RNA–Protein interactions for RNA: ENST00000324849.8

VPS37A-201, Transcript of VPS37A, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37A, Length 4,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-201ENST00000324849 PTPN14Q15678 1187 aa20.14■□□□□ 0.81
VPS37A-201ENST00000324849 TBC1D9Q6ZT07 1266 aa20.14■□□□□ 0.81
VPS37A-201ENST00000324849 USP37Q86T82 979 aa20.14■□□□□ 0.81
VPS37A-201ENST00000324849 MAP3K1Q13233 1512 aa20.14■□□□□ 0.81
VPS37A-201ENST00000324849 SLC9C2Q5TAH2 1124 aa20.14■□□□□ 0.81
VPS37A-201ENST00000324849 CTNNBL1Q8WYA6 563 aaPredicted RBP20.14■□□□□ 0.81
VPS37A-201ENST00000324849 BRF1Q92994 677 aa20.14■□□□□ 0.81
VPS37A-201ENST00000324849 PANK2Q9BZ23 570 aa20.14■□□□□ 0.81
VPS37A-201ENST00000324849 RIMS2Q9UQ26 1411 aa20.14■□□□□ 0.81
VPS37A-201ENST00000324849 ZNF608Q9ULD9 1512 aaPredicted RBP20.14■□□□□ 0.81
VPS37A-201ENST00000324849 PPIP5K1Q6PFW1 1433 aa20.13■□□□□ 0.81
VPS37A-201ENST00000324849 CCDC102AQ96A19 550 aa20.13■□□□□ 0.81
VPS37A-201ENST00000324849 DCAF5Q96JK2 942 aa20.13■□□□□ 0.81
VPS37A-201ENST00000324849 MEIS3Q99687 375 aa20.13■□□□□ 0.81
VPS37A-201ENST00000324849 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.13■□□□□ 0.81
VPS37A-201ENST00000324849 PLCH2O75038 1416 aa20.13■□□□□ 0.81
VPS37A-201ENST00000324849 GCP02774 474 aa20.13■□□□□ 0.81
VPS37A-201ENST00000324849 TTC22Q5TAA0 569 aa20.13■□□□□ 0.81
VPS37A-201ENST00000324849 LARP6Q9BRS8 491 aaKnown RBP20.13■□□□□ 0.81
VPS37A-201ENST00000324849 A2MP01023 1474 aa20.13■□□□□ 0.81
VPS37A-201ENST00000324849 HSPA2P54652 639 aa20.13■□□□□ 0.81
VPS37A-201ENST00000324849 NFATC2IPQ8NCF5 419 aa20.13■□□□□ 0.81
VPS37A-201ENST00000324849 ASXL2Q76L83 1435 aa20.12■□□□□ 0.81
VPS37A-201ENST00000324849 FLT4P35916 1363 aa20.12■□□□□ 0.81
VPS37A-201ENST00000324849 EIF4A2Q14240 407 aaKnown RBP20.12■□□□□ 0.81
VPS37A-201ENST00000324849 CCDC91Q7Z6B0 441 aa20.12■□□□□ 0.81
VPS37A-201ENST00000324849 ZSCAN16Q9H4T2 348 aaPredicted RBP20.12■□□□□ 0.81
VPS37A-201ENST00000324849 PRC1O43663 620 aa20.12■□□□□ 0.81
VPS37A-201ENST00000324849 BICD1Q96G01 975 aa20.12■□□□□ 0.81
VPS37A-201ENST00000324849 GRM1Q13255 1194 aa20.12■□□□□ 0.81
VPS37A-201ENST00000324849 PICALMQ13492 652 aa20.12■□□□□ 0.81
VPS37A-201ENST00000324849 CPLX3Q8WVH0 158 aa20.12■□□□□ 0.81
VPS37A-201ENST00000324849 VEZTQ9HBM0 779 aa20.12■□□□□ 0.81
VPS37A-201ENST00000324849 RBM27Q9P2N5 1060 aaKnown RBP20.11■□□□□ 0.81
VPS37A-201ENST00000324849 RTN1Q16799 776 aa20.11■□□□□ 0.81
VPS37A-201ENST00000324849 RAB11FIP4Q86YS3 637 aa20.11■□□□□ 0.81
VPS37A-201ENST00000324849 DISP3Q9P2K9 1392 aa20.11■□□□□ 0.81
VPS37A-201ENST00000324849 MCMDC2Q4G0Z9 681 aa20.11■□□□□ 0.81
VPS37A-201ENST00000324849 TSHZ3Q63HK5 1081 aa20.1■□□□□ 0.81
VPS37A-201ENST00000324849 KIF18AQ8NI77 898 aa20.1■□□□□ 0.81
VPS37A-201ENST00000324849 VTI1AQ96AJ9 217 aa20.1■□□□□ 0.81
VPS37A-201ENST00000324849 ESPNB1AK53 854 aa20.1■□□□□ 0.81
VPS37A-201ENST00000324849 FERMT1Q9BQL6 677 aa20.1■□□□□ 0.81
VPS37A-201ENST00000324849 ANKRD2Q9GZV1 360 aa20.1■□□□□ 0.81
VPS37A-201ENST00000324849 WDR7Q9Y4E6 1490 aa20.1■□□□□ 0.81
VPS37A-201ENST00000324849 MAP9Q49MG5 647 aa20.1■□□□□ 0.81
VPS37A-201ENST00000324849 BRPF3Q9ULD4 1205 aa20.1■□□□□ 0.81
VPS37A-201ENST00000324849 RALGAPBQ86X10 1494 aa20.1■□□□□ 0.81
VPS37A-201ENST00000324849 BIN1O00499 593 aa20.09■□□□□ 0.81
VPS37A-201ENST00000324849 CAVIN2O95810 425 aa20.09■□□□□ 0.81
VPS37A-201ENST00000324849 ATP8B2P98198 1209 aa20.09■□□□□ 0.81
VPS37A-201ENST00000324849 PUS7Q96PZ0 661 aaKnown RBP20.09■□□□□ 0.81
VPS37A-201ENST00000324849 CDCA7Q9BWT1 371 aaPredicted RBP20.09■□□□□ 0.81
VPS37A-201ENST00000324849 RMND1Q9NWS8 449 aa20.09■□□□□ 0.81
VPS37A-201ENST00000324849 IRS4O14654 1257 aaPredicted RBP20.09■□□□□ 0.81
VPS37A-201ENST00000324849 CCDC172P0C7W6 258 aa20.09■□□□□ 0.81
VPS37A-201ENST00000324849 GNAT2P19087 354 aa20.09■□□□□ 0.81
VPS37A-201ENST00000324849 SMARCC2Q8TAQ2 1214 aa20.09■□□□□ 0.81
VPS37A-201ENST00000324849 CLIP2Q9UDT6 1046 aa20.09■□□□□ 0.81
VPS37A-201ENST00000324849 PUF60Q9UHX1 559 aaKnown RBP20.09■□□□□ 0.81
VPS37A-201ENST00000324849 ANKRD44Q8N8A2 993 aa20.09■□□□□ 0.81
VPS37A-201ENST00000324849 DYDC1Q8WWB3 177 aa20.09■□□□□ 0.81
VPS37A-201ENST00000324849 TAOK3Q9H2K8 898 aa20.09■□□□□ 0.81
VPS37A-201ENST00000324849 C6orf50Q9HD87 102 aa20.08■□□□□ 0.81
VPS37A-201ENST00000324849 URI1O94763 535 aaPredicted RBP20.08■□□□□ 0.81
VPS37A-201ENST00000324849 GPATCH8Q9UKJ3 1502 aaKnown RBP20.08■□□□□ 0.8
VPS37A-201ENST00000324849 MCM3P25205 808 aa20.08■□□□□ 0.8
VPS37A-201ENST00000324849 STX1AQ16623 288 aa20.08■□□□□ 0.8
VPS37A-201ENST00000324849 EXOC1Q9NV70 894 aa20.08■□□□□ 0.8
VPS37A-201ENST00000324849 NEMFO60524 1076 aa20.08■□□□□ 0.8
VPS37A-201ENST00000324849 DNA2P51530 1060 aa20.08■□□□□ 0.8
VPS37A-201ENST00000324849 ALS2CR12Q96Q35 445 aa20.08■□□□□ 0.8
VPS37A-201ENST00000324849 SSFA2P28290 1259 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 C16orf71Q8IYS4 520 aaPredicted RBP20.07■□□□□ 0.8
VPS37A-201ENST00000324849 ALG1Q9BT22 464 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 POLKQ9UBT6 870 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
VPS37A-201ENST00000324849 MAGEB6P1A0A0J9YX57 407 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 TMCO5BA8MYB1 307 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 GSDMDP57764 484 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 MTHFSDQ2M296 383 aaKnown RBP20.07■□□□□ 0.8
VPS37A-201ENST00000324849 RBM26Q5T8P6 1007 aaKnown RBP20.07■□□□□ 0.8
VPS37A-201ENST00000324849 CCDC113Q9H0I3 377 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 TBX22Q9Y458 520 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 KAT6BQ8WYB5 2073 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 ZNF518AQ6AHZ1 1483 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 LMTK3Q96Q04 1460 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 ACTN2P35609 894 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 HDAC1Q13547 482 aaPredicted RBP20.07■□□□□ 0.8
VPS37A-201ENST00000324849 HEATR3Q7Z4Q2 680 aa20.07■□□□□ 0.8
VPS37A-201ENST00000324849 PDE1AP54750 535 aa20.06■□□□□ 0.8
VPS37A-201ENST00000324849 TMCO3Q6UWJ1 677 aa20.06■□□□□ 0.8
VPS37A-201ENST00000324849 ZSCAN30Q86W11 494 aa20.06■□□□□ 0.8
VPS37A-201ENST00000324849 TRIM47Q96LD4 638 aa20.06■□□□□ 0.8
VPS37A-201ENST00000324849 CALM1P0DP23 149 aa20.06■□□□□ 0.8
VPS37A-201ENST00000324849 CALM2P0DP24 149 aa20.06■□□□□ 0.8
VPS37A-201ENST00000324849 CALM3P0DP25 149 aa20.06■□□□□ 0.8
VPS37A-201ENST00000324849 TRAPPC3LQ5T215 181 aa20.06■□□□□ 0.8
VPS37A-201ENST00000324849 NAA15Q9BXJ9 866 aaKnown RBP20.06■□□□□ 0.8
VPS37A-201ENST00000324849 NAPAP54920 295 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms