RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 FILIP1Q7Z7B0 1213 aa13.87□□□□□ -0.19
SHMT2-201ENST00000328923 TRIM5Q9C035 493 aa13.87□□□□□ -0.19
SHMT2-201ENST00000328923 ORC3Q9UBD5 711 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-201ENST00000328923 AATKQ6ZMQ8 1374 aa13.87□□□□□ -0.19
SHMT2-201ENST00000328923 UBAP1LF5GYI3 381 aa13.87□□□□□ -0.19
SHMT2-201ENST00000328923 NOL8Q76FK4 1167 aaKnown RBP13.87□□□□□ -0.19
SHMT2-201ENST00000328923 ATP10DQ9P241 1426 aa13.87□□□□□ -0.19
SHMT2-201ENST00000328923 ROBO2Q9HCK4 1378 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 TPM1P09493 284 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 GNAI1P63096 354 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 MICALL1Q8N3F8 863 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 FAM200AQ8TCP9 573 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 KAT2BQ92831 832 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 SYTL4Q96C24 671 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-201ENST00000328923 L2HGDHQ9H9P8 463 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 ERC2O15083 957 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 NEBLO76041 1014 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 SDSP20132 328 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 TADA2BQ86TJ2 420 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 PLA2G4DQ86XP0 818 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 TMEM87AQ8NBN3 555 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 CLIP2Q9UDT6 1046 aa13.86□□□□□ -0.19
SHMT2-201ENST00000328923 CPSF1Q10570 1443 aaKnown RBP13.85□□□□□ -0.19
SHMT2-201ENST00000328923 H3BQF6 201 aa13.85□□□□□ -0.19
SHMT2-201ENST00000328923 CCDC192P0DO97 292 aa13.85□□□□□ -0.19
SHMT2-201ENST00000328923 UBE2HP62256 183 aa13.85□□□□□ -0.19
SHMT2-201ENST00000328923 ANKRD44Q8N8A2 993 aa13.85□□□□□ -0.19
SHMT2-201ENST00000328923 PRPF38AQ8NAV1 312 aaKnown RBP13.85□□□□□ -0.19
SHMT2-201ENST00000328923 GORABQ5T7V8 394 aa13.85□□□□□ -0.19
SHMT2-201ENST00000328923 LRRC8AQ8IWT6 810 aa13.85□□□□□ -0.19
SHMT2-201ENST00000328923 RPAP2Q8IXW5 612 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-201ENST00000328923 EFCAB13Q8IY85 973 aa13.85□□□□□ -0.19
SHMT2-201ENST00000328923 ITFG2Q969R8 447 aa13.85□□□□□ -0.19
SHMT2-201ENST00000328923 MIEF2Q96C03 454 aa13.85□□□□□ -0.19
SHMT2-201ENST00000328923 IL17RAQ96F46 866 aa13.85□□□□□ -0.19
SHMT2-201ENST00000328923 BSDC1Q9NW68 430 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-201ENST00000328923 RBM5P52756 815 aaKnown RBP eCLIP13.84□□□□□ -0.19
SHMT2-201ENST00000328923 ZRSR1Q15695 479 aaKnown RBP13.84□□□□□ -0.19
SHMT2-201ENST00000328923 CCDC93Q567U6 631 aa13.84□□□□□ -0.19
SHMT2-201ENST00000328923 ZC3H12AQ5D1E8 599 aaKnown RBP13.84□□□□□ -0.19
SHMT2-201ENST00000328923 ZNF513Q8N8E2 541 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-201ENST00000328923 NUDT16Q96DE0 195 aaKnown RBP13.84□□□□□ -0.19
SHMT2-201ENST00000328923 SRCIN1Q9C0H9 1055 aa13.84□□□□□ -0.19
SHMT2-201ENST00000328923 PLEKHA4Q9H4M7 779 aa13.84□□□□□ -0.19
SHMT2-201ENST00000328923 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.84□□□□□ -0.19
SHMT2-201ENST00000328923 TUBGCP6Q96RT7 1819 aa13.84□□□□□ -0.19
SHMT2-201ENST00000328923 PAX7P23759 505 aa13.84□□□□□ -0.19
SHMT2-201ENST00000328923 ARID4AP29374 1257 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-201ENST00000328923 NEK4P51957 841 aa13.84□□□□□ -0.19
SHMT2-201ENST00000328923 NFE2L2Q16236 605 aa13.84□□□□□ -0.19
SHMT2-201ENST00000328923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.84□□□□□ -0.19
SHMT2-201ENST00000328923 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-201ENST00000328923 ATP8B1O43520 1251 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 SKILP12757 684 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 ANAPC15P60006 121 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 CCAR2Q8N163 923 aaKnown RBP13.83□□□□□ -0.2
SHMT2-201ENST00000328923 UBXN4Q92575 508 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 EPC1Q9H2F5 836 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 ELP1O95163 1332 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 RTL1A6NKG5 1358 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 RPAP1Q9BWH6 1393 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-201ENST00000328923 FIBPO43427 364 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 HNRNPH1P31943 449 aaKnown RBP13.83□□□□□ -0.2
SHMT2-201ENST00000328923 KCNV1Q6PIU1 500 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 CPLX2Q6PUV4 134 aaKnown RBP13.83□□□□□ -0.2
SHMT2-201ENST00000328923 OTUD6BQ8N6M0 293 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 MRVI1Q9Y6F6 885 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 CCDC61Q9Y6R9 512 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 EDC4Q6P2E9 1401 aaKnown RBP13.83□□□□□ -0.2
SHMT2-201ENST00000328923 PTPRUQ92729 1446 aa13.83□□□□□ -0.2
SHMT2-201ENST00000328923 CC2D1AQ6P1N0 951 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-201ENST00000328923 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-201ENST00000328923 OSBPL3Q9H4L5 887 aa13.82□□□□□ -0.2
SHMT2-201ENST00000328923 TBX22Q9Y458 520 aa13.82□□□□□ -0.2
SHMT2-201ENST00000328923 MON2Q7Z3U7 1717 aa13.82□□□□□ -0.2
SHMT2-201ENST00000328923 XRN1Q8IZH2 1706 aaKnown RBP13.82□□□□□ -0.2
SHMT2-201ENST00000328923 SSH2Q76I76 1423 aa13.82□□□□□ -0.2
SHMT2-201ENST00000328923 RPS6KA5O75582 802 aa13.82□□□□□ -0.2
SHMT2-201ENST00000328923 LIG1P18858 919 aa13.82□□□□□ -0.2
SHMT2-201ENST00000328923 ANKLE2Q86XL3 938 aa13.82□□□□□ -0.2
SHMT2-201ENST00000328923 GIMAP7Q8NHV1 300 aa13.82□□□□□ -0.2
SHMT2-201ENST00000328923 CBX8Q9HC52 389 aa13.82□□□□□ -0.2
SHMT2-201ENST00000328923 AKAP12Q02952 1782 aa13.81□□□□□ -0.2
SHMT2-201ENST00000328923 C21orf2O43822 256 aa13.81□□□□□ -0.2
SHMT2-201ENST00000328923 VPS18Q9P253 973 aa13.81□□□□□ -0.2
SHMT2-201ENST00000328923 WDR33Q9C0J8 1336 aaKnown RBP13.81□□□□□ -0.2
SHMT2-201ENST00000328923 RGS12O14924 1447 aa13.81□□□□□ -0.2
SHMT2-201ENST00000328923 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
SHMT2-201ENST00000328923 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-201ENST00000328923 TSPYL6Q8N831 410 aa13.81□□□□□ -0.2
SHMT2-201ENST00000328923 A0A087WUV0 522 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-201ENST00000328923 PRKAR2BP31323 418 aa13.8□□□□□ -0.2
SHMT2-201ENST00000328923 TWISTNBQ3B726 338 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-201ENST00000328923 JPH2Q9BR39 696 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-201ENST00000328923 PRR36Q9H6K5 1346 aa13.8□□□□□ -0.2
SHMT2-201ENST00000328923 TYRO3Q06418 890 aa13.8□□□□□ -0.2
SHMT2-201ENST00000328923 SNW1Q13573 536 aaKnown RBP13.8□□□□□ -0.2
SHMT2-201ENST00000328923 FBXW10Q5XX13 1052 aa13.8□□□□□ -0.2
SHMT2-201ENST00000328923 LRRC31Q6UY01 552 aa13.8□□□□□ -0.2
SHMT2-201ENST00000328923 GNL3LQ9NVN8 582 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms