RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 TTLL11Q8NHH1 800 aa18.93■□□□□ 0.62
CMC1-201ENST00000334841 SF3B3Q15393 1217 aaKnown RBP18.92■□□□□ 0.62
CMC1-201ENST00000334841 FAM161AQ3B820 660 aa18.92■□□□□ 0.62
CMC1-201ENST00000334841 CRY2Q49AN0 593 aa18.92■□□□□ 0.62
CMC1-201ENST00000334841 SIRT2Q8IXJ6 389 aa18.92■□□□□ 0.62
CMC1-201ENST00000334841 NLRP3Q96P20 1036 aa18.92■□□□□ 0.62
CMC1-201ENST00000334841 CCDC85AQ96PX6 553 aaPredicted RBP18.92■□□□□ 0.62
CMC1-201ENST00000334841 RTL9Q8NET4 1388 aa18.92■□□□□ 0.62
CMC1-201ENST00000334841 DLEC1Q9Y238 1755 aa18.91■□□□□ 0.62
CMC1-201ENST00000334841 PNMA6EA0A0J9YXQ4 647 aa18.91■□□□□ 0.62
CMC1-201ENST00000334841 KLRG2A4D1S0 409 aaPredicted RBP18.91■□□□□ 0.62
CMC1-201ENST00000334841 GREM2Q9H772 168 aa18.91■□□□□ 0.62
CMC1-201ENST00000334841 CCDC152Q4G0S7 254 aa18.9■□□□□ 0.62
CMC1-201ENST00000334841 CHMP3Q9Y3E7 222 aa18.9■□□□□ 0.62
CMC1-201ENST00000334841 SRGAP3O43295 1099 aa18.89■□□□□ 0.61
CMC1-201ENST00000334841 PDE6BP35913 854 aa18.89■□□□□ 0.61
CMC1-201ENST00000334841 ATP8B2P98198 1209 aa18.89■□□□□ 0.61
CMC1-201ENST00000334841 RPAP2Q8IXW5 612 aaPredicted RBP18.89■□□□□ 0.61
CMC1-201ENST00000334841 ITGA6P23229 1130 aa18.88■□□□□ 0.61
CMC1-201ENST00000334841 RFX5P48382 616 aaPredicted RBP18.88■□□□□ 0.61
CMC1-201ENST00000334841 POLA2Q14181 598 aa18.88■□□□□ 0.61
CMC1-201ENST00000334841 SSH3Q8TE77 659 aa18.88■□□□□ 0.61
CMC1-201ENST00000334841 SEC31BQ9NQW1 1179 aa18.88■□□□□ 0.61
CMC1-201ENST00000334841 ERICH6BQ5W0A0 696 aa18.87■□□□□ 0.61
CMC1-201ENST00000334841 SPEF2Q9C093 1822 aa18.87■□□□□ 0.61
CMC1-201ENST00000334841 SRGNP10124 158 aa18.86■□□□□ 0.61
CMC1-201ENST00000334841 CHRNA5P30532 468 aa18.86■□□□□ 0.61
CMC1-201ENST00000334841 IFIT5Q13325 482 aaKnown RBP18.86■□□□□ 0.61
CMC1-201ENST00000334841 C2CD5Q86YS7 1000 aa18.86■□□□□ 0.61
CMC1-201ENST00000334841 RPGRQ92834 1020 aaKnown RBP18.86■□□□□ 0.61
CMC1-201ENST00000334841 TAF1P21675 1872 aa18.86■□□□□ 0.61
CMC1-201ENST00000334841 ANKRD18BA2A2Z9 1011 aa18.85■□□□□ 0.61
CMC1-201ENST00000334841 HOXA10P31260 410 aaPredicted RBP18.85■□□□□ 0.61
CMC1-201ENST00000334841 CCDC57Q2TAC2 916 aa18.85■□□□□ 0.61
CMC1-201ENST00000334841 KLHL34Q8N239 644 aa18.85■□□□□ 0.61
CMC1-201ENST00000334841 KLHDC4Q8TBB5 520 aa18.85■□□□□ 0.61
CMC1-201ENST00000334841 CD2APQ9Y5K6 639 aa18.85■□□□□ 0.61
CMC1-201ENST00000334841 H0YIN7 160 aa18.84■□□□□ 0.61
CMC1-201ENST00000334841 HMMRO75330 724 aa18.84■□□□□ 0.61
CMC1-201ENST00000334841 NPR1P16066 1061 aa18.84■□□□□ 0.61
CMC1-201ENST00000334841 PTPN12Q05209 780 aaKnown RBP18.84■□□□□ 0.61
CMC1-201ENST00000334841 HDAC1Q13547 482 aaPredicted RBP18.84■□□□□ 0.61
CMC1-201ENST00000334841 DDX46Q7L014 1031 aaKnown RBP18.84■□□□□ 0.61
CMC1-201ENST00000334841 CELF1Q92879 486 aaKnown RBP18.84■□□□□ 0.61
CMC1-201ENST00000334841 ZNF594Q96JF6 807 aaPredicted RBP18.84■□□□□ 0.61
CMC1-201ENST00000334841 PPP1R1BQ9UD71 204 aaPredicted RBP18.84■□□□□ 0.61
CMC1-201ENST00000334841 PA2G4Q9UQ80 394 aaKnown RBP18.84■□□□□ 0.61
CMC1-201ENST00000334841 LRRC37AA6NMS7 1700 aa18.83■□□□□ 0.61
CMC1-201ENST00000334841 DPEP1P16444 411 aa18.83■□□□□ 0.6
CMC1-201ENST00000334841 MASTLQ96GX5 879 aa18.83■□□□□ 0.6
CMC1-201ENST00000334841 RBM17Q96I25 401 aaKnown RBP18.83■□□□□ 0.6
CMC1-201ENST00000334841 PDZRN3Q9UPQ7 1066 aa18.83■□□□□ 0.6
CMC1-201ENST00000334841 BRCA1P38398 1863 aaKnown RBP18.82■□□□□ 0.6
CMC1-201ENST00000334841 CACNA1SQ13698 1873 aa18.82■□□□□ 0.6
CMC1-201ENST00000334841 IGHDP01880 384 aa18.82■□□□□ 0.6
CMC1-201ENST00000334841 KCNA3P22001 575 aa18.82■□□□□ 0.6
CMC1-201ENST00000334841 TGFB2P61812 414 aa18.82■□□□□ 0.6
CMC1-201ENST00000334841 GRAPQ13588 217 aa18.82■□□□□ 0.6
CMC1-201ENST00000334841 STYK1Q6J9G0 422 aa18.82■□□□□ 0.6
CMC1-201ENST00000334841 GRAPLQ8TC17 118 aaPredicted RBP18.82■□□□□ 0.6
CMC1-201ENST00000334841 CRAMP1Q96RY5 1269 aa18.82■□□□□ 0.6
CMC1-201ENST00000334841 CDC5LQ99459 802 aaKnown RBP18.82■□□□□ 0.6
CMC1-201ENST00000334841 COPRSQ9NQ92 184 aa18.82■□□□□ 0.6
CMC1-201ENST00000334841 A0A1B0GUL6 1792 aa18.81■□□□□ 0.6
CMC1-201ENST00000334841 A0A0G2JLW4 131 aa18.81■□□□□ 0.6
CMC1-201ENST00000334841 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
CMC1-201ENST00000334841 SLC51AQ86UW1 340 aa18.81■□□□□ 0.6
CMC1-201ENST00000334841 NLGN2Q8NFZ4 835 aa18.81■□□□□ 0.6
CMC1-201ENST00000334841 FHDC1Q9C0D6 1143 aaPredicted RBP18.81■□□□□ 0.6
CMC1-201ENST00000334841 SIL1Q9H173 461 aa18.81■□□□□ 0.6
CMC1-201ENST00000334841 ANKRD18AQ8IVF6 992 aa18.8■□□□□ 0.6
CMC1-201ENST00000334841 ZNF622Q969S3 477 aaKnown RBP eCLIP18.8■□□□□ 0.65e-12■□□□□ 9.1
CMC1-201ENST00000334841 PUS3Q9BZE2 481 aaKnown RBP18.8■□□□□ 0.6
CMC1-201ENST00000334841 PPP4R2Q9NY27 417 aa18.8■□□□□ 0.6
CMC1-201ENST00000334841 GTF3C3Q9Y5Q9 886 aa18.8■□□□□ 0.6
CMC1-201ENST00000334841 IGHMBP2P38935 993 aaKnown RBP18.79■□□□□ 0.6
CMC1-201ENST00000334841 RPS8P62241 208 aaKnown RBP18.79■□□□□ 0.6
CMC1-201ENST00000334841 LRRC24Q50LG9 513 aa18.79■□□□□ 0.6
CMC1-201ENST00000334841 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
CMC1-201ENST00000334841 EXOC6BQ9Y2D4 811 aa18.79■□□□□ 0.6
CMC1-201ENST00000334841 NOP58Q9Y2X3 529 aaKnown RBP18.79■□□□□ 0.6
CMC1-201ENST00000334841 SURF6O75683 361 aaKnown RBP18.78■□□□□ 0.6
CMC1-201ENST00000334841 PRPF40BQ6NWY9 871 aaKnown RBP18.78■□□□□ 0.6
CMC1-201ENST00000334841 ATG9AQ7Z3C6 839 aa18.78■□□□□ 0.6
CMC1-201ENST00000334841 KDM2BQ8NHM5 1336 aa18.77■□□□□ 0.6
CMC1-201ENST00000334841 SLX4Q8IY92 1834 aa18.77■□□□□ 0.6
CMC1-201ENST00000334841 EYA2O00167 538 aa18.77■□□□□ 0.6
CMC1-201ENST00000334841 PPEF1O14829 653 aaPredicted RBP18.77■□□□□ 0.6
CMC1-201ENST00000334841 CIAO1O76071 339 aa18.77■□□□□ 0.6
CMC1-201ENST00000334841 ALDH1B1P30837 517 aa18.77■□□□□ 0.6
CMC1-201ENST00000334841 B4GALNT3Q6L9W6 998 aa18.77■□□□□ 0.6
CMC1-201ENST00000334841 LDHAL6AQ6ZMR3 332 aa18.77■□□□□ 0.6
CMC1-201ENST00000334841 CNKSR1Q969H4 720 aa18.77■□□□□ 0.6
CMC1-201ENST00000334841 CCDC136Q96JN2 1154 aa18.77■□□□□ 0.6
CMC1-201ENST00000334841 DCTPP1Q9H773 170 aa18.77■□□□□ 0.6
CMC1-201ENST00000334841 BSDC1Q9NW68 430 aaPredicted RBP18.77■□□□□ 0.6
CMC1-201ENST00000334841 LTBP1Q14766 1721 aa18.77■□□□□ 0.59
CMC1-201ENST00000334841 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
CMC1-201ENST00000334841 CNNM1Q9NRU3 951 aa18.76■□□□□ 0.59
CMC1-201ENST00000334841 FBXO3Q9UK99 471 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms