RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 ERVV-1B6SEH8 477 aa12.4□□□□□ -0.42
GDF3-201ENST00000329913 RAD17O75943 681 aa12.4□□□□□ -0.42
GDF3-201ENST00000329913 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
GDF3-201ENST00000329913 HOXA10P31260 410 aaPredicted RBP12.4□□□□□ -0.42
GDF3-201ENST00000329913 GMPSP49915 693 aaPredicted RBP12.4□□□□□ -0.42
GDF3-201ENST00000329913 FAM161AQ3B820 660 aa12.4□□□□□ -0.42
GDF3-201ENST00000329913 COL4A1P02462 1669 aa12.39□□□□□ -0.43
GDF3-201ENST00000329913 CXCL9Q07325 125 aa12.39□□□□□ -0.43
GDF3-201ENST00000329913 PDIA6Q15084 440 aa12.39□□□□□ -0.43
GDF3-201ENST00000329913 GIGYF2Q6Y7W6 1299 aaKnown RBP12.39□□□□□ -0.43
GDF3-201ENST00000329913 LRP10Q7Z4F1 713 aa12.39□□□□□ -0.43
GDF3-201ENST00000329913 TRPM4Q8TD43 1214 aa12.39□□□□□ -0.43
GDF3-201ENST00000329913 MAPK8IP3Q9UPT6 1336 aa12.38□□□□□ -0.43
GDF3-201ENST00000329913 TAF1P21675 1872 aa12.38□□□□□ -0.43
GDF3-201ENST00000329913 CCDC85CA6NKD9 419 aa12.38□□□□□ -0.43
GDF3-201ENST00000329913 CELF2O95319 508 aaKnown RBP12.38□□□□□ -0.43
GDF3-201ENST00000329913 NEFMP07197 916 aa12.38□□□□□ -0.43
GDF3-201ENST00000329913 CCDC146Q8IYE0 955 aa12.38□□□□□ -0.43
GDF3-201ENST00000329913 PNISRQ8TF01 805 aaKnown RBP12.38□□□□□ -0.43
GDF3-201ENST00000329913 XAGE3Q8WTP9 111 aa12.38□□□□□ -0.43
GDF3-201ENST00000329913 GPR101Q96P66 508 aaPredicted RBP12.38□□□□□ -0.43
GDF3-201ENST00000329913 CRAMP1Q96RY5 1269 aa12.38□□□□□ -0.43
GDF3-201ENST00000329913 UTP14AQ9BVJ6 771 aaKnown RBP12.38□□□□□ -0.43
GDF3-201ENST00000329913 LAMB2P55268 1798 aa12.38□□□□□ -0.43
GDF3-201ENST00000329913 RGL2O15211 777 aa12.37□□□□□ -0.43
GDF3-201ENST00000329913 NEUROD2Q15784 382 aa12.37□□□□□ -0.43
GDF3-201ENST00000329913 RTL5Q5HYW3 569 aaPredicted RBP12.37□□□□□ -0.43
GDF3-201ENST00000329913 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
GDF3-201ENST00000329913 NLRP3Q96P20 1036 aa12.37□□□□□ -0.43
GDF3-201ENST00000329913 ZIC5Q96T25 663 aa12.37□□□□□ -0.43
GDF3-201ENST00000329913 GPRC5DQ9NZD1 345 aa12.37□□□□□ -0.43
GDF3-201ENST00000329913 ATP6V0A2Q9Y487 856 aa12.37□□□□□ -0.43
GDF3-201ENST00000329913 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
GDF3-201ENST00000329913 THSD7BQ9C0I4 1608 aa12.37□□□□□ -0.43
GDF3-201ENST00000329913 YDJCA8MPS7 323 aa12.36□□□□□ -0.43
GDF3-201ENST00000329913 HIRAP54198 1017 aaPredicted RBP12.36□□□□□ -0.43
GDF3-201ENST00000329913 RIPK4P57078 832 aa12.36□□□□□ -0.43
GDF3-201ENST00000329913 MAP2K1Q02750 393 aaPredicted RBP12.36□□□□□ -0.43
GDF3-201ENST00000329913 CC2D2BQ6DHV5 1058 aa12.36□□□□□ -0.43
GDF3-201ENST00000329913 DPP8Q6V1X1 898 aaPredicted RBP12.36□□□□□ -0.43
GDF3-201ENST00000329913 COPS6Q7L5N1 327 aa12.36□□□□□ -0.43
GDF3-201ENST00000329913 PPP1R42Q7Z4L9 355 aa12.36□□□□□ -0.43
GDF3-201ENST00000329913 LAS1LQ9Y4W2 734 aaKnown RBP12.36□□□□□ -0.43
GDF3-201ENST00000329913 TLL2Q9Y6L7 1015 aa12.36□□□□□ -0.43
GDF3-201ENST00000329913 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
GDF3-201ENST00000329913 USP50Q70EL3 339 aaPredicted RBP12.35□□□□□ -0.43
GDF3-201ENST00000329913 NLRP10Q86W26 655 aa12.35□□□□□ -0.43
GDF3-201ENST00000329913 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
GDF3-201ENST00000329913 ADARB2Q9NS39 739 aaKnown RBP12.35□□□□□ -0.43
GDF3-201ENST00000329913 ZBTB47Q9UFB7 747 aaPredicted RBP12.35□□□□□ -0.43
GDF3-201ENST00000329913 TRMT112Q9UI30 125 aaKnown RBP12.35□□□□□ -0.43
GDF3-201ENST00000329913 ZNRF3Q9ULT6 936 aa12.35□□□□□ -0.43
GDF3-201ENST00000329913 DUOX1Q9NRD9 1551 aa12.35□□□□□ -0.43
GDF3-201ENST00000329913 EGFRP00533 1210 aa12.34□□□□□ -0.43
GDF3-201ENST00000329913 PARP10Q53GL7 1025 aa12.34□□□□□ -0.43
GDF3-201ENST00000329913 CIAPIN1Q6FI81 312 aa12.34□□□□□ -0.43
GDF3-201ENST00000329913 MPNDQ8N594 471 aa12.34□□□□□ -0.43
GDF3-201ENST00000329913 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
GDF3-201ENST00000329913 KCNQ5Q9NR82 932 aa12.34□□□□□ -0.43
GDF3-201ENST00000329913 TRPM7Q96QT4 1865 aa12.34□□□□□ -0.43
GDF3-201ENST00000329913 ATP5J2-PTCD1G3V325 749 aa12.33□□□□□ -0.44
GDF3-201ENST00000329913 TBC1D10BQ4KMP7 808 aaPredicted RBP12.33□□□□□ -0.44
GDF3-201ENST00000329913 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
GDF3-201ENST00000329913 SAMD7Q7Z3H4 446 aa12.33□□□□□ -0.44
GDF3-201ENST00000329913 SAPCD2Q86UD0 394 aa12.33□□□□□ -0.44
GDF3-201ENST00000329913 USP48Q86UV5 1035 aa12.33□□□□□ -0.44
GDF3-201ENST00000329913 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
GDF3-201ENST00000329913 BEGAINQ9BUH8 593 aa12.33□□□□□ -0.44
GDF3-201ENST00000329913 TMX4Q9H1E5 349 aaPredicted RBP12.33□□□□□ -0.44
GDF3-201ENST00000329913 CHPF2Q9P2E5 772 aa12.33□□□□□ -0.44
GDF3-201ENST00000329913 ANKRD36CQ5JPF3 1778 aa12.33□□□□□ -0.44
GDF3-201ENST00000329913 ADM5C9JUS6 153 aa12.32□□□□□ -0.44
GDF3-201ENST00000329913 ECE1P42892 770 aa12.32□□□□□ -0.44
GDF3-201ENST00000329913 KIAA2012Q0VF49 1180 aa12.32□□□□□ -0.44
GDF3-201ENST00000329913 DOK7Q18PE1 504 aa12.32□□□□□ -0.44
GDF3-201ENST00000329913 SLC10A5Q5PT55 438 aa12.32□□□□□ -0.44
GDF3-201ENST00000329913 DDX46Q7L014 1031 aaKnown RBP12.32□□□□□ -0.44
GDF3-201ENST00000329913 CELF1Q92879 486 aaKnown RBP12.32□□□□□ -0.44
GDF3-201ENST00000329913 ASTN2O75129 1339 aaPredicted RBP12.32□□□□□ -0.44
GDF3-201ENST00000329913 ERBB4Q15303 1308 aa12.32□□□□□ -0.44
GDF3-201ENST00000329913 TNRC18O15417 2968 aaPredicted RBP12.31□□□□□ -0.44
GDF3-201ENST00000329913 PSMD14O00487 310 aa12.31□□□□□ -0.44
GDF3-201ENST00000329913 TMPOP42166 694 aaKnown RBP12.31□□□□□ -0.44
GDF3-201ENST00000329913 GRAPQ13588 217 aa12.31□□□□□ -0.44
GDF3-201ENST00000329913 SP8Q8IXZ3 490 aa12.31□□□□□ -0.44
GDF3-201ENST00000329913 GRAPLQ8TC17 118 aaPredicted RBP12.31□□□□□ -0.44
GDF3-201ENST00000329913 SPOCK2Q92563 424 aa12.31□□□□□ -0.44
GDF3-201ENST00000329913 JARID2Q92833 1246 aaPredicted RBP12.31□□□□□ -0.44
GDF3-201ENST00000329913 FAM89AQ96GI7 184 aa12.31□□□□□ -0.44
GDF3-201ENST00000329913 RTFDC1Q9BY42 306 aaPredicted RBP12.31□□□□□ -0.44
GDF3-201ENST00000329913 MCOLN1Q9GZU1 580 aa12.31□□□□□ -0.44
GDF3-201ENST00000329913 CNOT7Q9UIV1 285 aaKnown RBP12.31□□□□□ -0.44
GDF3-201ENST00000329913 DDX60Q8IY21 1712 aaKnown RBP12.31□□□□□ -0.44
GDF3-201ENST00000329913 CASP8AP2Q9UKL3 1982 aa12.3□□□□□ -0.44
GDF3-201ENST00000329913 GPSM2P81274 684 aa12.3□□□□□ -0.44
GDF3-201ENST00000329913 SUPT20HQ8NEM7 779 aa12.3□□□□□ -0.44
GDF3-201ENST00000329913 CCDC85AQ96PX6 553 aaPredicted RBP12.3□□□□□ -0.44
GDF3-201ENST00000329913 SCAF8Q9UPN6 1271 aaKnown RBP12.3□□□□□ -0.44
GDF3-201ENST00000329913 SH3TC1Q8TE82 1336 aa12.3□□□□□ -0.44
GDF3-201ENST00000329913 C6orf229H3BNL8 230 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms