RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 MSL1Q68DK7 614 aa7.22□□□□□ -1.25
SSH1-202ENST00000326495 NUP133Q8WUM0 1156 aa7.22□□□□□ -1.25
SSH1-202ENST00000326495 EVI5LQ96CN4 794 aa7.22□□□□□ -1.25
SSH1-202ENST00000326495 PPIP5K1Q6PFW1 1433 aa7.22□□□□□ -1.25
SSH1-202ENST00000326495 IRX3P78415 501 aaPredicted RBP7.22□□□□□ -1.25
SSH1-202ENST00000326495 PPFIBP2Q8ND30 876 aa7.22□□□□□ -1.25
SSH1-202ENST00000326495 CTNNBL1Q8WYA6 563 aaPredicted RBP7.22□□□□□ -1.25
SSH1-202ENST00000326495 AIDAQ96BJ3 306 aa7.22□□□□□ -1.25
SSH1-202ENST00000326495 BICDL2A1A5D9 508 aa7.21□□□□□ -1.25
SSH1-202ENST00000326495 C11orf95C9JLR9 678 aaPredicted RBP7.21□□□□□ -1.25
SSH1-202ENST00000326495 NOL3O60936 208 aaKnown RBP7.21□□□□□ -1.25
SSH1-202ENST00000326495 SPECC1Q5M775 1068 aa7.21□□□□□ -1.25
SSH1-202ENST00000326495 TICAM2Q86XR7 235 aa7.21□□□□□ -1.25
SSH1-202ENST00000326495 CALML3P27482 149 aa7.21□□□□□ -1.25
SSH1-202ENST00000326495 GOPCQ9HD26 462 aa7.21□□□□□ -1.25
SSH1-202ENST00000326495 ZNF644Q9H582 1327 aaPredicted RBP7.21□□□□□ -1.25
SSH1-202ENST00000326495 IBSPP21815 317 aaPredicted RBP7.21□□□□□ -1.26
SSH1-202ENST00000326495 TMC6Q7Z403 805 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 SMAP1Q8IYB5 467 aaPredicted RBP7.21□□□□□ -1.26
SSH1-202ENST00000326495 TACC1O75410 805 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 CUL5Q93034 780 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 SMC6Q96SB8 1091 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 IQSEC3Q9UPP2 1182 aaPredicted RBP7.21□□□□□ -1.26
SSH1-202ENST00000326495 SSX2IPQ9Y2D8 614 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 MAP3K21Q5TCX8 1036 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 TBC1D5Q92609 795 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 CCDC113Q9H0I3 377 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 SCAF11Q99590 1463 aaKnown RBP7.21□□□□□ -1.26
SSH1-202ENST00000326495 GNAT3A8MTJ3 354 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 EBAG9O00559 213 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 PPFIA1Q13136 1202 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 FAM200AQ8TCP9 573 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 CALML4Q96GE6 196 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 TMOD4Q9NZQ9 345 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 RARSP54136 660 aaKnown RBP7.21□□□□□ -1.26
SSH1-202ENST00000326495 FKBP4Q02790 459 aaKnown RBP eCLIP7.21□□□□□ -1.26
SSH1-202ENST00000326495 MAP3K12Q12852 859 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 NUTM1Q86Y26 1132 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 SEC62Q99442 399 aaKnown RBP7.21□□□□□ -1.26
SSH1-202ENST00000326495 HLTFQ14527 1009 aaKnown RBP eCLIP7.21□□□□□ -1.26
SSH1-202ENST00000326495 UHRF1BP1Q6BDS2 1440 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 ZMYND15Q9H091 742 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 PNMA2Q9UL42 364 aa7.21□□□□□ -1.26
SSH1-202ENST00000326495 KRT86O43790 486 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 VCXQ9H320 206 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 ZKSCAN5Q9Y2L8 839 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 CDK13Q14004 1512 aaKnown RBP7.2□□□□□ -1.26
SSH1-202ENST00000326495 TTC31Q49AM3 519 aaPredicted RBP7.2□□□□□ -1.26
SSH1-202ENST00000326495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.2□□□□□ -1.26
SSH1-202ENST00000326495 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.2□□□□□ -1.26
SSH1-202ENST00000326495 CNTRLQ7Z7A1 2325 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 BTBD11A6QL63 1104 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 HDAC1Q13547 482 aaPredicted RBP7.2□□□□□ -1.26
SSH1-202ENST00000326495 RNF168Q8IYW5 571 aaPredicted RBP7.2□□□□□ -1.26
SSH1-202ENST00000326495 NUCKS1Q9H1E3 243 aaKnown RBP7.2□□□□□ -1.26
SSH1-202ENST00000326495 FAM184BQ9ULE4 1060 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 KIAA0586Q9BVV6 1533 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 LDHCP07864 332 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 ARHGAP25P42331 645 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 CATIPQ7Z7H3 387 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 FSIP1Q8NA03 581 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 OGFRQ9NZT2 677 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 GOLGA8QA0A0J9YX86 632 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 GOLGA8OA6NCC3 632 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 GOLGA8NF8WBI6 632 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 PDE6BP35913 854 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 AFAP1L2Q8N4X5 818 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.2□□□□□ -1.26
SSH1-202ENST00000326495 CDK19Q9BWU1 502 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 SLC12A7Q9Y666 1083 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 SULT6B1Q6IMI4 303 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 TSKSQ9UJT2 592 aa7.2□□□□□ -1.26
SSH1-202ENST00000326495 GOLGA6CA6NDK9 693 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 GOLGA6BA6NDN3 693 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 GOLGA6DP0CG33 693 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 ZBTB17Q13105 803 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 CCDC102BQ68D86 513 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 GPATCH11Q8N954 259 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 GOLGA6AQ9NYA3 693 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 CPSF2Q9P2I0 782 aaKnown RBP7.19□□□□□ -1.26
SSH1-202ENST00000326495 IGHMBP2P38935 993 aaKnown RBP7.19□□□□□ -1.26
SSH1-202ENST00000326495 SSRP1Q08945 709 aaKnown RBP7.19□□□□□ -1.26
SSH1-202ENST00000326495 RSRC1Q96IZ7 334 aaKnown RBP7.19□□□□□ -1.26
SSH1-202ENST00000326495 RAB3IPQ96QF0 476 aaPredicted RBP7.19□□□□□ -1.26
SSH1-202ENST00000326495 ZFYVE9O95405 1425 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 GIGYF1O75420 1035 aaPredicted RBP7.19□□□□□ -1.26
SSH1-202ENST00000326495 VWA3BQ502W6 1294 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 VCX3BQ9H321 246 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 PRDM10Q9NQV6 1147 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 ANAPC4Q9UJX5 808 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 PLXNC1O60486 1568 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 IQCGQ9H095 443 aaKnown RBP7.19□□□□□ -1.26
SSH1-202ENST00000326495 KIAA0753Q2KHM9 967 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 CFAP58Q5T655 872 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 MCTP2Q6DN12 878 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 CCDC121Q6ZUS5 278 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 HDXQ7Z353 690 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 NUMA1Q14980 2115 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 VAV2P52735 878 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 GNG11P61952 73 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms