RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 CTSWP56202 376 aa21.31■■□□□ 1
CLDN6-201ENST00000328796 GRAPQ13588 217 aa21.31■■□□□ 1
CLDN6-201ENST00000328796 CCDC152Q4G0S7 254 aa21.31■■□□□ 1
CLDN6-201ENST00000328796 GRAPLQ8TC17 118 aaPredicted RBP21.31■■□□□ 1
CLDN6-201ENST00000328796 SNED1Q8TER0 1413 aa21.31■■□□□ 1
CLDN6-201ENST00000328796 PPEF1O14829 653 aaPredicted RBP21.3■■□□□ 1
CLDN6-201ENST00000328796 BBOX1O75936 387 aa21.3■■□□□ 1
CLDN6-201ENST00000328796 CCDC93Q567U6 631 aa21.3■■□□□ 1
CLDN6-201ENST00000328796 TTLL11Q8NHH1 800 aa21.3■■□□□ 1
CLDN6-201ENST00000328796 C9orf78Q9NZ63 289 aaPredicted RBP21.3■■□□□ 1
CLDN6-201ENST00000328796 UTYO14607 1347 aa21.3■■□□□ 1
CLDN6-201ENST00000328796 COL4A1P02462 1669 aa21.3■■□□□ 1
CLDN6-201ENST00000328796 CCDC88AQ3V6T2 1871 aa21.29■■□□□ 1
CLDN6-201ENST00000328796 CCT4P50991 539 aaKnown RBP21.29■■□□□ 1
CLDN6-201ENST00000328796 CC2D2BQ6DHV5 1058 aa21.29■■□□□ 1
CLDN6-201ENST00000328796 OLFM4Q6UX06 510 aa21.29■■□□□ 1
CLDN6-201ENST00000328796 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
CLDN6-201ENST00000328796 LTBP3Q9NS15 1303 aa21.29■■□□□ 1
CLDN6-201ENST00000328796 RTL9Q8NET4 1388 aa21.29■■□□□ 1
CLDN6-201ENST00000328796 TRIM27P14373 513 aa21.28■■□□□ 1
CLDN6-201ENST00000328796 ATF7IPQ6VMQ6 1270 aa21.28■■□□□ 1
CLDN6-201ENST00000328796 FRAT1Q92837 279 aaPredicted RBP21.28■■□□□ 1
CLDN6-201ENST00000328796 CSF1RP07333 972 aa21.27■■□□□ 1
CLDN6-201ENST00000328796 RASSF7Q02833 373 aa21.27■■□□□ 1
CLDN6-201ENST00000328796 TMC4Q7Z404 712 aa21.27■■□□□ 1
CLDN6-201ENST00000328796 CELF1Q92879 486 aaKnown RBP21.27■■□□□ 1
CLDN6-201ENST00000328796 SEC31BQ9NQW1 1179 aa21.27■■□□□ 1
CLDN6-201ENST00000328796 ATP6V0A2Q9Y487 856 aa21.27■■□□□ 1
CLDN6-201ENST00000328796 LRRC37AA6NMS7 1700 aa21.27■■□□□ 1
CLDN6-201ENST00000328796 NBPF7P0C2Y1 421 aaPredicted RBP21.26■□□□□ 0.99
CLDN6-201ENST00000328796 FOXO4P98177 505 aa21.26■□□□□ 0.99
CLDN6-201ENST00000328796 ZKSCAN2Q63HK3 967 aa21.26■□□□□ 0.99
CLDN6-201ENST00000328796 INTS3Q68E01 1043 aaKnown RBP21.26■□□□□ 0.99
CLDN6-201ENST00000328796 SLC51AQ86UW1 340 aa21.26■□□□□ 0.99
CLDN6-201ENST00000328796 RTKN2Q8IZC4 609 aa21.26■□□□□ 0.99
CLDN6-201ENST00000328796 USP44Q9H0E7 712 aa21.26■□□□□ 0.99
CLDN6-201ENST00000328796 YY1P25490 414 aa21.25■□□□□ 0.99
CLDN6-201ENST00000328796 PRELPP51888 382 aa21.25■□□□□ 0.99
CLDN6-201ENST00000328796 RPS8P62241 208 aaKnown RBP21.25■□□□□ 0.99
CLDN6-201ENST00000328796 GRIPAP1Q4V328 841 aa21.25■□□□□ 0.99
CLDN6-201ENST00000328796 SP8Q8IXZ3 490 aa21.25■□□□□ 0.99
CLDN6-201ENST00000328796 CCDC85AQ96PX6 553 aaPredicted RBP21.25■□□□□ 0.99
CLDN6-201ENST00000328796 TAOK3Q9H2K8 898 aa21.25■□□□□ 0.99
CLDN6-201ENST00000328796 GREM2Q9H772 168 aa21.25■□□□□ 0.99
CLDN6-201ENST00000328796 TNNQ9UQP3 1299 aa21.25■□□□□ 0.99
CLDN6-201ENST00000328796 DICER1Q9UPY3 1922 aaKnown RBP21.25■□□□□ 0.99
CLDN6-201ENST00000328796 EPHA10Q5JZY3 1008 aa21.24■□□□□ 0.99
CLDN6-201ENST00000328796 KAZALD1Q96I82 304 aa21.24■□□□□ 0.99
CLDN6-201ENST00000328796 LMNB1P20700 586 aa21.23■□□□□ 0.99
CLDN6-201ENST00000328796 FKBP4Q02790 459 aaKnown RBP eCLIP21.23■□□□□ 0.99
CLDN6-201ENST00000328796 C9orf131Q5VYM1 1079 aa21.23■□□□□ 0.99
CLDN6-201ENST00000328796 SUCLG2Q96I99 432 aa21.23■□□□□ 0.99
CLDN6-201ENST00000328796 RCAN3Q9UKA8 241 aa21.23■□□□□ 0.99
CLDN6-201ENST00000328796 CDC5LQ99459 802 aaKnown RBP21.23■□□□□ 0.99
CLDN6-201ENST00000328796 PSMD1Q99460 953 aa21.23■□□□□ 0.99
CLDN6-201ENST00000328796 FAM161AQ3B820 660 aa21.22■□□□□ 0.99
CLDN6-201ENST00000328796 CLUAP1Q96AJ1 413 aa21.22■□□□□ 0.99
CLDN6-201ENST00000328796 TMX4Q9H1E5 349 aaPredicted RBP21.22■□□□□ 0.99
CLDN6-201ENST00000328796 RNF181Q9P0P0 153 aa21.22■□□□□ 0.99
CLDN6-201ENST00000328796 SPEF2Q9C093 1822 aa21.21■□□□□ 0.99
CLDN6-201ENST00000328796 ITGA6P23229 1130 aa21.21■□□□□ 0.99
CLDN6-201ENST00000328796 LMBR1LQ6UX01 489 aa21.21■□□□□ 0.99
CLDN6-201ENST00000328796 ANKRD18AQ8IVF6 992 aa21.21■□□□□ 0.99
CLDN6-201ENST00000328796 RABL6Q3YEC7 729 aaPredicted RBP21.2■□□□□ 0.98
CLDN6-201ENST00000328796 LTBP1Q14766 1721 aa21.19■□□□□ 0.98
CLDN6-201ENST00000328796 ANKRD44Q8N8A2 993 aa21.19■□□□□ 0.98
CLDN6-201ENST00000328796 RTFDC1Q9BY42 306 aaPredicted RBP21.19■□□□□ 0.98
CLDN6-201ENST00000328796 BICC1Q9H694 974 aaKnown RBP21.19■□□□□ 0.98
CLDN6-201ENST00000328796 TIAM2Q8IVF5 1701 aa21.19■□□□□ 0.98
CLDN6-201ENST00000328796 DZIP1LQ8IYY4 767 aaKnown RBP21.18■□□□□ 0.98
CLDN6-201ENST00000328796 MPNDQ8N594 471 aa21.18■□□□□ 0.98
CLDN6-201ENST00000328796 TMEM57Q8N5G2 664 aa21.18■□□□□ 0.98
CLDN6-201ENST00000328796 BSDC1Q9NW68 430 aaPredicted RBP21.18■□□□□ 0.98
CLDN6-201ENST00000328796 DUOX1Q9NRD9 1551 aa21.18■□□□□ 0.98
CLDN6-201ENST00000328796 ZC3H4Q9UPT8 1303 aaKnown RBP21.17■□□□□ 0.98
CLDN6-201ENST00000328796 ANKRD18BA2A2Z9 1011 aa21.17■□□□□ 0.98
CLDN6-201ENST00000328796 UBTFL1P0CB47 393 aaPredicted RBP21.17■□□□□ 0.98
CLDN6-201ENST00000328796 DPP8Q6V1X1 898 aaPredicted RBP21.17■□□□□ 0.98
CLDN6-201ENST00000328796 MEIS3Q99687 375 aa21.17■□□□□ 0.98
CLDN6-201ENST00000328796 ZNF277Q9NRM2 450 aaPredicted RBP21.17■□□□□ 0.98
CLDN6-201ENST00000328796 RLBP1P12271 317 aa21.16■□□□□ 0.98
CLDN6-201ENST00000328796 IARSP41252 1262 aaKnown RBP21.16■□□□□ 0.98
CLDN6-201ENST00000328796 IFIT5Q13325 482 aaKnown RBP21.16■□□□□ 0.98
CLDN6-201ENST00000328796 FTSJ3Q8IY81 847 aaKnown RBP21.16■□□□□ 0.98
CLDN6-201ENST00000328796 CHMP3Q9Y3E7 222 aa21.16■□□□□ 0.98
CLDN6-201ENST00000328796 GNAI3P08754 354 aa21.15■□□□□ 0.98
CLDN6-201ENST00000328796 IGHMBP2P38935 993 aaKnown RBP21.15■□□□□ 0.98
CLDN6-201ENST00000328796 GPSM2P81274 684 aa21.15■□□□□ 0.98
CLDN6-201ENST00000328796 SUPT20HQ8NEM7 779 aa21.15■□□□□ 0.98
CLDN6-201ENST00000328796 PODXL2Q9NZ53 605 aa21.15■□□□□ 0.98
CLDN6-201ENST00000328796 HDAC5Q9UQL6 1122 aa21.15■□□□□ 0.98
CLDN6-201ENST00000328796 CCDC57Q2TAC2 916 aa21.14■□□□□ 0.98
CLDN6-201ENST00000328796 VPS33BQ9H267 617 aa21.14■□□□□ 0.98
CLDN6-201ENST00000328796 NSFL1CQ9UNZ2 370 aaKnown RBP21.14■□□□□ 0.98
CLDN6-201ENST00000328796 MS4A1P11836 297 aa21.13■□□□□ 0.97
CLDN6-201ENST00000328796 MINPP1Q9UNW1 487 aa21.13■□□□□ 0.97
CLDN6-201ENST00000328796 COL4A5P29400 1685 aa21.13■□□□□ 0.97
CLDN6-201ENST00000328796 ZNF784Q8NCA9 323 aaPredicted RBP21.12■□□□□ 0.97
CLDN6-201ENST00000328796 MPHOSPH8Q99549 860 aa21.12■□□□□ 0.97
CLDN6-201ENST00000328796 POLLQ9UGP5 575 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms