RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 RPGRQ92834 1020 aaKnown RBP17.67■□□□□ 0.42
APOBEC3B-202ENST00000335760 CCDC85AQ96PX6 553 aaPredicted RBP17.67■□□□□ 0.42
APOBEC3B-202ENST00000335760 CRBNQ96SW2 442 aa17.67■□□□□ 0.42
APOBEC3B-202ENST00000335760 GNAI2P04899 355 aa17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 NPR1P16066 1061 aa17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 CCDC152Q4G0S7 254 aa17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 TTLL11Q8NHH1 800 aa17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 ZNF622Q969S3 477 aaKnown RBP eCLIP17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 MASTLQ96GX5 879 aa17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 RBM17Q96I25 401 aaKnown RBP17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 BICC1Q9H694 974 aaKnown RBP17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 LRRFIP2Q9Y608 721 aaKnown RBP17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 CSF1RP07333 972 aa17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 STYK1Q6J9G0 422 aa17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 LMBR1LQ6UX01 489 aa17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 CHMP4BQ9H444 224 aaKnown RBP17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 CHMP3Q9Y3E7 222 aa17.66■□□□□ 0.42
APOBEC3B-202ENST00000335760 DLEC1Q9Y238 1755 aa17.65■□□□□ 0.42
APOBEC3B-202ENST00000335760 KCNA3P22001 575 aa17.65■□□□□ 0.42
APOBEC3B-202ENST00000335760 IRX6P78412 446 aaPredicted RBP17.65■□□□□ 0.42
APOBEC3B-202ENST00000335760 DDX46Q7L014 1031 aaKnown RBP17.65■□□□□ 0.42
APOBEC3B-202ENST00000335760 ANKRD44Q8N8A2 993 aa17.65■□□□□ 0.42
APOBEC3B-202ENST00000335760 GREM2Q9H772 168 aa17.65■□□□□ 0.42
APOBEC3B-202ENST00000335760 C1orf115Q9H7X2 142 aa17.65■□□□□ 0.42
APOBEC3B-202ENST00000335760 HOXA10P31260 410 aaPredicted RBP17.64■□□□□ 0.41
APOBEC3B-202ENST00000335760 FAM161AQ3B820 660 aa17.64■□□□□ 0.41
APOBEC3B-202ENST00000335760 ZBTB40Q9NUA8 1239 aa17.64■□□□□ 0.41
APOBEC3B-202ENST00000335760 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
APOBEC3B-202ENST00000335760 CNKSR1Q969H4 720 aa17.63■□□□□ 0.41
APOBEC3B-202ENST00000335760 SEC31BQ9NQW1 1179 aa17.63■□□□□ 0.41
APOBEC3B-202ENST00000335760 PIM2Q9P1W9 311 aa17.63■□□□□ 0.41
APOBEC3B-202ENST00000335760 WWC3Q9ULE0 1092 aa17.63■□□□□ 0.41
APOBEC3B-202ENST00000335760 ALDH1B1P30837 517 aa17.62■□□□□ 0.41
APOBEC3B-202ENST00000335760 CRAMP1Q96RY5 1269 aa17.62■□□□□ 0.41
APOBEC3B-202ENST00000335760 RTL9Q8NET4 1388 aa17.62■□□□□ 0.41
APOBEC3B-202ENST00000335760 TAF1P21675 1872 aa17.61■□□□□ 0.41
APOBEC3B-202ENST00000335760 CACNA1SQ13698 1873 aa17.61■□□□□ 0.41
APOBEC3B-202ENST00000335760 ANKRD18BA2A2Z9 1011 aa17.61■□□□□ 0.41
APOBEC3B-202ENST00000335760 ITGA6P23229 1130 aa17.61■□□□□ 0.41
APOBEC3B-202ENST00000335760 IFIT5Q13325 482 aaKnown RBP17.61■□□□□ 0.41
APOBEC3B-202ENST00000335760 GRAPQ13588 217 aa17.61■□□□□ 0.41
APOBEC3B-202ENST00000335760 CCDC57Q2TAC2 916 aa17.61■□□□□ 0.41
APOBEC3B-202ENST00000335760 TTLL6Q8N841 843 aa17.61■□□□□ 0.41
APOBEC3B-202ENST00000335760 GRAPLQ8TC17 118 aaPredicted RBP17.61■□□□□ 0.41
APOBEC3B-202ENST00000335760 SRCAPQ6ZRS2 3230 aa17.6■□□□□ 0.41
APOBEC3B-202ENST00000335760 EXOC6Q8TAG9 804 aa17.6■□□□□ 0.41
APOBEC3B-202ENST00000335760 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
APOBEC3B-202ENST00000335760 BRCA1P38398 1863 aaKnown RBP17.6■□□□□ 0.41
APOBEC3B-202ENST00000335760 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
APOBEC3B-202ENST00000335760 PRPF40BQ6NWY9 871 aaKnown RBP17.59■□□□□ 0.41
APOBEC3B-202ENST00000335760 CDC5LQ99459 802 aaKnown RBP17.59■□□□□ 0.41
APOBEC3B-202ENST00000335760 COL4A1P02462 1669 aa17.59■□□□□ 0.41
APOBEC3B-202ENST00000335760 SRGAP3O43295 1099 aa17.58■□□□□ 0.4
APOBEC3B-202ENST00000335760 BBOX1O75936 387 aa17.58■□□□□ 0.4
APOBEC3B-202ENST00000335760 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.4
APOBEC3B-202ENST00000335760 ATP8B2P98198 1209 aa17.58■□□□□ 0.4
APOBEC3B-202ENST00000335760 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.4
APOBEC3B-202ENST00000335760 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
APOBEC3B-202ENST00000335760 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.4
APOBEC3B-202ENST00000335760 SLX4Q8IY92 1834 aa17.58■□□□□ 0.4
APOBEC3B-202ENST00000335760 PPEF1O14829 653 aaPredicted RBP17.57■□□□□ 0.4
APOBEC3B-202ENST00000335760 MTX1Q13505 466 aa17.57■□□□□ 0.4
APOBEC3B-202ENST00000335760 CEP85Q6P2H3 762 aa17.57■□□□□ 0.4
APOBEC3B-202ENST00000335760 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
APOBEC3B-202ENST00000335760 ZNF594Q96JF6 807 aaPredicted RBP17.57■□□□□ 0.4
APOBEC3B-202ENST00000335760 BCS1LQ9Y276 419 aa17.57■□□□□ 0.4
APOBEC3B-202ENST00000335760 PNMA6EA0A0J9YXQ4 647 aa17.56■□□□□ 0.4
APOBEC3B-202ENST00000335760 IGHMBP2P38935 993 aaKnown RBP17.56■□□□□ 0.4
APOBEC3B-202ENST00000335760 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
APOBEC3B-202ENST00000335760 RFX5P48382 616 aaPredicted RBP17.55■□□□□ 0.4
APOBEC3B-202ENST00000335760 KLHDC4Q8TBB5 520 aa17.55■□□□□ 0.4
APOBEC3B-202ENST00000335760 MPHOSPH8Q99549 860 aa17.55■□□□□ 0.4
APOBEC3B-202ENST00000335760 C21orf2O43822 256 aa17.54■□□□□ 0.4
APOBEC3B-202ENST00000335760 TMC4Q7Z404 712 aa17.54■□□□□ 0.4
APOBEC3B-202ENST00000335760 RPAP2Q8IXW5 612 aaPredicted RBP17.54■□□□□ 0.4
APOBEC3B-202ENST00000335760 ATP6V0A2Q9Y487 856 aa17.54■□□□□ 0.4
APOBEC3B-202ENST00000335760 NEFLP07196 543 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 PTPN12Q05209 780 aaKnown RBP17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 AAMPQ13685 434 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 SP8Q8IXZ3 490 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 SSH3Q8TE77 659 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 C7orf43Q8WVR3 580 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 BSDC1Q9NW68 430 aaPredicted RBP17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 POLA2Q14181 598 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 GPR162Q16538 588 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 OLFM4Q6UX06 510 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 LDHAL6AQ6ZMR3 332 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 PCDHB15Q9Y5E8 787 aa17.53■□□□□ 0.4
APOBEC3B-202ENST00000335760 ARFGEF1Q9Y6D6 1849 aa17.52■□□□□ 0.4
APOBEC3B-202ENST00000335760 YBX3P16989 372 aaKnown RBP eCLIP17.52■□□□□ 0.392e-7■■■■□ 25.1
APOBEC3B-202ENST00000335760 SIRT2Q8IXJ6 389 aa17.52■□□□□ 0.39
APOBEC3B-202ENST00000335760 PUS3Q9BZE2 481 aaKnown RBP17.52■□□□□ 0.39
APOBEC3B-202ENST00000335760 COPRSQ9NQ92 184 aa17.52■□□□□ 0.39
APOBEC3B-202ENST00000335760 HMMRO75330 724 aa17.51■□□□□ 0.39
APOBEC3B-202ENST00000335760 LRRC24Q50LG9 513 aa17.51■□□□□ 0.39
APOBEC3B-202ENST00000335760 SOGA3Q5TF21 947 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms