RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 DNAAF4Q8WXU2 420 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 RNF41Q9H4P4 317 aaPredicted RBP12.1□□□□□ -0.47
CLN8-201ENST00000331222 NDC80O14777 642 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 MARCKSP29966 332 aaPredicted RBP12.09□□□□□ -0.47
CLN8-201ENST00000331222 KIF5BP33176 963 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 AMPD3Q01432 767 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 OGFOD1Q8N543 542 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 FERMT1Q9BQL6 677 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 NBPF8Q3BBV2 869 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 LRRC9Q6ZRR7 1453 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 AMOTL2Q9Y2J4 779 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 SSH1Q8WYL5 1049 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 GINS2Q9Y248 185 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 RPGRIP1LQ68CZ1 1315 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 SUPT6HQ7KZ85 1726 aaKnown RBP12.09□□□□□ -0.47
CLN8-201ENST00000331222 ODF2LQ9ULJ1 636 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 GTF2F1P35269 517 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLN8-201ENST00000331222 TTF1Q15361 905 aaPredicted RBP12.09□□□□□ -0.47
CLN8-201ENST00000331222 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
CLN8-201ENST00000331222 BMS1Q14692 1282 aaKnown RBP12.08□□□□□ -0.48
CLN8-201ENST00000331222 CCDC65Q8IXS2 484 aa12.08□□□□□ -0.48
CLN8-201ENST00000331222 HYPKQ9NX55 129 aa12.08□□□□□ -0.48
CLN8-201ENST00000331222 UBAP1LF5GYI3 381 aa12.08□□□□□ -0.48
CLN8-201ENST00000331222 FCHSD2O94868 740 aa12.08□□□□□ -0.48
CLN8-201ENST00000331222 RXRAP19793 462 aa12.08□□□□□ -0.48
CLN8-201ENST00000331222 MIGA1Q8NAN2 632 aa12.08□□□□□ -0.48
CLN8-201ENST00000331222 PHAXQ9H814 394 aaKnown RBP12.08□□□□□ -0.48
CLN8-201ENST00000331222 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
CLN8-201ENST00000331222 CRNKL1Q9BZJ0 848 aaKnown RBP12.08□□□□□ -0.48
CLN8-201ENST00000331222 ORC3Q9UBD5 711 aaPredicted RBP12.08□□□□□ -0.48
CLN8-201ENST00000331222 ZYXQ15942 572 aaKnown RBP12.08□□□□□ -0.48
CLN8-201ENST00000331222 FBXO31Q5XUX0 539 aaPredicted RBP12.08□□□□□ -0.48
CLN8-201ENST00000331222 BACH2Q9BYV9 841 aa12.08□□□□□ -0.48
CLN8-201ENST00000331222 MAEAQ7L5Y9 396 aa12.08□□□□□ -0.48
CLN8-201ENST00000331222 HELBQ8NG08 1087 aaPredicted RBP12.08□□□□□ -0.48
CLN8-201ENST00000331222 MRRFQ96E11 262 aaKnown RBP12.08□□□□□ -0.48
CLN8-201ENST00000331222 TTC21AQ8NDW8 1320 aa12.08□□□□□ -0.48
CLN8-201ENST00000331222 RFX1P22670 979 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 RASA3Q14644 834 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 GIMAP6Q6P9H5 292 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 TFCP2L1Q9NZI6 479 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 KIAA0753Q2KHM9 967 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 RRAGBQ5VZM2 374 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 CAPZA3Q96KX2 299 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 PLCB3Q01970 1234 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 WTAPQ15007 396 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 RAB3GAP1Q15042 981 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 CCDC25Q86WR0 208 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
CLN8-201ENST00000331222 PPP2R5DQ14738 602 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 STXBP4Q6ZWJ1 553 aa12.07□□□□□ -0.48
CLN8-201ENST00000331222 PI4KAP2A4QPH2 592 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 KRT9P35527 623 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 PI4KAP1Q8N8J0 262 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
CLN8-201ENST00000331222 ZKSCAN3Q9BRR0 538 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 NAPAP54920 295 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 CCDC152Q4G0S7 254 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 SMARCC2Q8TAQ2 1214 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 EIF6P56537 245 aaKnown RBP12.06□□□□□ -0.48
CLN8-201ENST00000331222 NIP7Q9Y221 180 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLN8-201ENST00000331222 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 HDAC9Q9UKV0 1011 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 ADCY5O95622 1261 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 HAUS7Q99871 368 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 ERCC5P28715 1186 aaPredicted RBP12.06□□□□□ -0.48
CLN8-201ENST00000331222 CLSTN2Q9H4D0 955 aa12.06□□□□□ -0.48
CLN8-201ENST00000331222 MCM7P33993 719 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 UAP1Q16222 522 aaPredicted RBP12.05□□□□□ -0.48
CLN8-201ENST00000331222 IQCGQ9H095 443 aaKnown RBP12.05□□□□□ -0.48
CLN8-201ENST00000331222 N4BP3O15049 544 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 SORBS3O60504 671 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 HMGB1P09429 215 aaKnown RBP12.05□□□□□ -0.48
CLN8-201ENST00000331222 FLIIQ13045 1269 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 GPIHBP1Q8IV16 184 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 SELENOSQ9BQE4 189 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 CHPF2Q9P2E5 772 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 KRT5P13647 590 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 NEK1Q96PY6 1258 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 KLF18A0A0U1RQI7 1052 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 FAM13AO94988 1023 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 DNAJC21Q5F1R6 531 aaKnown RBP12.05□□□□□ -0.48
CLN8-201ENST00000331222 NAA15Q9BXJ9 866 aaKnown RBP12.05□□□□□ -0.48
CLN8-201ENST00000331222 GBP3Q9H0R5 595 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 LIMCH1Q9UPQ0 1083 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 ARAP1Q96P48 1450 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 HSF2BPO75031 334 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 NCBP1Q09161 790 aaKnown RBP12.05□□□□□ -0.48
CLN8-201ENST00000331222 AMOTQ4VCS5 1084 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 RPAP2Q8IXW5 612 aaPredicted RBP12.05□□□□□ -0.48
CLN8-201ENST00000331222 POGZQ7Z3K3 1410 aa12.05□□□□□ -0.48
CLN8-201ENST00000331222 NCOA7Q8NI08 942 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 CCDC114Q96M63 670 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 MAGEB6Q8N7X4 407 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 EVI5LQ96CN4 794 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 SNW1Q13573 536 aaKnown RBP12.04□□□□□ -0.48
CLN8-201ENST00000331222 GEN1Q17RS7 908 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 ESPNB1AK53 854 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms