RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 CRAMP1Q96RY5 1269 aa26.48■■□□□ 1.83
YBX1-202ENST00000332220 C9orf78Q9NZ63 289 aaPredicted RBP26.48■■□□□ 1.83
YBX1-202ENST00000332220 ZNF219Q9P2Y4 722 aaPredicted RBP26.48■■□□□ 1.83
YBX1-202ENST00000332220 LRRC37AA6NMS7 1700 aa26.48■■□□□ 1.83
YBX1-202ENST00000332220 HSP90B1P14625 803 aaKnown RBP26.47■■□□□ 1.83
YBX1-202ENST00000332220 ALDH1B1P30837 517 aa26.47■■□□□ 1.83
YBX1-202ENST00000332220 UTYO14607 1347 aa26.46■■□□□ 1.83
YBX1-202ENST00000332220 NBPF7P0C2Y1 421 aaPredicted RBP26.46■■□□□ 1.83
YBX1-202ENST00000332220 CTSWP56202 376 aa26.46■■□□□ 1.83
YBX1-202ENST00000332220 PLA2G12BQ9BX93 195 aa26.46■■□□□ 1.83
YBX1-202ENST00000332220 GRIN3BO60391 1043 aa26.45■■□□□ 1.82
YBX1-202ENST00000332220 INTS3Q68E01 1043 aaKnown RBP26.45■■□□□ 1.82
YBX1-202ENST00000332220 SLC51AQ86UW1 340 aa26.45■■□□□ 1.82
YBX1-202ENST00000332220 CCDC85AQ96PX6 553 aaPredicted RBP26.45■■□□□ 1.82
YBX1-202ENST00000332220 USP44Q9H0E7 712 aa26.45■■□□□ 1.82
YBX1-202ENST00000332220 DICER1Q9UPY3 1922 aaKnown RBP26.45■■□□□ 1.82
YBX1-202ENST00000332220 C21orf2O43822 256 aa26.44■■□□□ 1.82
YBX1-202ENST00000332220 DDX46Q7L014 1031 aaKnown RBP26.44■■□□□ 1.82
YBX1-202ENST00000332220 C7orf43Q8WVR3 580 aa26.44■■□□□ 1.82
YBX1-202ENST00000332220 FOXO4P98177 505 aa26.43■■□□□ 1.82
YBX1-202ENST00000332220 EPHA10Q5JZY3 1008 aa26.43■■□□□ 1.82
YBX1-202ENST00000332220 OLFM4Q6UX06 510 aa26.43■■□□□ 1.82
YBX1-202ENST00000332220 TTLL11Q8NHH1 800 aa26.43■■□□□ 1.82
YBX1-202ENST00000332220 SEC31BQ9NQW1 1179 aa26.43■■□□□ 1.82
YBX1-202ENST00000332220 CCDC152Q4G0S7 254 aa26.42■■□□□ 1.82
YBX1-202ENST00000332220 KAZALD1Q96I82 304 aa26.42■■□□□ 1.82
YBX1-202ENST00000332220 SUCLG2Q96I99 432 aa26.42■■□□□ 1.82
YBX1-202ENST00000332220 A0A1B0GUL6 1792 aa26.41■■□□□ 1.82
YBX1-202ENST00000332220 RLBP1P12271 317 aa26.41■■□□□ 1.82
YBX1-202ENST00000332220 GRAPQ13588 217 aa26.41■■□□□ 1.82
YBX1-202ENST00000332220 TMEM57Q8N5G2 664 aa26.41■■□□□ 1.82
YBX1-202ENST00000332220 GRAPLQ8TC17 118 aaPredicted RBP26.41■■□□□ 1.82
YBX1-202ENST00000332220 CELF1Q92879 486 aaKnown RBP26.41■■□□□ 1.82
YBX1-202ENST00000332220 PPEF1O14829 653 aaPredicted RBP26.4■■□□□ 1.82
YBX1-202ENST00000332220 CSF1RP07333 972 aa26.4■■□□□ 1.82
YBX1-202ENST00000332220 ARHGAP27Q6ZUM4 889 aa26.4■■□□□ 1.82
YBX1-202ENST00000332220 GREM2Q9H772 168 aa26.4■■□□□ 1.82
YBX1-202ENST00000332220 SNED1Q8TER0 1413 aa26.39■■□□□ 1.82
YBX1-202ENST00000332220 RTL9Q8NET4 1388 aa26.39■■□□□ 1.82
YBX1-202ENST00000332220 PLIN1O60240 522 aa26.39■■□□□ 1.82
YBX1-202ENST00000332220 DZIP1LQ8IYY4 767 aaKnown RBP26.39■■□□□ 1.82
YBX1-202ENST00000332220 FTSJ3Q8IY81 847 aaKnown RBP26.38■■□□□ 1.81
YBX1-202ENST00000332220 MEIS3Q99687 375 aa26.38■■□□□ 1.81
YBX1-202ENST00000332220 LTBP1Q14766 1721 aa26.38■■□□□ 1.81
YBX1-202ENST00000332220 BBOX1O75936 387 aa26.37■■□□□ 1.81
YBX1-202ENST00000332220 RASSF7Q02833 373 aa26.37■■□□□ 1.81
YBX1-202ENST00000332220 FAM161AQ3B820 660 aa26.37■■□□□ 1.81
YBX1-202ENST00000332220 NFKBIEO00221 500 aa26.36■■□□□ 1.81
YBX1-202ENST00000332220 CCDC93Q567U6 631 aa26.36■■□□□ 1.81
YBX1-202ENST00000332220 LMBR1LQ6UX01 489 aa26.36■■□□□ 1.81
YBX1-202ENST00000332220 PANK1Q8TE04 598 aa26.36■■□□□ 1.81
YBX1-202ENST00000332220 BICC1Q9H694 974 aaKnown RBP26.36■■□□□ 1.81
YBX1-202ENST00000332220 TIAM2Q8IVF5 1701 aa26.36■■□□□ 1.81
YBX1-202ENST00000332220 ATP6V0A2Q9Y487 856 aa26.35■■□□□ 1.81
YBX1-202ENST00000332220 UBTFL1P0CB47 393 aaPredicted RBP26.34■■□□□ 1.81
YBX1-202ENST00000332220 RPS8P62241 208 aaKnown RBP26.34■■□□□ 1.81
YBX1-202ENST00000332220 SOGA3Q5TF21 947 aa26.34■■□□□ 1.81
YBX1-202ENST00000332220 ANKRD44Q8N8A2 993 aa26.34■■□□□ 1.81
YBX1-202ENST00000332220 ITGA6P23229 1130 aa26.33■■□□□ 1.81
YBX1-202ENST00000332220 CHMP3Q9Y3E7 222 aa26.33■■□□□ 1.81
YBX1-202ENST00000332220 DUOX1Q9NRD9 1551 aa26.33■■□□□ 1.8
YBX1-202ENST00000332220 PRELPP51888 382 aa26.32■■□□□ 1.8
YBX1-202ENST00000332220 RABL6Q3YEC7 729 aaPredicted RBP26.32■■□□□ 1.8
YBX1-202ENST00000332220 SP8Q8IXZ3 490 aa26.32■■□□□ 1.8
YBX1-202ENST00000332220 CDC5LQ99459 802 aaKnown RBP26.32■■□□□ 1.8
YBX1-202ENST00000332220 CC2D2BQ6DHV5 1058 aa26.31■■□□□ 1.8
YBX1-202ENST00000332220 ANKRD18AQ8IVF6 992 aa26.31■■□□□ 1.8
YBX1-202ENST00000332220 ITPRIPQ8IWB1 547 aa26.31■■□□□ 1.8
YBX1-202ENST00000332220 TMC4Q7Z404 712 aa26.3■■□□□ 1.8
YBX1-202ENST00000332220 LRRFIP2Q9Y608 721 aaKnown RBP26.3■■□□□ 1.8
YBX1-202ENST00000332220 LTBP3Q9NS15 1303 aa26.3■■□□□ 1.8
YBX1-202ENST00000332220 GNAI3P08754 354 aa26.29■■□□□ 1.8
YBX1-202ENST00000332220 MS4A1P11836 297 aa26.29■■□□□ 1.8
YBX1-202ENST00000332220 C20orf194Q5TEA3 1177 aa26.29■■□□□ 1.8
YBX1-202ENST00000332220 RTKN2Q8IZC4 609 aa26.29■■□□□ 1.8
YBX1-202ENST00000332220 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.29■■□□□ 1.8
YBX1-202ENST00000332220 TAOK3Q9H2K8 898 aa26.29■■□□□ 1.8
YBX1-202ENST00000332220 ANKRD18BA2A2Z9 1011 aa26.28■■□□□ 1.8
YBX1-202ENST00000332220 IFIT5Q13325 482 aaKnown RBP26.28■■□□□ 1.8
YBX1-202ENST00000332220 FKBP4Q02790 459 aaKnown RBP eCLIP26.27■■□□□ 1.8
YBX1-202ENST00000332220 ZNF594Q96JF6 807 aaPredicted RBP26.27■■□□□ 1.8
YBX1-202ENST00000332220 CCDC57Q2TAC2 916 aa26.26■■□□□ 1.79
YBX1-202ENST00000332220 TMX4Q9H1E5 349 aaPredicted RBP26.26■■□□□ 1.79
YBX1-202ENST00000332220 COG6Q9Y2V7 657 aa26.26■■□□□ 1.79
YBX1-202ENST00000332220 ZBTB7BO15156 539 aaPredicted RBP26.25■■□□□ 1.79
YBX1-202ENST00000332220 IGHMBP2P38935 993 aaKnown RBP26.25■■□□□ 1.79
YBX1-202ENST00000332220 RRP1P56182 461 aaKnown RBP26.25■■□□□ 1.79
YBX1-202ENST00000332220 GPSM2P81274 684 aa26.25■■□□□ 1.79
YBX1-202ENST00000332220 C9orf131Q5VYM1 1079 aa26.25■■□□□ 1.79
YBX1-202ENST00000332220 PSMD1Q99460 953 aa26.25■■□□□ 1.79
YBX1-202ENST00000332220 BSDC1Q9NW68 430 aaPredicted RBP26.25■■□□□ 1.79
YBX1-202ENST00000332220 LMNB1P20700 586 aa26.24■■□□□ 1.79
YBX1-202ENST00000332220 PDE3AQ14432 1141 aa26.24■■□□□ 1.79
YBX1-202ENST00000332220 MVPQ14764 893 aaKnown RBP26.24■■□□□ 1.79
YBX1-202ENST00000332220 GRIPAP1Q4V328 841 aa26.24■■□□□ 1.79
YBX1-202ENST00000332220 MPNDQ8N594 471 aa26.24■■□□□ 1.79
YBX1-202ENST00000332220 ZNF277Q9NRM2 450 aaPredicted RBP26.24■■□□□ 1.79
YBX1-202ENST00000332220 RNF181Q9P0P0 153 aa26.24■■□□□ 1.79
YBX1-202ENST00000332220 HDAC5Q9UQL6 1122 aa26.24■■□□□ 1.79
YBX1-202ENST00000332220 COL4A5P29400 1685 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms