RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 ARMCX5Q6P1M9 558 aa23.99■■□□□ 1.43
CMTM4-201ENST00000330687 NFATC2IPQ8NCF5 419 aa23.99■■□□□ 1.43
CMTM4-201ENST00000330687 GOLPH3LQ9H4A5 285 aa23.99■■□□□ 1.43
CMTM4-201ENST00000330687 AACSQ86V21 672 aa23.98■■□□□ 1.43
CMTM4-201ENST00000330687 GLRX3O76003 335 aaKnown RBP23.98■■□□□ 1.43
CMTM4-201ENST00000330687 CCDC30Q5VVM6 783 aa23.98■■□□□ 1.43
CMTM4-201ENST00000330687 RGS22Q8NE09 1264 aa23.98■■□□□ 1.43
CMTM4-201ENST00000330687 FAM53CQ9NYF3 392 aa23.98■■□□□ 1.43
CMTM4-201ENST00000330687 CFAP45Q9UL16 551 aa23.98■■□□□ 1.43
CMTM4-201ENST00000330687 ETF1P62495 437 aaKnown RBP23.98■■□□□ 1.43
CMTM4-201ENST00000330687 NMIQ13287 307 aaPredicted RBP23.98■■□□□ 1.43
CMTM4-201ENST00000330687 DHX40Q8IX18 779 aaKnown RBP23.98■■□□□ 1.43
CMTM4-201ENST00000330687 TTC21AQ8NDW8 1320 aa23.98■■□□□ 1.43
CMTM4-201ENST00000330687 CDC25BP30305 580 aa23.97■■□□□ 1.43
CMTM4-201ENST00000330687 SERPINC1P01008 464 aa23.97■■□□□ 1.43
CMTM4-201ENST00000330687 TTLL5Q6EMB2 1281 aa23.97■■□□□ 1.43
CMTM4-201ENST00000330687 LTV1Q96GA3 475 aaPredicted RBP23.97■■□□□ 1.43
CMTM4-201ENST00000330687 ADAM21Q9UKJ8 722 aa23.97■■□□□ 1.43
CMTM4-201ENST00000330687 KIAA1210Q9ULL0 1709 aa23.97■■□□□ 1.43
CMTM4-201ENST00000330687 DPCR1Q3MIW9 517 aa23.97■■□□□ 1.43
CMTM4-201ENST00000330687 CFAP100Q494V2 611 aa23.97■■□□□ 1.43
CMTM4-201ENST00000330687 KIF1BO60333 1816 aa23.97■■□□□ 1.43
CMTM4-201ENST00000330687 APPP05067 770 aa23.96■■□□□ 1.43
CMTM4-201ENST00000330687 SLC27A2O14975 620 aa23.96■■□□□ 1.43
CMTM4-201ENST00000330687 ZFYVE9O95405 1425 aa23.96■■□□□ 1.43
CMTM4-201ENST00000330687 RPGRIP1LQ68CZ1 1315 aa23.95■■□□□ 1.43
CMTM4-201ENST00000330687 SECISBP2LQ93073 1101 aaKnown RBP23.95■■□□□ 1.42
CMTM4-201ENST00000330687 WWC2Q6AWC2 1192 aa23.95■■□□□ 1.42
CMTM4-201ENST00000330687 CREBRFQ8IUR6 639 aa23.95■■□□□ 1.42
CMTM4-201ENST00000330687 TAF7Q15545 349 aaPredicted RBP23.94■■□□□ 1.42
CMTM4-201ENST00000330687 HDGFL1Q5TGJ6 251 aa23.94■■□□□ 1.42
CMTM4-201ENST00000330687 FOXR1Q6PIV2 292 aa23.94■■□□□ 1.42
CMTM4-201ENST00000330687 CCDC102AQ96A19 550 aa23.94■■□□□ 1.42
CMTM4-201ENST00000330687 NDUFB9Q9Y6M9 179 aa23.94■■□□□ 1.42
CMTM4-201ENST00000330687 KARSQ15046 597 aaKnown RBP23.94■■□□□ 1.42
CMTM4-201ENST00000330687 MTHFSDQ2M296 383 aaKnown RBP23.94■■□□□ 1.42
CMTM4-201ENST00000330687 EDC3Q96F86 508 aaKnown RBP23.94■■□□□ 1.42
CMTM4-201ENST00000330687 USP28Q96RU2 1077 aa23.94■■□□□ 1.42
CMTM4-201ENST00000330687 PUF60Q9UHX1 559 aaKnown RBP23.94■■□□□ 1.42
CMTM4-201ENST00000330687 L2HGDHQ9H9P8 463 aa23.94■■□□□ 1.42
CMTM4-201ENST00000330687 TET3O43151 1660 aa23.94■■□□□ 1.42
CMTM4-201ENST00000330687 MROH2AA6NES4 1674 aa23.93■■□□□ 1.42
CMTM4-201ENST00000330687 TBC1D8O95759 1140 aa23.93■■□□□ 1.42
CMTM4-201ENST00000330687 SARM1Q6SZW1 724 aa23.93■■□□□ 1.42
CMTM4-201ENST00000330687 GPATCH3Q96I76 525 aa23.93■■□□□ 1.42
CMTM4-201ENST00000330687 ADGRB1O14514 1584 aa23.93■■□□□ 1.42
CMTM4-201ENST00000330687 ATP1A3P13637 1013 aa23.93■■□□□ 1.42
CMTM4-201ENST00000330687 NBPF11Q86T75 865 aa23.93■■□□□ 1.42
CMTM4-201ENST00000330687 SEC62Q99442 399 aaKnown RBP23.93■■□□□ 1.42
CMTM4-201ENST00000330687 TTC31Q49AM3 519 aaPredicted RBP23.92■■□□□ 1.42
CMTM4-201ENST00000330687 NOM1Q5C9Z4 860 aaKnown RBP23.92■■□□□ 1.42
CMTM4-201ENST00000330687 CC2D1AQ6P1N0 951 aaPredicted RBP23.92■■□□□ 1.42
CMTM4-201ENST00000330687 ZRANB2O95218 330 aaKnown RBP eCLIP23.92■■□□□ 1.42
CMTM4-201ENST00000330687 POLR3DP05423 398 aaPredicted RBP23.92■■□□□ 1.42
CMTM4-201ENST00000330687 NPATQ14207 1427 aa23.91■■□□□ 1.42
CMTM4-201ENST00000330687 CAVIN2O95810 425 aa23.91■■□□□ 1.42
CMTM4-201ENST00000330687 OTUD7BQ6GQQ9 843 aa23.91■■□□□ 1.42
CMTM4-201ENST00000330687 SRLQ86TD4 932 aa23.91■■□□□ 1.42
CMTM4-201ENST00000330687 STK11IPQ8N1F8 1099 aa23.91■■□□□ 1.42
CMTM4-201ENST00000330687 CCDC150Q8NCX0 1101 aa23.91■■□□□ 1.42
CMTM4-201ENST00000330687 EFCC1Q9HA90 598 aa23.91■■□□□ 1.42
CMTM4-201ENST00000330687 ECHDC1Q9NTX5 307 aa23.91■■□□□ 1.42
CMTM4-201ENST00000330687 PDE11AQ9HCR9 933 aa23.91■■□□□ 1.42
CMTM4-201ENST00000330687 NECTIN1Q15223 517 aa23.91■■□□□ 1.42
CMTM4-201ENST00000330687 PARD6BQ9BYG5 372 aa23.91■■□□□ 1.42
CMTM4-201ENST00000330687 NCOA5Q9HCD5 579 aaKnown RBP23.91■■□□□ 1.42
CMTM4-201ENST00000330687 RNF216Q9NWF9 866 aaPredicted RBP23.91■■□□□ 1.42
CMTM4-201ENST00000330687 A0A0D9SFI3 127 aa23.9■■□□□ 1.42
CMTM4-201ENST00000330687 ICE2Q659A1 982 aa23.9■■□□□ 1.42
CMTM4-201ENST00000330687 RABEP2Q9H5N1 569 aa23.9■■□□□ 1.42
CMTM4-201ENST00000330687 PPP2R3AQ06190 1150 aa23.9■■□□□ 1.42
CMTM4-201ENST00000330687 Q6ZUG5 572 aa23.9■■□□□ 1.42
CMTM4-201ENST00000330687 TXNDC2Q86VQ3 553 aa23.9■■□□□ 1.42
CMTM4-201ENST00000330687 SSH3Q8TE77 659 aa23.9■■□□□ 1.42
CMTM4-201ENST00000330687 ABCC1P33527 1531 aa23.9■■□□□ 1.42
CMTM4-201ENST00000330687 ANKRD1Q15327 319 aa23.9■■□□□ 1.42
CMTM4-201ENST00000330687 RAB11FIP4Q86YS3 637 aa23.9■■□□□ 1.42
CMTM4-201ENST00000330687 C9orf78Q9NZ63 289 aaPredicted RBP23.9■■□□□ 1.42
CMTM4-201ENST00000330687 TADA3O75528 432 aa23.89■■□□□ 1.42
CMTM4-201ENST00000330687 RBM43Q6ZSC3 357 aaKnown RBP23.89■■□□□ 1.42
CMTM4-201ENST00000330687 ABCC3O15438 1527 aa23.89■■□□□ 1.42
CMTM4-201ENST00000330687 CTAGE5O15320 804 aa23.89■■□□□ 1.41
CMTM4-201ENST00000330687 RPS6KB1P23443 525 aa23.89■■□□□ 1.41
CMTM4-201ENST00000330687 CHST3Q7LGC8 479 aa23.89■■□□□ 1.41
CMTM4-201ENST00000330687 JRKLQ9Y4A0 524 aa23.89■■□□□ 1.41
CMTM4-201ENST00000330687 H3BQF6 201 aa23.88■■□□□ 1.41
CMTM4-201ENST00000330687 TOB2Q14106 344 aaPredicted RBP23.88■■□□□ 1.41
CMTM4-201ENST00000330687 FBXO18Q8NFZ0 1043 aa23.88■■□□□ 1.41
CMTM4-201ENST00000330687 GLI2P10070 1586 aa23.88■■□□□ 1.41
CMTM4-201ENST00000330687 RESTQ13127 1097 aa23.88■■□□□ 1.41
CMTM4-201ENST00000330687 DESI2Q9BSY9 194 aa23.88■■□□□ 1.41
CMTM4-201ENST00000330687 SUGCTQ9HAC7 445 aa23.88■■□□□ 1.41
CMTM4-201ENST00000330687 TEFQ10587 303 aa23.88■■□□□ 1.41
CMTM4-201ENST00000330687 STK38Q15208 465 aa23.88■■□□□ 1.41
CMTM4-201ENST00000330687 LRRFIP1Q32MZ4 808 aaKnown RBP23.88■■□□□ 1.41
CMTM4-201ENST00000330687 GOLGA5Q8TBA6 731 aa23.88■■□□□ 1.41
CMTM4-201ENST00000330687 DEF6Q9H4E7 631 aa23.88■■□□□ 1.41
CMTM4-201ENST00000330687 ZFYVE16Q7Z3T8 1539 aa23.87■■□□□ 1.41
CMTM4-201ENST00000330687 NOP2P46087 812 aaKnown RBP23.87■■□□□ 1.41
CMTM4-201ENST00000330687 CCDC12Q8WUD4 166 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms