RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 TPM3P06753 285 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 CCT2P78371 535 aaKnown RBP11.24□□□□□ -0.61
DDX53-201ENST00000327968 AACSQ86V21 672 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 KIF18AQ8NI77 898 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 FEZ1Q99689 392 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 FSD1Q9BTV5 496 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 C9orf78Q9NZ63 289 aaPredicted RBP11.24□□□□□ -0.61
DDX53-201ENST00000327968 TAF6LQ9Y6J9 622 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 RGS12O14924 1447 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 CAMTA1Q9Y6Y1 1673 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 IRX5P78411 483 aaPredicted RBP11.24□□□□□ -0.61
DDX53-201ENST00000327968 CCDC34Q96HJ3 373 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 HYPKQ9NX55 129 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 PTPRCP08575 1304 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 SOS1Q07889 1333 aaPredicted RBP11.24□□□□□ -0.61
DDX53-201ENST00000327968 CCDC66A2RUB6 948 aa11.24□□□□□ -0.61
DDX53-201ENST00000327968 C11orf57Q6ZUT1 292 aaPredicted RBP11.24□□□□□ -0.61
DDX53-201ENST00000327968 RBM8AQ9Y5S9 174 aaKnown RBP11.24□□□□□ -0.61
DDX53-201ENST00000327968 ME1P48163 572 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 GYS2P54840 703 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 GOLGA8FQ08AF8 430 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 GOLGA8DPQ0D2H9 430 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 LRRN4CLQ8ND94 238 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 KLHDC4Q8TBB5 520 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 TIGD1Q96MW7 591 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 SLFN14P0C7P3 912 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 BLOC1S2Q6QNY1 142 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 CHST3Q7LGC8 479 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 CLASRPQ8N2M8 674 aaKnown RBP11.23□□□□□ -0.61
DDX53-201ENST00000327968 AOPEPQ8N6M6 819 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 NOL10Q9BSC4 688 aaKnown RBP11.23□□□□□ -0.61
DDX53-201ENST00000327968 ZCCHC17Q9NP64 241 aaKnown RBP11.23□□□□□ -0.61
DDX53-201ENST00000327968 RAD50Q92878 1312 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 CHGBP05060 677 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 CCDC30Q5VVM6 783 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 LSG1Q9H089 658 aaKnown RBP11.23□□□□□ -0.61
DDX53-201ENST00000327968 USP44Q9H0E7 712 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 C19orf44Q9H6X5 657 aa11.23□□□□□ -0.61
DDX53-201ENST00000327968 TERF2Q15554 542 aa11.22□□□□□ -0.61
DDX53-201ENST00000327968 DDX41Q9UJV9 622 aaKnown RBP11.22□□□□□ -0.61
DDX53-201ENST00000327968 PI4KAP2A4QPH2 592 aa11.22□□□□□ -0.61
DDX53-201ENST00000327968 SEC31AO94979 1220 aaKnown RBP11.22□□□□□ -0.61
DDX53-201ENST00000327968 SF3A1Q15459 793 aaKnown RBP11.22□□□□□ -0.61
DDX53-201ENST00000327968 TMC6Q7Z403 805 aa11.22□□□□□ -0.61
DDX53-201ENST00000327968 PI4KAP1Q8N8J0 262 aa11.22□□□□□ -0.61
DDX53-201ENST00000327968 URI1O94763 535 aaPredicted RBP11.22□□□□□ -0.61
DDX53-201ENST00000327968 ARHGAP29Q52LW3 1261 aa11.22□□□□□ -0.61
DDX53-201ENST00000327968 BRF1Q92994 677 aa11.22□□□□□ -0.61
DDX53-201ENST00000327968 FUCA2Q9BTY2 467 aa11.22□□□□□ -0.61
DDX53-201ENST00000327968 OSBPL3Q9H4L5 887 aa11.22□□□□□ -0.61
DDX53-201ENST00000327968 MNS1Q8NEH6 495 aa11.21□□□□□ -0.61
DDX53-201ENST00000327968 RUFY2Q8WXA3 655 aa11.21□□□□□ -0.61
DDX53-201ENST00000327968 SBNO1A3KN83 1393 aa11.21□□□□□ -0.61
DDX53-201ENST00000327968 NHSL1Q5SYE7 1610 aa11.21□□□□□ -0.61
DDX53-201ENST00000327968 LTN1O94822 1766 aa11.21□□□□□ -0.61
DDX53-201ENST00000327968 TEFQ10587 303 aa11.21□□□□□ -0.61
DDX53-201ENST00000327968 ZNF397Q8NF99 534 aaPredicted RBP11.21□□□□□ -0.61
DDX53-201ENST00000327968 LEO1Q8WVC0 666 aaPredicted RBP11.21□□□□□ -0.61
DDX53-201ENST00000327968 DNAJC2Q99543 621 aaKnown RBP11.21□□□□□ -0.61
DDX53-201ENST00000327968 DNAI1Q9UI46 699 aa11.21□□□□□ -0.61
DDX53-201ENST00000327968 PHF8Q9UPP1 1060 aa11.21□□□□□ -0.61
DDX53-201ENST00000327968 TMEM94Q12767 1356 aa11.21□□□□□ -0.62
DDX53-201ENST00000327968 CTIFO43310 598 aaKnown RBP11.21□□□□□ -0.62
DDX53-201ENST00000327968 SNW1Q13573 536 aaKnown RBP11.21□□□□□ -0.62
DDX53-201ENST00000327968 TTLL5Q6EMB2 1281 aa11.21□□□□□ -0.62
DDX53-201ENST00000327968 OTUD7BQ6GQQ9 843 aa11.21□□□□□ -0.62
DDX53-201ENST00000327968 CCDC73Q6ZRK6 1079 aa11.21□□□□□ -0.62
DDX53-201ENST00000327968 CCAR1Q8IX12 1150 aaKnown RBP11.21□□□□□ -0.62
DDX53-201ENST00000327968 PAXBP1Q9Y5B6 917 aa11.21□□□□□ -0.62
DDX53-201ENST00000327968 KINO60870 393 aaKnown RBP11.2□□□□□ -0.62
DDX53-201ENST00000327968 NMIQ13287 307 aaPredicted RBP11.2□□□□□ -0.62
DDX53-201ENST00000327968 CCDC129Q6ZRS4 1044 aa11.2□□□□□ -0.62
DDX53-201ENST00000327968 LRRC8AQ8IWT6 810 aa11.2□□□□□ -0.62
DDX53-201ENST00000327968 TTC14Q96N46 770 aa11.2□□□□□ -0.62
DDX53-201ENST00000327968 CREB3L3Q68CJ9 461 aa11.2□□□□□ -0.62
DDX53-201ENST00000327968 PDILTQ8N807 584 aa11.2□□□□□ -0.62
DDX53-201ENST00000327968 KIF1BPQ96EK5 621 aa11.2□□□□□ -0.62
DDX53-201ENST00000327968 PLEKHG2Q9H7P9 1386 aa11.2□□□□□ -0.62
DDX53-201ENST00000327968 PROSER2Q86WR7 435 aaPredicted RBP11.2□□□□□ -0.62
DDX53-201ENST00000327968 C10orf67Q8IYJ2 551 aa11.2□□□□□ -0.62
DDX53-201ENST00000327968 FAM208AQ9UK61 1670 aaKnown RBP11.19□□□□□ -0.62
DDX53-201ENST00000327968 SLU7O95391 586 aaKnown RBP11.19□□□□□ -0.62
DDX53-201ENST00000327968 LMOD2Q6P5Q4 547 aa11.19□□□□□ -0.62
DDX53-201ENST00000327968 PGBD1Q96JS3 809 aa11.19□□□□□ -0.62
DDX53-201ENST00000327968 PXDNQ92626 1479 aa11.19□□□□□ -0.62
DDX53-201ENST00000327968 POLR3DP05423 398 aaPredicted RBP11.19□□□□□ -0.62
DDX53-201ENST00000327968 LMOD1P29536 600 aaPredicted RBP11.19□□□□□ -0.62
DDX53-201ENST00000327968 CWF19L2Q2TBE0 894 aaKnown RBP11.19□□□□□ -0.62
DDX53-201ENST00000327968 NGDNQ8NEJ9 315 aaKnown RBP11.19□□□□□ -0.62
DDX53-201ENST00000327968 SEC62Q99442 399 aaKnown RBP11.19□□□□□ -0.62
DDX53-201ENST00000327968 A0A1B0GVL5 298 aa11.18□□□□□ -0.62
DDX53-201ENST00000327968 ANKRD65E5RJM6 399 aa11.18□□□□□ -0.62
DDX53-201ENST00000327968 HNRNPH2P55795 449 aaKnown RBP11.18□□□□□ -0.62
DDX53-201ENST00000327968 TEX35Q5T0J7 233 aa11.18□□□□□ -0.62
DDX53-201ENST00000327968 CREBRFQ8IUR6 639 aa11.18□□□□□ -0.62
DDX53-201ENST00000327968 PI4K2BQ8TCG2 481 aa11.18□□□□□ -0.62
DDX53-201ENST00000327968 UBXN4Q92575 508 aa11.18□□□□□ -0.62
DDX53-201ENST00000327968 SCAND2PQ9GZW5 306 aaPredicted RBP11.18□□□□□ -0.62
DDX53-201ENST00000327968 NCOA5Q9HCD5 579 aaKnown RBP11.18□□□□□ -0.62
DDX53-201ENST00000327968 MAP3K19Q56UN5 1328 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms