RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 KAZALD1Q96I82 304 aa24.35■■□□□ 1.49
SPNS1-203ENST00000334536 SNRKQ9NRH2 765 aa24.35■■□□□ 1.49
SPNS1-203ENST00000334536 ABCC6O95255 1503 aa24.35■■□□□ 1.49
SPNS1-203ENST00000334536 C1orf167Q5SNV9 1468 aa24.34■■□□□ 1.49
SPNS1-203ENST00000334536 KCNF1Q9H3M0 494 aa24.34■■□□□ 1.49
SPNS1-203ENST00000334536 ZSWIM6Q9HCJ5 1215 aa24.34■■□□□ 1.49
SPNS1-203ENST00000334536 SH2B1Q9NRF2 756 aaPredicted RBP24.34■■□□□ 1.49
SPNS1-203ENST00000334536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.34■■□□□ 1.49
SPNS1-203ENST00000334536 STRCP1A6NGW2 1772 aa24.34■■□□□ 1.49
SPNS1-203ENST00000334536 ZNF790Q6PG37 636 aa24.34■■□□□ 1.49
SPNS1-203ENST00000334536 USP48Q86UV5 1035 aa24.34■■□□□ 1.49
SPNS1-203ENST00000334536 RAPGEF4Q8WZA2 1011 aa24.34■■□□□ 1.49
SPNS1-203ENST00000334536 BICC1Q9H694 974 aaKnown RBP24.34■■□□□ 1.49
SPNS1-203ENST00000334536 PYCARDQ9ULZ3 195 aa24.34■■□□□ 1.49
SPNS1-203ENST00000334536 SMC3Q9UQE7 1217 aa24.34■■□□□ 1.49
SPNS1-203ENST00000334536 SASH1O94885 1247 aa24.33■■□□□ 1.49
SPNS1-203ENST00000334536 CASTP20810 708 aaKnown RBP24.33■■□□□ 1.49
SPNS1-203ENST00000334536 PTH1RQ03431 593 aa24.33■■□□□ 1.49
SPNS1-203ENST00000334536 SLC52A2Q9HAB3 445 aa24.33■■□□□ 1.49
SPNS1-203ENST00000334536 ATP6V1DQ9Y5K8 247 aa24.33■■□□□ 1.49
SPNS1-203ENST00000334536 NEXNQ0ZGT2 675 aa24.32■■□□□ 1.48
SPNS1-203ENST00000334536 RIC3Q7Z5B4 369 aa24.32■■□□□ 1.48
SPNS1-203ENST00000334536 PDRG1Q9NUG6 133 aa24.32■■□□□ 1.48
SPNS1-203ENST00000334536 CYP46A1Q9Y6A2 500 aa24.32■■□□□ 1.48
SPNS1-203ENST00000334536 CCDC171Q6TFL3 1326 aa24.32■■□□□ 1.48
SPNS1-203ENST00000334536 STRCQ7RTU9 1775 aa24.32■■□□□ 1.48
SPNS1-203ENST00000334536 STX6O43752 255 aa24.32■■□□□ 1.48
SPNS1-203ENST00000334536 NECTIN1Q15223 517 aa24.32■■□□□ 1.48
SPNS1-203ENST00000334536 AXDND1Q5T1B0 1012 aaPredicted RBP24.32■■□□□ 1.48
SPNS1-203ENST00000334536 RNF20Q5VTR2 975 aa24.32■■□□□ 1.48
SPNS1-203ENST00000334536 ZKSCAN1P17029 563 aaPredicted RBP24.31■■□□□ 1.48
SPNS1-203ENST00000334536 CCDC112Q8NEF3 446 aa24.31■■□□□ 1.48
SPNS1-203ENST00000334536 NPHP3Q7Z494 1330 aa24.31■■□□□ 1.48
SPNS1-203ENST00000334536 ALS2Q96Q42 1657 aa24.3■■□□□ 1.48
SPNS1-203ENST00000334536 IGKV5-2P06315 115 aa24.3■■□□□ 1.48
SPNS1-203ENST00000334536 TATP17735 454 aaPredicted RBP24.3■■□□□ 1.48
SPNS1-203ENST00000334536 MUM1L1Q5H9M0 696 aa24.3■■□□□ 1.48
SPNS1-203ENST00000334536 PRPF40BQ6NWY9 871 aaKnown RBP24.3■■□□□ 1.48
SPNS1-203ENST00000334536 EAF2Q96CJ1 260 aaPredicted RBP24.3■■□□□ 1.48
SPNS1-203ENST00000334536 JAKMIP1Q96N16 626 aaKnown RBP24.3■■□□□ 1.48
SPNS1-203ENST00000334536 C19orf44Q9H6X5 657 aa24.3■■□□□ 1.48
SPNS1-203ENST00000334536 SCN11AQ9UI33 1791 aa24.3■■□□□ 1.48
SPNS1-203ENST00000334536 SYT1P21579 422 aa24.3■■□□□ 1.48
SPNS1-203ENST00000334536 AIMP1Q12904 312 aaKnown RBP24.3■■□□□ 1.48
SPNS1-203ENST00000334536 RNF216Q9NWF9 866 aaPredicted RBP24.3■■□□□ 1.48
SPNS1-203ENST00000334536 MRC1P22897 1456 aa24.3■■□□□ 1.48
SPNS1-203ENST00000334536 METTL22Q9BUU2 404 aaPredicted RBP24.29■■□□□ 1.48
SPNS1-203ENST00000334536 KDM6AO15550 1401 aaPredicted RBP24.29■■□□□ 1.48
SPNS1-203ENST00000334536 NEURL1BA8MQ27 555 aa24.28■■□□□ 1.48
SPNS1-203ENST00000334536 CLGNO14967 610 aa24.28■■□□□ 1.48
SPNS1-203ENST00000334536 PHKG2P15735 406 aa24.28■■□□□ 1.48
SPNS1-203ENST00000334536 MAP4K1Q92918 833 aa24.28■■□□□ 1.48
SPNS1-203ENST00000334536 GADD45BO75293 160 aaPredicted RBP24.28■■□□□ 1.48
SPNS1-203ENST00000334536 F13A1P00488 732 aa24.28■■□□□ 1.48
SPNS1-203ENST00000334536 RGPD5Q99666 1765 aa24.28■■□□□ 1.48
SPNS1-203ENST00000334536 PSMA5P28066 241 aa24.27■■□□□ 1.48
SPNS1-203ENST00000334536 GCKRQ14397 625 aa24.27■■□□□ 1.48
SPNS1-203ENST00000334536 RBM8AQ9Y5S9 174 aaKnown RBP24.27■■□□□ 1.48
SPNS1-203ENST00000334536 CREB3L3Q68CJ9 461 aa24.27■■□□□ 1.48
SPNS1-203ENST00000334536 COL15A1P39059 1388 aa24.26■■□□□ 1.47
SPNS1-203ENST00000334536 RAD51AP2Q09MP3 1159 aa24.26■■□□□ 1.47
SPNS1-203ENST00000334536 NMIQ13287 307 aaPredicted RBP24.26■■□□□ 1.47
SPNS1-203ENST00000334536 IFNL2Q8IZJ0 200 aa24.26■■□□□ 1.47
SPNS1-203ENST00000334536 XAGE3Q8WTP9 111 aa24.26■■□□□ 1.47
SPNS1-203ENST00000334536 ZC3H6P61129 1189 aaKnown RBP24.25■■□□□ 1.47
SPNS1-203ENST00000334536 UBE2HP62256 183 aa24.25■■□□□ 1.47
SPNS1-203ENST00000334536 ADCK5Q3MIX3 580 aa24.25■■□□□ 1.47
SPNS1-203ENST00000334536 CCDC8Q9H0W5 538 aaPredicted RBP24.25■■□□□ 1.47
SPNS1-203ENST00000334536 ALDH8A1Q9H2A2 487 aaPredicted RBP24.25■■□□□ 1.47
SPNS1-203ENST00000334536 NLRP2Q9NX02 1062 aa24.25■■□□□ 1.47
SPNS1-203ENST00000334536 C5P01031 1676 aa24.25■■□□□ 1.47
SPNS1-203ENST00000334536 ERICH4A6NGS2 130 aa24.25■■□□□ 1.47
SPNS1-203ENST00000334536 TNNT3P45378 269 aaPredicted RBP24.25■■□□□ 1.47
SPNS1-203ENST00000334536 NOL10Q9BSC4 688 aaKnown RBP24.25■■□□□ 1.47
SPNS1-203ENST00000334536 GDPD2Q9HCC8 539 aa24.25■■□□□ 1.47
SPNS1-203ENST00000334536 TMEM94Q12767 1356 aa24.24■■□□□ 1.47
SPNS1-203ENST00000334536 SLC39A6Q13433 755 aa24.24■■□□□ 1.47
SPNS1-203ENST00000334536 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
SPNS1-203ENST00000334536 RASSF4Q9H2L5 321 aa24.24■■□□□ 1.47
SPNS1-203ENST00000334536 COPRSQ9NQ92 184 aa24.24■■□□□ 1.47
SPNS1-203ENST00000334536 LARGE1O95461 756 aa24.23■■□□□ 1.47
SPNS1-203ENST00000334536 SNRPA1P09661 255 aaKnown RBP24.23■■□□□ 1.47
SPNS1-203ENST00000334536 HCLS1P14317 486 aaPredicted RBP24.23■■□□□ 1.47
SPNS1-203ENST00000334536 CPA1P15085 419 aa24.23■■□□□ 1.47
SPNS1-203ENST00000334536 GJB2P29033 226 aa24.23■■□□□ 1.47
SPNS1-203ENST00000334536 HNRNPH2P55795 449 aaKnown RBP24.23■■□□□ 1.47
SPNS1-203ENST00000334536 COPS6Q7L5N1 327 aa24.23■■□□□ 1.47
SPNS1-203ENST00000334536 CCDC83Q8IWF9 413 aa24.23■■□□□ 1.47
SPNS1-203ENST00000334536 CNPY2Q9Y2B0 182 aa24.23■■□□□ 1.47
SPNS1-203ENST00000334536 NFATC2IPQ8NCF5 419 aa24.23■■□□□ 1.47
SPNS1-203ENST00000334536 FAM227BQ96M60 508 aa24.23■■□□□ 1.47
SPNS1-203ENST00000334536 FUCA2Q9BTY2 467 aa24.23■■□□□ 1.47
SPNS1-203ENST00000334536 BRMS1Q9HCU9 246 aa24.23■■□□□ 1.47
SPNS1-203ENST00000334536 SLC27A2O14975 620 aa24.22■■□□□ 1.47
SPNS1-203ENST00000334536 BMS1Q14692 1282 aaKnown RBP24.22■■□□□ 1.47
SPNS1-203ENST00000334536 ANKRD1Q15327 319 aa24.22■■□□□ 1.47
SPNS1-203ENST00000334536 FOXD4L6Q3SYB3 417 aaPredicted RBP24.22■■□□□ 1.47
SPNS1-203ENST00000334536 KMT5BQ4FZB7 885 aa24.22■■□□□ 1.47
SPNS1-203ENST00000334536 FOXD4L3Q6VB84 417 aaPredicted RBP24.22■■□□□ 1.47
SPNS1-203ENST00000334536 TXLNBQ8N3L3 684 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms