RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 DBNLQ9UJU6 430 aaKnown RBP12.84□□□□□ -0.35
CCDC172-201ENST00000333254 MTMR6Q9Y217 621 aa12.84□□□□□ -0.35
CCDC172-201ENST00000333254 MYH7P12883 1935 aa12.84□□□□□ -0.35
CCDC172-201ENST00000333254 SOS2Q07890 1332 aaPredicted RBP12.84□□□□□ -0.35
CCDC172-201ENST00000333254 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
CCDC172-201ENST00000333254 ANKRD36CQ5JPF3 1778 aa12.84□□□□□ -0.35
CCDC172-201ENST00000333254 RPS6KB1P23443 525 aa12.83□□□□□ -0.35
CCDC172-201ENST00000333254 GJB2P29033 226 aa12.83□□□□□ -0.35
CCDC172-201ENST00000333254 BLOC1S2Q6QNY1 142 aa12.83□□□□□ -0.35
CCDC172-201ENST00000333254 HAUS7Q99871 368 aa12.83□□□□□ -0.35
CCDC172-201ENST00000333254 FBXO3Q9UK99 471 aa12.83□□□□□ -0.35
CCDC172-201ENST00000333254 LRP6O75581 1613 aa12.83□□□□□ -0.36
CCDC172-201ENST00000333254 STRCQ7RTU9 1775 aa12.83□□□□□ -0.36
CCDC172-201ENST00000333254 TAF5LO75529 589 aa12.83□□□□□ -0.36
CCDC172-201ENST00000333254 LARGE1O95461 756 aa12.83□□□□□ -0.36
CCDC172-201ENST00000333254 KCNJ4P48050 445 aa12.83□□□□□ -0.36
CCDC172-201ENST00000333254 ST3GAL1Q11201 340 aa12.83□□□□□ -0.36
CCDC172-201ENST00000333254 ME3Q16798 604 aa12.83□□□□□ -0.36
CCDC172-201ENST00000333254 FOXD4L5Q5VV16 416 aaPredicted RBP12.83□□□□□ -0.36
CCDC172-201ENST00000333254 UBE3BQ7Z3V4 1068 aa12.83□□□□□ -0.36
CCDC172-201ENST00000333254 FOXD4L4Q8WXT5 416 aaPredicted RBP12.83□□□□□ -0.36
CCDC172-201ENST00000333254 BOLA2Q9H3K6 86 aa12.83□□□□□ -0.36
CCDC172-201ENST00000333254 NOL7Q9UMY1 257 aaKnown RBP12.83□□□□□ -0.36
CCDC172-201ENST00000333254 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
CCDC172-201ENST00000333254 ELP1O95163 1332 aa12.83□□□□□ -0.36
CCDC172-201ENST00000333254 PLCH1Q4KWH8 1693 aa12.82□□□□□ -0.36
CCDC172-201ENST00000333254 A0A087WZG4 1122 aa12.82□□□□□ -0.36
CCDC172-201ENST00000333254 CCDC83Q8IWF9 413 aa12.82□□□□□ -0.36
CCDC172-201ENST00000333254 CCDC191Q8NCU4 936 aa12.82□□□□□ -0.36
CCDC172-201ENST00000333254 ZCRB1Q8TBF4 217 aaKnown RBP12.82□□□□□ -0.36
CCDC172-201ENST00000333254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC172-201ENST00000333254 CHAMP1Q96JM3 812 aa12.82□□□□□ -0.36
CCDC172-201ENST00000333254 SIL1Q9H173 461 aa12.82□□□□□ -0.36
CCDC172-201ENST00000333254 ZNF609O15014 1411 aa12.82□□□□□ -0.36
CCDC172-201ENST00000333254 DDX60Q8IY21 1712 aaKnown RBP12.82□□□□□ -0.36
CCDC172-201ENST00000333254 MYH3P11055 1940 aa12.82□□□□□ -0.36
CCDC172-201ENST00000333254 DCAF8L1A6NGE4 600 aa12.81□□□□□ -0.36
CCDC172-201ENST00000333254 ZNF500O60304 480 aaPredicted RBP12.81□□□□□ -0.36
CCDC172-201ENST00000333254 GADD45BO75293 160 aaPredicted RBP12.81□□□□□ -0.36
CCDC172-201ENST00000333254 CIAO1O76071 339 aa12.81□□□□□ -0.36
CCDC172-201ENST00000333254 ITGB4P16144 1822 aa12.81□□□□□ -0.36
CCDC172-201ENST00000333254 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
CCDC172-201ENST00000333254 TERF1P54274 439 aa12.81□□□□□ -0.36
CCDC172-201ENST00000333254 FOXO4P98177 505 aa12.81□□□□□ -0.36
CCDC172-201ENST00000333254 TFCP2Q12800 502 aa12.81□□□□□ -0.36
CCDC172-201ENST00000333254 KBTBD3Q8NAB2 608 aa12.81□□□□□ -0.36
CCDC172-201ENST00000333254 CARD10Q9BWT7 1032 aa12.81□□□□□ -0.36
CCDC172-201ENST00000333254 ABCC12Q96J65 1359 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 NBPF26B4DH59 902 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 MSNP26038 577 aaKnown RBP12.8□□□□□ -0.36
CCDC172-201ENST00000333254 IL15P40933 162 aaPredicted RBP12.8□□□□□ -0.36
CCDC172-201ENST00000333254 CACNB1Q02641 598 aaPredicted RBP12.8□□□□□ -0.36
CCDC172-201ENST00000333254 CHRNA2Q15822 529 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 NBPF14Q5TI25 921 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 NBPF10Q6P3W6 841 aaKnown RBP12.8□□□□□ -0.36
CCDC172-201ENST00000333254 BRINP3Q76B58 766 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 CWC25Q9NXE8 425 aaPredicted RBP12.8□□□□□ -0.36
CCDC172-201ENST00000333254 CCDC39Q9UFE4 941 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 TPCN1Q9ULQ1 816 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 CNPY2Q9Y2B0 182 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 CPA1P15085 419 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 KLHDC4Q8TBB5 520 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 CABLES1Q8TDN4 633 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 DDX17Q92841 729 aaKnown RBP12.8□□□□□ -0.36
CCDC172-201ENST00000333254 HELLSQ9NRZ9 838 aa12.8□□□□□ -0.36
CCDC172-201ENST00000333254 WNK3Q9BYP7 1800 aa12.79□□□□□ -0.36
CCDC172-201ENST00000333254 HMGB1P09429 215 aaKnown RBP12.79□□□□□ -0.36
CCDC172-201ENST00000333254 TRIM28Q13263 835 aaKnown RBP12.79□□□□□ -0.36
CCDC172-201ENST00000333254 TOB2Q14106 344 aaPredicted RBP12.79□□□□□ -0.36
CCDC172-201ENST00000333254 MCMDC2Q4G0Z9 681 aa12.79□□□□□ -0.36
CCDC172-201ENST00000333254 ATG9AQ7Z3C6 839 aa12.79□□□□□ -0.36
CCDC172-201ENST00000333254 ZNF589Q86UQ0 364 aaPredicted RBP12.79□□□□□ -0.36
CCDC172-201ENST00000333254 ZKSCAN5Q9Y2L8 839 aa12.79□□□□□ -0.36
CCDC172-201ENST00000333254 IL2RBP14784 551 aa12.78□□□□□ -0.36
CCDC172-201ENST00000333254 LMBR1LQ6UX01 489 aa12.78□□□□□ -0.36
CCDC172-201ENST00000333254 CHMP4CQ96CF2 233 aa12.78□□□□□ -0.36
CCDC172-201ENST00000333254 DSCC1Q9BVC3 393 aa12.78□□□□□ -0.36
CCDC172-201ENST00000333254 PRDM11Q9NQV5 511 aa12.78□□□□□ -0.36
CCDC172-201ENST00000333254 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.78□□□□□ -0.36
CCDC172-201ENST00000333254 OFD1O75665 1012 aa12.77□□□□□ -0.36
CCDC172-201ENST00000333254 KRT85P78386 507 aa12.77□□□□□ -0.36
CCDC172-201ENST00000333254 LARP1BQ659C4 914 aaKnown RBP12.77□□□□□ -0.36
CCDC172-201ENST00000333254 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.77□□□□□ -0.36
CCDC172-201ENST00000333254 VSIG10Q8N0Z9 540 aa12.77□□□□□ -0.36
CCDC172-201ENST00000333254 NEK1Q96PY6 1258 aa12.77□□□□□ -0.36
CCDC172-201ENST00000333254 DBNDD2Q9BQY9 259 aa12.77□□□□□ -0.36
CCDC172-201ENST00000333254 LLPHQ9BRT6 129 aaKnown RBP12.77□□□□□ -0.36
CCDC172-201ENST00000333254 FUCA2Q9BTY2 467 aa12.77□□□□□ -0.36
CCDC172-201ENST00000333254 ISCA1Q9BUE6 129 aa12.77□□□□□ -0.36
CCDC172-201ENST00000333254 PLA2G12BQ9BX93 195 aa12.77□□□□□ -0.36
CCDC172-201ENST00000333254 TEX13AQ9BXU3 409 aaPredicted RBP12.77□□□□□ -0.36
CCDC172-201ENST00000333254 GDPD2Q9HCC8 539 aa12.77□□□□□ -0.36
CCDC172-201ENST00000333254 ANO8Q9HCE9 1232 aaPredicted RBP12.77□□□□□ -0.36
CCDC172-201ENST00000333254 ARAP2Q8WZ64 1704 aa12.77□□□□□ -0.37
CCDC172-201ENST00000333254 ATP5J2-PTCD1G3V325 749 aa12.77□□□□□ -0.37
CCDC172-201ENST00000333254 EYA2O00167 538 aa12.77□□□□□ -0.37
CCDC172-201ENST00000333254 PTCD1O75127 700 aaKnown RBP12.77□□□□□ -0.37
CCDC172-201ENST00000333254 FBXL16Q8N461 479 aa12.77□□□□□ -0.37
CCDC172-201ENST00000333254 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms