RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 ELF2Q15723 593 aa21.76■■□□□ 1.07
NPLOC4-201ENST00000331134 GIMAP7Q8NHV1 300 aa21.76■■□□□ 1.07
NPLOC4-201ENST00000331134 ATP2C2O75185 946 aa21.75■■□□□ 1.07
NPLOC4-201ENST00000331134 GSPT1P15170 499 aaKnown RBP21.75■■□□□ 1.07
NPLOC4-201ENST00000331134 ALG1Q9BT22 464 aa21.75■■□□□ 1.07
NPLOC4-201ENST00000331134 AKAP2Q9Y2D5 859 aa21.75■■□□□ 1.07
NPLOC4-201ENST00000331134 FEZ1Q99689 392 aa21.75■■□□□ 1.07
NPLOC4-201ENST00000331134 MSH6P52701 1360 aa21.75■■□□□ 1.07
NPLOC4-201ENST00000331134 SPECC1Q5M775 1068 aa21.75■■□□□ 1.07
NPLOC4-201ENST00000331134 BICDL1Q6ZP65 573 aa21.75■■□□□ 1.07
NPLOC4-201ENST00000331134 BMP2KQ9NSY1 1161 aaPredicted RBP21.75■■□□□ 1.07
NPLOC4-201ENST00000331134 CCDC196A0A1B0GTZ2 297 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 SPTLC2O15270 562 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 RHOXF2BP0C7M4 288 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 RHOXF2Q9BQY4 288 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 ZMYM4Q5VZL5 1548 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 VGLL3A8MV65 326 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 MTIF2P46199 727 aaKnown RBP21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 LRMPQ12912 555 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 THEMISQ8N1K5 641 aaPredicted RBP21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 ANTXR1Q9H6X2 564 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 TEX14Q8IWB6 1497 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 GOLGA6L9A6NEM1 432 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 IDEP14735 1019 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 RXRAP19793 462 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 SLC4A8Q2Y0W8 1093 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 CBX8Q9HC52 389 aa21.74■■□□□ 1.07
NPLOC4-201ENST00000331134 GPT2Q8TD30 523 aa21.73■■□□□ 1.07
NPLOC4-201ENST00000331134 PZPP20742 1482 aa21.73■■□□□ 1.07
NPLOC4-201ENST00000331134 PNMA6EA0A0J9YXQ4 647 aa21.73■■□□□ 1.07
NPLOC4-201ENST00000331134 KCNG4Q8TDN1 519 aa21.73■■□□□ 1.07
NPLOC4-201ENST00000331134 PPP1R9BQ96SB3 815 aa21.73■■□□□ 1.07
NPLOC4-201ENST00000331134 GOLGA6L7A0A1B0GV03 622 aa21.73■■□□□ 1.07
NPLOC4-201ENST00000331134 FKBP15Q5T1M5 1219 aa21.73■■□□□ 1.07
NPLOC4-201ENST00000331134 PTPDC1A2A3K4 754 aa21.73■■□□□ 1.07
NPLOC4-201ENST00000331134 TXLNBQ8N3L3 684 aa21.73■■□□□ 1.07
NPLOC4-201ENST00000331134 VPS18Q9P253 973 aa21.73■■□□□ 1.07
NPLOC4-201ENST00000331134 RTL1A6NKG5 1358 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 NCOA7Q8NI08 942 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 CTCFLQ8NI51 663 aaPredicted RBP21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 SOS1Q07889 1333 aaPredicted RBP21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 ANKRD62A6NC57 917 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 MYO1BO43795 1136 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 DNAJC21Q5F1R6 531 aaKnown RBP21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 LDHAL6AQ6ZMR3 332 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 RUFY3Q7L099 469 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 COPS6Q7L5N1 327 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 PALD1Q9ULE6 856 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 AMOTL2Q9Y2J4 779 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 COL17A1Q9UMD9 1497 aaPredicted RBP21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 NLRP5P59047 1200 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 CCDC178Q5BJE1 867 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 SNX14Q9Y5W7 946 aa21.72■■□□□ 1.07
NPLOC4-201ENST00000331134 GRM8O00222 908 aa21.71■■□□□ 1.07
NPLOC4-201ENST00000331134 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
NPLOC4-201ENST00000331134 CTAGE15A4D2H0 777 aa21.71■■□□□ 1.07
NPLOC4-201ENST00000331134 CTAGE8P0CG41 777 aa21.71■■□□□ 1.07
NPLOC4-201ENST00000331134 LMBR1LQ6UX01 489 aa21.71■■□□□ 1.07
NPLOC4-201ENST00000331134 CTAGE6Q86UF2 777 aa21.71■■□□□ 1.07
NPLOC4-201ENST00000331134 CTAGE4Q8IX94 777 aa21.71■■□□□ 1.07
NPLOC4-201ENST00000331134 OTUD7BQ6GQQ9 843 aa21.71■■□□□ 1.07
NPLOC4-201ENST00000331134 XAGE3Q8WTP9 111 aa21.71■■□□□ 1.07
NPLOC4-201ENST00000331134 KIF14Q15058 1648 aa21.71■■□□□ 1.07
NPLOC4-201ENST00000331134 BRD1O95696 1058 aa21.7■■□□□ 1.06
NPLOC4-201ENST00000331134 MCMDC2Q4G0Z9 681 aa21.7■■□□□ 1.06
NPLOC4-201ENST00000331134 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.7■■□□□ 1.06
NPLOC4-201ENST00000331134 USO1O60763 962 aaKnown RBP21.7■■□□□ 1.06
NPLOC4-201ENST00000331134 EVCP57679 992 aa21.7■■□□□ 1.06
NPLOC4-201ENST00000331134 ANKRD13DQ6ZTN6 518 aa21.7■■□□□ 1.06
NPLOC4-201ENST00000331134 DYDC1Q8WWB3 177 aa21.7■■□□□ 1.06
NPLOC4-201ENST00000331134 SPATA31E1Q6ZUB1 1445 aa21.7■■□□□ 1.06
NPLOC4-201ENST00000331134 MAP3K12Q12852 859 aa21.7■■□□□ 1.06
NPLOC4-201ENST00000331134 TICAM2Q86XR7 235 aa21.7■■□□□ 1.06
NPLOC4-201ENST00000331134 IFFO1Q0D2I5 559 aa21.69■■□□□ 1.06
NPLOC4-201ENST00000331134 NCOA5Q9HCD5 579 aaKnown RBP21.69■■□□□ 1.06
NPLOC4-201ENST00000331134 CUL7Q14999 1698 aa21.69■■□□□ 1.06
NPLOC4-201ENST00000331134 KLHDC4Q8TBB5 520 aa21.69■■□□□ 1.06
NPLOC4-201ENST00000331134 TTC21BQ7Z4L5 1316 aa21.69■■□□□ 1.06
NPLOC4-201ENST00000331134 CCDC129Q6ZRS4 1044 aa21.69■■□□□ 1.06
NPLOC4-201ENST00000331134 UBA5Q9GZZ9 404 aa21.69■■□□□ 1.06
NPLOC4-201ENST00000331134 FAM227BQ96M60 508 aa21.69■■□□□ 1.06
NPLOC4-201ENST00000331134 GOPCQ9HD26 462 aa21.69■■□□□ 1.06
NPLOC4-201ENST00000331134 NDUFB9Q9Y6M9 179 aa21.69■■□□□ 1.06
NPLOC4-201ENST00000331134 A0A1W2PP64 1363 aa21.68■■□□□ 1.06
NPLOC4-201ENST00000331134 AMOTQ4VCS5 1084 aa21.68■■□□□ 1.06
NPLOC4-201ENST00000331134 MAATS1Q7Z4T9 603 aa21.68■■□□□ 1.06
NPLOC4-201ENST00000331134 AKR1B10O60218 316 aa21.68■■□□□ 1.06
NPLOC4-201ENST00000331134 TRIM21P19474 475 aaKnown RBP21.68■■□□□ 1.06
NPLOC4-201ENST00000331134 IQCA1Q86XH1 822 aa21.68■■□□□ 1.06
NPLOC4-201ENST00000331134 CAPZA3Q96KX2 299 aa21.68■■□□□ 1.06
NPLOC4-201ENST00000331134 CC2D2AQ9P2K1 1620 aa21.68■■□□□ 1.06
NPLOC4-201ENST00000331134 CARD6Q9BX69 1037 aa21.68■■□□□ 1.06
NPLOC4-201ENST00000331134 ADGRL1O94910 1474 aa21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 BLMP54132 1417 aaPredicted RBP21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 CALRP27797 417 aaKnown RBP21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 SEPT7Q16181 437 aaKnown RBP21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 KCNH5Q8NCM2 988 aa21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 CCDC194A0A1B0GVG4 234 aa21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 UBA7P41226 1012 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms