ8TCP9 573 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 SLC26A6Q9BXS9 759 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 WASLO00401 505 aaPredicted RBP14.9□□□□□ -0.02
HLCS-201ENST00000336648 PSMA7O14818 248 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 WTAPQ15007 396 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 ANKRD36BQ8N2N9 1353 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 A0A1W2PRG0 241 aa14.9□□□□□ -0.02
HLCS-201ENST00000336648 MRPS27Q92552 414 aaKnown RBP14.89□□□□□ -0.03
HLCS-201ENST00000336648 BIN1O00499 593 aa14.89□□□□□ -0.03
HLCS-201ENST00000336648 ESR2Q92731 530 aa14.89□□□□□ -0.03
HLCS-201ENST00000336648 TFIP11Q9UBB9 837 aaKnown RBP14.89□□□□□ -0.03
HLCS-201ENST00000336648 MAP3K2Q9Y2U5 619 aa14.89□□□□□ -0.03
HLCS-201ENST00000336648 WDR97A6NE52 1622 aa14.89□□□□□ -0.03
HLCS-201ENST00000336648 FAM135AQ9P2D6 1515 aa14.89□□□□□ -0.03
HLCS-201ENST00000336648 RSPH14Q9UHP6 348 aa14.89□□□□□ -0.03
HLCS-201ENST00000336648 ZFP91Q96JP5 570 aaPredicted RBP14.89□□□□□ -0.03
HLCS-201ENST00000336648 RRAGBQ5VZM2 374 aa14.89□□□□□ -0.03
HLCS-201ENST00000336648 TMEM87AQ8NBN3 555 aa14.89□□□□□ -0.03
HLCS-201ENST00000336648 RSRC1Q96IZ7 334 aaKnown RBP14.89□□□□□ -0.03
HLCS-201ENST00000336648 SWAP70Q9UH65 585 aa14.89□□□□□ -0.03
HLCS-201ENST00000336648 SCAF11Q99590 1463 aaKnown RBP14.88□□□□□ -0.03
HLCS-201ENST00000336648 F6X3S4 739 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 CALM1P0DP23 149 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 CALM2P0DP24 149 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 CALM3P0DP25 149 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 ZBTB43O43298 467 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 ZSCAN23Q3MJ62 389 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 MICU3Q86XE3 530 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 MICALL1Q8N3F8 863 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 ANKS4BQ8N8V4 417 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 RAB3IL1Q8TBN0 382 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 MIPOL1Q8TD10 442 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 EXOC5O00471 708 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 MYO1BO43795 1136 aa14.88□□□□□ -0.03
HLCS-201ENST00000336648 UTP14AQ9BVJ6 771 aaKnown RBP14.88□□□□□ -0.03
HLCS-201ENST00000336648 SNRPA1P09661 255 aaKnown RBP14.87□□□□□ -0.03
HLCS-201ENST00000336648 STAT6P42226 847 aa14.87□□□□□ -0.03
HLCS-201ENST00000336648 KIAA1524Q8TCG1 905 aa14.87□□□□□ -0.03
HLCS-201ENST00000336648 ALDH1L1O75891 902 aa14.87□□□□□ -0.03
HLCS-201ENST00000336648 CCDC152Q4G0S7 254 aa14.87□□□□□ -0.03
HLCS-201ENST00000336648 RALGAPBQ86X10 1494 aa14.87□□□□□ -0.03
HLCS-201ENST00000336648 ARFGAP2Q8N6H7 521 aa14.87□□□□□ -0.03
HLCS-201ENST00000336648 CCDC184Q52MB2 194 aa14.87□□□□□ -0.03
HLCS-201ENST00000336648 SMC6Q96SB8 1091 aa14.87□□□□□ -0.03
HLCS-201ENST00000336648 CCDC121Q6ZUS5 278 aa14.87□□□□□ -0.03
HLCS-201ENST00000336648 NME9Q86XW9 330 aa14.87□□□□□ -0.03
HLCS-201ENST00000336648 BICDL2A1A5D9 508 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 B4DLN1 442 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 MRPL12P52815 198 aaKnown RBP14.86□□□□□ -0.03
HLCS-201ENST00000336648 HS1BP3Q53T59 392 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 RPUSD2Q8IZ73 545 aaKnown RBP14.86□□□□□ -0.03
HLCS-201ENST00000336648 BICD1Q96G01 975 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms