RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 LRP5O75197 1615 aa14.97□□□□□ -0.01
TRIM49B-201ENST00000332682 TNRC6CQ9HCJ0 1690 aaKnown RBP14.97□□□□□ -0.01
TRIM49B-201ENST00000332682 RAB11FIP3O75154 756 aa14.97□□□□□ -0.01
TRIM49B-201ENST00000332682 HSP90B1P14625 803 aaKnown RBP14.97□□□□□ -0.01
TRIM49B-201ENST00000332682 TM4SF1P30408 202 aa14.97□□□□□ -0.01
TRIM49B-201ENST00000332682 HSP90AB4PQ58FF6 505 aa14.97□□□□□ -0.01
TRIM49B-201ENST00000332682 TPTE2Q6XPS3 522 aa14.97□□□□□ -0.01
TRIM49B-201ENST00000332682 CCDC85AQ96PX6 553 aaPredicted RBP14.97□□□□□ -0.01
TRIM49B-201ENST00000332682 LRRCC1Q9C099 1032 aa14.97□□□□□ -0.01
TRIM49B-201ENST00000332682 SMARCA5O60264 1052 aaPredicted RBP14.96□□□□□ -0.02
TRIM49B-201ENST00000332682 DDR1Q08345 913 aa14.96□□□□□ -0.02
TRIM49B-201ENST00000332682 SLC10A5Q5PT55 438 aa14.96□□□□□ -0.02
TRIM49B-201ENST00000332682 GREM2Q9H772 168 aa14.96□□□□□ -0.02
TRIM49B-201ENST00000332682 GTF2E1P29083 439 aaPredicted RBP14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 IFIT5Q13325 482 aaKnown RBP14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 CCDC57Q2TAC2 916 aa14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 NLGN1Q8N2Q7 840 aa14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 CNBD1Q8NA66 436 aa14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 RHPN1Q8TCX5 695 aa14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 UPF1Q92900 1129 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 KIF1BPQ96EK5 621 aa14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 SIL1Q9H173 461 aa14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 NRXN2Q9P2S2 1712 aa14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 RTL9Q8NET4 1388 aa14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 RIC1Q4ADV7 1423 aa14.95□□□□□ -0.02
TRIM49B-201ENST00000332682 POLRMTO00411 1230 aaKnown RBP14.94□□□□□ -0.02
TRIM49B-201ENST00000332682 ITGA6P23229 1130 aa14.94□□□□□ -0.02
TRIM49B-201ENST00000332682 OS9Q13438 667 aaPredicted RBP14.94□□□□□ -0.02
TRIM49B-201ENST00000332682 C3orf67Q6ZVT6 689 aa14.94□□□□□ -0.02
TRIM49B-201ENST00000332682 ERC1Q8IUD2 1116 aa14.94□□□□□ -0.02
TRIM49B-201ENST00000332682 PELP1Q8IZL8 1130 aaKnown RBP14.94□□□□□ -0.02
TRIM49B-201ENST00000332682 ZBTB47Q9UFB7 747 aaPredicted RBP14.94□□□□□ -0.02
TRIM49B-201ENST00000332682 SASH1O94885 1247 aa14.93□□□□□ -0.02
TRIM49B-201ENST00000332682 SERPINB2P05120 415 aa14.93□□□□□ -0.02
TRIM49B-201ENST00000332682 G3BP1Q13283 466 aaKnown RBP eCLIP14.93□□□□□ -0.02
TRIM49B-201ENST00000332682 PRR5LQ6MZQ0 368 aa14.93□□□□□ -0.02
TRIM49B-201ENST00000332682 ZNF594Q96JF6 807 aaPredicted RBP14.93□□□□□ -0.02
TRIM49B-201ENST00000332682 ANKRD18BA2A2Z9 1011 aa14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 SF3B3Q15393 1217 aaKnown RBP14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 CCDC152Q4G0S7 254 aa14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 CCDC24Q8N4L8 307 aa14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 OTUD7AQ8TE49 926 aaPredicted RBP14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 IL1RAPL2Q9NP60 686 aa14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 COL4A1P02462 1669 aa14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 NPHP1O15259 732 aa14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 CIAO1O76071 339 aa14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 MSL1Q68DK7 614 aa14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 ATG9AQ7Z3C6 839 aa14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 C16orf71Q8IYS4 520 aaPredicted RBP14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.92□□□□□ -0.02
TRIM49B-201ENST00000332682 SPEF2Q9C093 1822 aa14.91□□□□□ -0.02
TRIM49B-201ENST00000332682 SALL3Q9BXA9 1300 aa14.91□□□□□ -0.02
TRIM49B-201ENST00000332682 EYA2O00167 538 aa14.91□□□□□ -0.02
TRIM49B-201ENST00000332682 MMP10P09238 476 aa14.91□□□□□ -0.02
TRIM49B-201ENST00000332682 TAF7LQ5H9L4 462 aa14.91□□□□□ -0.02
TRIM49B-201ENST00000332682 PDGFDQ9GZP0 370 aaPredicted RBP14.91□□□□□ -0.02
TRIM49B-201ENST00000332682 BCL11AQ9H165 835 aa14.91□□□□□ -0.02
TRIM49B-201ENST00000332682 FBXO3Q9UK99 471 aa14.91□□□□□ -0.02
TRIM49B-201ENST00000332682 TAF1P21675 1872 aa14.9□□□□□ -0.02
TRIM49B-201ENST00000332682 ANKRD31Q8N7Z5 1873 aa14.9□□□□□ -0.02
TRIM49B-201ENST00000332682 IL15P40933 162 aaPredicted RBP14.9□□□□□ -0.02
TRIM49B-201ENST00000332682 LRRC24Q50LG9 513 aa14.9□□□□□ -0.02
TRIM49B-201ENST00000332682 PLEKHM2Q8IWE5 1019 aa14.9□□□□□ -0.02
TRIM49B-201ENST00000332682 NLRP3Q96P20 1036 aa14.9□□□□□ -0.02
TRIM49B-201ENST00000332682 PUS3Q9BZE2 481 aaKnown RBP14.9□□□□□ -0.02
TRIM49B-201ENST00000332682 SEC31BQ9NQW1 1179 aa14.9□□□□□ -0.02
TRIM49B-201ENST00000332682 ST5P78524 1137 aa14.89□□□□□ -0.03
TRIM49B-201ENST00000332682 CLASRPQ8N2M8 674 aaKnown RBP14.89□□□□□ -0.03
TRIM49B-201ENST00000332682 TFCP2Q12800 502 aa14.88□□□□□ -0.03
TRIM49B-201ENST00000332682 MX1P20591 662 aa14.87□□□□□ -0.03
TRIM49B-201ENST00000332682 LDHAL6AQ6ZMR3 332 aa14.87□□□□□ -0.03
TRIM49B-201ENST00000332682 EAF2Q96CJ1 260 aaPredicted RBP14.87□□□□□ -0.03
TRIM49B-201ENST00000332682 RIPOR2Q9Y4F9 1068 aa14.87□□□□□ -0.03
TRIM49B-201ENST00000332682 PARP3Q9Y6F1 533 aa14.87□□□□□ -0.03
TRIM49B-201ENST00000332682 ZNF609O15014 1411 aa14.87□□□□□ -0.03
TRIM49B-201ENST00000332682 A0A1B0GUL6 1792 aa14.87□□□□□ -0.03
TRIM49B-201ENST00000332682 CRY2Q49AN0 593 aa14.87□□□□□ -0.03
TRIM49B-201ENST00000332682 AACSQ86V21 672 aa14.87□□□□□ -0.03
TRIM49B-201ENST00000332682 CDC5LQ99459 802 aaKnown RBP14.87□□□□□ -0.03
TRIM49B-201ENST00000332682 OSBPL3Q9H4L5 887 aa14.87□□□□□ -0.03
TRIM49B-201ENST00000332682 IGHMBP2P38935 993 aaKnown RBP14.86□□□□□ -0.03
TRIM49B-201ENST00000332682 PDE1AP54750 535 aa14.86□□□□□ -0.03
TRIM49B-201ENST00000332682 TNNI3KQ59H18 835 aa14.86□□□□□ -0.03
TRIM49B-201ENST00000332682 SLC16A10Q8TF71 515 aa14.86□□□□□ -0.03
TRIM49B-201ENST00000332682 CNNM1Q9NRU3 951 aa14.86□□□□□ -0.03
TRIM49B-201ENST00000332682 STAP2Q9UGK3 403 aa14.86□□□□□ -0.03
TRIM49B-201ENST00000332682 FPGT-TNNI3KV9GXZ4 949 aa14.86□□□□□ -0.03
TRIM49B-201ENST00000332682 COL11A2P13942 1736 aaPredicted RBP14.85□□□□□ -0.03
TRIM49B-201ENST00000332682 KLRG2A4D1S0 409 aaPredicted RBP14.85□□□□□ -0.03
TRIM49B-201ENST00000332682 TSHZ3Q63HK5 1081 aa14.85□□□□□ -0.03
TRIM49B-201ENST00000332682 VGLL2Q8N8G2 317 aa14.85□□□□□ -0.03
TRIM49B-201ENST00000332682 CELF1Q92879 486 aaKnown RBP14.85□□□□□ -0.03
TRIM49B-201ENST00000332682 MPHOSPH8Q99549 860 aa14.85□□□□□ -0.03
TRIM49B-201ENST00000332682 GPR108Q9NPR9 543 aa14.85□□□□□ -0.03
TRIM49B-201ENST00000332682 CEP126Q9P2H0 1117 aa14.85□□□□□ -0.03
TRIM49B-201ENST00000332682 AOX1Q06278 1338 aa14.84□□□□□ -0.03
TRIM49B-201ENST00000332682 IFIT2P09913 472 aaKnown RBP14.84□□□□□ -0.03
TRIM49B-201ENST00000332682 GSPT1P15170 499 aaKnown RBP14.84□□□□□ -0.03
TRIM49B-201ENST00000332682 BMP2KLQ5H9B9 411 aa14.84□□□□□ -0.03
TRIM49B-201ENST00000332682 METTL24Q5JXM2 366 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms