RNA–Protein interactions for RNA: ENST00000336418.8

AP3S2-201, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S2, Length 5,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-201ENST00000336418 MICU3Q86XE3 530 aa13.16□□□□□ -0.3
AP3S2-201ENST00000336418 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
AP3S2-201ENST00000336418 FRMD3A2A2Y4 597 aa13.15□□□□□ -0.3
AP3S2-201ENST00000336418 ALDH1L2Q3SY69 923 aa13.15□□□□□ -0.3
AP3S2-201ENST00000336418 NEK1Q96PY6 1258 aa13.15□□□□□ -0.3
AP3S2-201ENST00000336418 PCK1P35558 622 aa13.15□□□□□ -0.3
AP3S2-201ENST00000336418 RBM5P52756 815 aaKnown RBP eCLIP13.15□□□□□ -0.3
AP3S2-201ENST00000336418 UBLCP1Q8WVY7 318 aaPredicted RBP13.15□□□□□ -0.3
AP3S2-201ENST00000336418 SEC63Q9UGP8 760 aaKnown RBP13.15□□□□□ -0.3
AP3S2-201ENST00000336418 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
AP3S2-201ENST00000336418 ZBTB16Q05516 673 aa13.15□□□□□ -0.3
AP3S2-201ENST00000336418 FLIIQ13045 1269 aa13.15□□□□□ -0.3
AP3S2-201ENST00000336418 CC2D2AQ9P2K1 1620 aa13.15□□□□□ -0.31
AP3S2-201ENST00000336418 FCHSD2O94868 740 aa13.15□□□□□ -0.31
AP3S2-201ENST00000336418 MYD88Q99836 296 aa13.15□□□□□ -0.31
AP3S2-201ENST00000336418 NAPBQ9H115 298 aa13.15□□□□□ -0.31
AP3S2-201ENST00000336418 RTL1A6NKG5 1358 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 TAF7Q15545 349 aaPredicted RBP13.14□□□□□ -0.31
AP3S2-201ENST00000336418 BANK1Q8NDB2 785 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 CARD6Q9BX69 1037 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 PHAXQ9H814 394 aaKnown RBP13.14□□□□□ -0.31
AP3S2-201ENST00000336418 BCL2L12Q9HB09 334 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 CYLC1P35663 651 aaPredicted RBP13.14□□□□□ -0.31
AP3S2-201ENST00000336418 MAP2K2P36507 400 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 GABPB1Q06547 395 aaPredicted RBP13.14□□□□□ -0.31
AP3S2-201ENST00000336418 NEK11Q8NG66 645 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 MIPOL1Q8TD10 442 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 BRF1Q92994 677 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 SNX21Q969T3 373 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 FAM114A2Q9NRY5 505 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 METTL24Q5JXM2 366 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 PPP1R9BQ96SB3 815 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 SEC62Q99442 399 aaKnown RBP13.14□□□□□ -0.31
AP3S2-201ENST00000336418 NCAPD3P42695 1498 aa13.14□□□□□ -0.31
AP3S2-201ENST00000336418 DESP17661 470 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 MRPS27Q92552 414 aaKnown RBP13.13□□□□□ -0.31
AP3S2-201ENST00000336418 SAMD15Q9P1V8 674 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 IKBKGQ9Y6K9 419 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 CAVIN2O95810 425 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 FYCO1Q9BQS8 1478 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 DTNBO60941 627 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 NDUFAB1O14561 156 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 IARSP41252 1262 aaKnown RBP13.13□□□□□ -0.31
AP3S2-201ENST00000336418 CCDC25Q86WR0 208 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 KIAA1107Q9UPP5 1409 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 CCDC194A0A1B0GVG4 234 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 GOLIM4O00461 696 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 TACC1O75410 805 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 GJC1P36383 396 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 EVI5LQ96CN4 794 aa13.13□□□□□ -0.31
AP3S2-201ENST00000336418 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
AP3S2-201ENST00000336418 VIMP08670 466 aaKnown RBP13.12□□□□□ -0.31
AP3S2-201ENST00000336418 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
AP3S2-201ENST00000336418 ANKRD18BA2A2Z9 1011 aa13.12□□□□□ -0.31
AP3S2-201ENST00000336418 METAP2P50579 478 aaKnown RBP eCLIP13.12□□□□□ -0.31
AP3S2-201ENST00000336418 LACTBP83111 547 aaPredicted RBP13.12□□□□□ -0.31
AP3S2-201ENST00000336418 FAM114A1Q8IWE2 563 aa13.12□□□□□ -0.31
AP3S2-201ENST00000336418 ZSCAN29Q8IWY8 852 aaPredicted RBP13.12□□□□□ -0.31
AP3S2-201ENST00000336418 SMC5Q8IY18 1101 aa13.12□□□□□ -0.31
AP3S2-201ENST00000336418 POLA1P09884 1462 aaPredicted RBP13.12□□□□□ -0.31
AP3S2-201ENST00000336418 PLEKHH2Q8IVE3 1493 aa13.12□□□□□ -0.31
AP3S2-201ENST00000336418 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
AP3S2-201ENST00000336418 RNASE9P60153 205 aaKnown RBP13.12□□□□□ -0.31
AP3S2-201ENST00000336418 ARHGAP5Q13017 1502 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 DDX23Q9BUQ8 820 aaKnown RBP13.11□□□□□ -0.31
AP3S2-201ENST00000336418 LONRF3Q496Y0 759 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 TMEM67Q5HYA8 995 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 ATP11AP98196 1134 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
AP3S2-201ENST00000336418 CFAP58Q5T655 872 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 CCDC63Q8NA47 563 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 SNRKQ9NRH2 765 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 CTCFLQ8NI51 663 aaPredicted RBP13.11□□□□□ -0.31
AP3S2-201ENST00000336418 EXOC1Q9NV70 894 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 FEZ2Q9UHY8 353 aaPredicted RBP13.11□□□□□ -0.31
AP3S2-201ENST00000336418 UBXN1Q04323 297 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 Q6ZUG5 572 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 JARID2Q92833 1246 aaPredicted RBP13.11□□□□□ -0.31
AP3S2-201ENST00000336418 DHX58Q96C10 678 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 CFAP57Q96MR6 1250 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 CTAGE1Q96RT6 745 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 SELENOOQ9BVL4 669 aa13.11□□□□□ -0.31
AP3S2-201ENST00000336418 TMEM266Q2M3C6 531 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 GDAP1L1Q96MZ0 367 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 SMC6Q96SB8 1091 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 IQCGQ9H095 443 aaKnown RBP13.1□□□□□ -0.31
AP3S2-201ENST00000336418 VAT1LQ9HCJ6 419 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 PDE1CQ14123 709 aaPredicted RBP13.1□□□□□ -0.31
AP3S2-201ENST00000336418 GOLGA6CA6NDK9 693 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 GOLGA6DP0CG33 693 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 GRIPAP1Q4V328 841 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 ESYT1Q9BSJ8 1104 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 GOLGA6AQ9NYA3 693 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 CALML4Q96GE6 196 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 TACO1Q9BSH4 297 aaKnown RBP13.1□□□□□ -0.31
AP3S2-201ENST00000336418 RASAL2Q9UJF2 1139 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 GNAT3A8MTJ3 354 aa13.1□□□□□ -0.31
AP3S2-201ENST00000336418 FERP16591 822 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms