RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 CTR9Q6PD62 1173 aa28.48■■■□□ 2.15
SOX1-201ENST00000330949 PPP1R13BQ96KQ4 1090 aa28.48■■■□□ 2.15
SOX1-201ENST00000330949 GIGYF1O75420 1035 aaPredicted RBP28.47■■■□□ 2.15
SOX1-201ENST00000330949 KCNJ6P48051 423 aa28.47■■■□□ 2.15
SOX1-201ENST00000330949 E4F1Q66K89 784 aaPredicted RBP28.47■■■□□ 2.15
SOX1-201ENST00000330949 SSH3Q8TE77 659 aa28.47■■■□□ 2.15
SOX1-201ENST00000330949 ORC3Q9UBD5 711 aaPredicted RBP28.47■■■□□ 2.15
SOX1-201ENST00000330949 AMPHP49418 695 aa28.47■■■□□ 2.15
SOX1-201ENST00000330949 TPM1P09493 284 aa28.46■■■□□ 2.15
SOX1-201ENST00000330949 ZSCAN26Q16670 478 aa28.46■■■□□ 2.15
SOX1-201ENST00000330949 LRRN4CLQ8ND94 238 aa28.46■■■□□ 2.15
SOX1-201ENST00000330949 NGDNQ8NEJ9 315 aaKnown RBP28.46■■■□□ 2.15
SOX1-201ENST00000330949 CRB1P82279 1406 aa28.46■■■□□ 2.15
SOX1-201ENST00000330949 NRDCO43847 1150 aa28.46■■■□□ 2.15
SOX1-201ENST00000330949 UBXN6Q9BZV1 441 aa28.46■■■□□ 2.15
SOX1-201ENST00000330949 HDGFP51858 240 aaKnown RBP28.45■■■□□ 2.15
SOX1-201ENST00000330949 DHX8Q14562 1220 aaKnown RBP28.45■■■□□ 2.15
SOX1-201ENST00000330949 RHPN1Q8TCX5 695 aa28.45■■■□□ 2.15
SOX1-201ENST00000330949 MYO1CO00159 1063 aa28.45■■■□□ 2.14
SOX1-201ENST00000330949 CCDC150Q8NCX0 1101 aa28.45■■■□□ 2.14
SOX1-201ENST00000330949 SMARCE1Q969G3 411 aa28.45■■■□□ 2.14
SOX1-201ENST00000330949 SRRTQ9BXP5 876 aaKnown RBP28.45■■■□□ 2.14
SOX1-201ENST00000330949 PTH1RQ03431 593 aa28.44■■■□□ 2.14
SOX1-201ENST00000330949 CRYBG1Q9Y4K1 1723 aa28.44■■■□□ 2.14
SOX1-201ENST00000330949 ADAMTS13Q76LX8 1427 aa28.44■■■□□ 2.14
SOX1-201ENST00000330949 SURF6O75683 361 aaKnown RBP28.44■■■□□ 2.14
SOX1-201ENST00000330949 FLIIQ13045 1269 aa28.44■■■□□ 2.14
SOX1-201ENST00000330949 ANKRD1Q15327 319 aa28.44■■■□□ 2.14
SOX1-201ENST00000330949 PAXIP1Q6ZW49 1069 aaPredicted RBP28.44■■■□□ 2.14
SOX1-201ENST00000330949 LARP1Q6PKG0 1096 aaKnown RBP28.43■■■□□ 2.14
SOX1-201ENST00000330949 CERS3Q8IU89 383 aa28.43■■■□□ 2.14
SOX1-201ENST00000330949 NFATC2IPQ8NCF5 419 aa28.43■■■□□ 2.14
SOX1-201ENST00000330949 ANO10Q9NW15 660 aa28.43■■■□□ 2.14
SOX1-201ENST00000330949 UBTFL1P0CB47 393 aaPredicted RBP28.43■■■□□ 2.14
SOX1-201ENST00000330949 C14orf37Q86TY3 774 aa28.43■■■□□ 2.14
SOX1-201ENST00000330949 DHX40Q8IX18 779 aaKnown RBP28.43■■■□□ 2.14
SOX1-201ENST00000330949 CCDC191Q8NCU4 936 aa28.43■■■□□ 2.14
SOX1-201ENST00000330949 C3P01024 1663 aa28.43■■■□□ 2.14
SOX1-201ENST00000330949 MON2Q7Z3U7 1717 aa28.43■■■□□ 2.14
SOX1-201ENST00000330949 PSMA5P28066 241 aa28.42■■■□□ 2.14
SOX1-201ENST00000330949 ST5P78524 1137 aa28.42■■■□□ 2.14
SOX1-201ENST00000330949 NECTIN1Q15223 517 aa28.42■■■□□ 2.14
SOX1-201ENST00000330949 MNS1Q8NEH6 495 aa28.42■■■□□ 2.14
SOX1-201ENST00000330949 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.42■■■□□ 2.14
SOX1-201ENST00000330949 CASQ1P31415 396 aa28.42■■■□□ 2.14
SOX1-201ENST00000330949 AK7Q96M32 723 aa28.42■■■□□ 2.14
SOX1-201ENST00000330949 CFAP45Q9UL16 551 aa28.42■■■□□ 2.14
SOX1-201ENST00000330949 XRN1Q8IZH2 1706 aaKnown RBP28.42■■■□□ 2.14
SOX1-201ENST00000330949 TECPR2O15040 1411 aa28.41■■■□□ 2.14
SOX1-201ENST00000330949 MAP3K5Q99683 1374 aa28.41■■■□□ 2.14
SOX1-201ENST00000330949 PHLPP2Q6ZVD8 1323 aa28.41■■■□□ 2.14
SOX1-201ENST00000330949 NOP2P46087 812 aaKnown RBP28.41■■■□□ 2.14
SOX1-201ENST00000330949 CEP57L1Q8IYX8 460 aa28.41■■■□□ 2.14
SOX1-201ENST00000330949 SIRT1Q96EB6 747 aa28.41■■■□□ 2.14
SOX1-201ENST00000330949 CCP110O43303 1012 aa28.41■■■□□ 2.14
SOX1-201ENST00000330949 RGS22Q8NE09 1264 aa28.41■■■□□ 2.14
SOX1-201ENST00000330949 GLRX3O76003 335 aaKnown RBP28.4■■■□□ 2.14
SOX1-201ENST00000330949 OAS2P29728 719 aaKnown RBP28.4■■■□□ 2.14
SOX1-201ENST00000330949 C10orf67Q8IYJ2 551 aa28.4■■■□□ 2.14
SOX1-201ENST00000330949 NAT10Q9H0A0 1025 aaKnown RBP28.4■■■□□ 2.14
SOX1-201ENST00000330949 GOLGA5Q8TBA6 731 aa28.4■■■□□ 2.14
SOX1-201ENST00000330949 NRKQ7Z2Y5 1582 aa28.4■■■□□ 2.14
SOX1-201ENST00000330949 ETF1P62495 437 aaKnown RBP28.39■■■□□ 2.14
SOX1-201ENST00000330949 CCDC158Q5M9N0 1113 aa28.39■■■□□ 2.14
SOX1-201ENST00000330949 HOMER1Q86YM7 354 aa28.39■■■□□ 2.14
SOX1-201ENST00000330949 EYA1Q99502 592 aa28.39■■■□□ 2.14
SOX1-201ENST00000330949 ITSN1Q15811 1721 aa28.39■■■□□ 2.14
SOX1-201ENST00000330949 TTC41PQ6P2S7 1318 aa28.39■■■□□ 2.14
SOX1-201ENST00000330949 EFCAB8A8MWE9 144 aa28.39■■■□□ 2.14
SOX1-201ENST00000330949 DHX16O60231 1041 aaKnown RBP28.39■■■□□ 2.14
SOX1-201ENST00000330949 AMOTL2Q9Y2J4 779 aa28.39■■■□□ 2.14
SOX1-201ENST00000330949 PTPRUQ92729 1446 aa28.38■■■□□ 2.13
SOX1-201ENST00000330949 SFPQP23246 707 aaKnown RBP eCLIP28.38■■■□□ 2.13
SOX1-201ENST00000330949 USP44Q9H0E7 712 aa28.38■■■□□ 2.13
SOX1-201ENST00000330949 USHBP1Q8N6Y0 703 aa28.38■■■□□ 2.13
SOX1-201ENST00000330949 USP42Q9H9J4 1324 aaKnown RBP28.38■■■□□ 2.13
SOX1-201ENST00000330949 PLEKHG3A1L390 1219 aa28.38■■■□□ 2.13
SOX1-201ENST00000330949 NBPF11Q86T75 865 aa28.38■■■□□ 2.13
SOX1-201ENST00000330949 N4BP2Q86UW6 1770 aaPredicted RBP28.37■■■□□ 2.13
SOX1-201ENST00000330949 SMC1AQ14683 1233 aaKnown RBP28.37■■■□□ 2.13
SOX1-201ENST00000330949 GORABQ5T7V8 394 aa28.37■■■□□ 2.13
SOX1-201ENST00000330949 GEMIN8Q9NWZ8 242 aaKnown RBP28.37■■■□□ 2.13
SOX1-201ENST00000330949 ADCY9O60503 1353 aa28.37■■■□□ 2.13
SOX1-201ENST00000330949 POLA2Q14181 598 aa28.37■■■□□ 2.13
SOX1-201ENST00000330949 CCDC30Q5VVM6 783 aa28.37■■■□□ 2.13
SOX1-201ENST00000330949 CREB3L3Q68CJ9 461 aa28.37■■■□□ 2.13
SOX1-201ENST00000330949 PPP1R42Q7Z4L9 355 aa28.37■■■□□ 2.13
SOX1-201ENST00000330949 FBXO18Q8NFZ0 1043 aa28.37■■■□□ 2.13
SOX1-201ENST00000330949 DDX54Q8TDD1 881 aaKnown RBP28.37■■■□□ 2.13
SOX1-201ENST00000330949 PSD3Q9NYI0 1048 aa28.37■■■□□ 2.13
SOX1-201ENST00000330949 AKAP12Q02952 1782 aa28.36■■■□□ 2.13
SOX1-201ENST00000330949 RIMS1Q86UR5 1692 aaKnown RBP28.36■■■□□ 2.13
SOX1-201ENST00000330949 PEAK1Q9H792 1746 aa28.36■■■□□ 2.13
SOX1-201ENST00000330949 TADA3O75528 432 aa28.36■■■□□ 2.13
SOX1-201ENST00000330949 GOLGA6L1Q8N7Z2 621 aa28.36■■■□□ 2.13
SOX1-201ENST00000330949 ZSCAN16Q9H4T2 348 aaPredicted RBP28.36■■■□□ 2.13
SOX1-201ENST00000330949 USP6P35125 1406 aa28.36■■■□□ 2.13
SOX1-201ENST00000330949 PXDNLA1KZ92 1463 aa28.36■■■□□ 2.13
SOX1-201ENST00000330949 NLRP6P59044 892 aa28.36■■■□□ 2.13
SOX1-201ENST00000330949 AOPEPQ8N6M6 819 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms