RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 NFATC2IPQ8NCF5 419 aa14.28□□□□□ -0.12
NLRC3-201ENST00000324659 SUCLG2Q96I99 432 aa14.28□□□□□ -0.12
NLRC3-201ENST00000324659 SPATA32Q96LK8 384 aa14.28□□□□□ -0.12
NLRC3-201ENST00000324659 LRRC2Q9BYS8 371 aa14.28□□□□□ -0.12
NLRC3-201ENST00000324659 PTCD1O75127 700 aaKnown RBP14.28□□□□□ -0.12
NLRC3-201ENST00000324659 CCDC186Q7Z3E2 898 aa14.28□□□□□ -0.12
NLRC3-201ENST00000324659 FBXW7Q969H0 707 aa14.28□□□□□ -0.12
NLRC3-201ENST00000324659 C16orf45Q96MC5 204 aaPredicted RBP14.28□□□□□ -0.12
NLRC3-201ENST00000324659 TRIM5Q9C035 493 aa14.28□□□□□ -0.12
NLRC3-201ENST00000324659 TOPAZ1Q8N9V7 1692 aa14.27□□□□□ -0.12
NLRC3-201ENST00000324659 EPB41L2O43491 1005 aaKnown RBP14.27□□□□□ -0.12
NLRC3-201ENST00000324659 HSP90B1P14625 803 aaKnown RBP14.27□□□□□ -0.12
NLRC3-201ENST00000324659 ZNF589Q86UQ0 364 aaPredicted RBP14.27□□□□□ -0.12
NLRC3-201ENST00000324659 JAK2O60674 1132 aa14.27□□□□□ -0.13
NLRC3-201ENST00000324659 KIAA1524Q8TCG1 905 aa14.27□□□□□ -0.13
NLRC3-201ENST00000324659 DBF4Q9UBU7 674 aaPredicted RBP14.27□□□□□ -0.13
NLRC3-201ENST00000324659 GOLGA6L6A8MZA4 724 aa14.27□□□□□ -0.13
NLRC3-201ENST00000324659 SASH1O94885 1247 aa14.27□□□□□ -0.13
NLRC3-201ENST00000324659 TATP17735 454 aaPredicted RBP14.27□□□□□ -0.13
NLRC3-201ENST00000324659 FAM200AQ8TCP9 573 aa14.27□□□□□ -0.13
NLRC3-201ENST00000324659 MRVI1Q9Y6F6 885 aa14.27□□□□□ -0.13
NLRC3-201ENST00000324659 PXDNLA1KZ92 1463 aa14.26□□□□□ -0.13
NLRC3-201ENST00000324659 PIK3C2AO00443 1686 aa14.26□□□□□ -0.13
NLRC3-201ENST00000324659 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
NLRC3-201ENST00000324659 A0A087WWV3 80 aa14.26□□□□□ -0.13
NLRC3-201ENST00000324659 ATP5J2-PTCD1G3V325 749 aa14.26□□□□□ -0.13
NLRC3-201ENST00000324659 DNAJC25Q9H1X3 360 aa14.25□□□□□ -0.13
NLRC3-201ENST00000324659 CCDC129Q6ZRS4 1044 aa14.25□□□□□ -0.13
NLRC3-201ENST00000324659 CBX8Q9HC52 389 aa14.25□□□□□ -0.13
NLRC3-201ENST00000324659 RNMTO43148 476 aaKnown RBP14.25□□□□□ -0.13
NLRC3-201ENST00000324659 NR1I2O75469 434 aa14.25□□□□□ -0.13
NLRC3-201ENST00000324659 PSMA5P28066 241 aa14.25□□□□□ -0.13
NLRC3-201ENST00000324659 NEXNQ0ZGT2 675 aa14.25□□□□□ -0.13
NLRC3-201ENST00000324659 DNAJC2Q99543 621 aaKnown RBP14.25□□□□□ -0.13
NLRC3-201ENST00000324659 SPTLC3Q9NUV7 552 aa14.25□□□□□ -0.13
NLRC3-201ENST00000324659 AKAP4Q5JQC9 854 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 TOM1L2Q6ZVM7 507 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 ZNF592Q92610 1267 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 MAP4K1Q92918 833 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 CCDC85AQ96PX6 553 aaPredicted RBP14.24□□□□□ -0.13
NLRC3-201ENST00000324659 PRDM11Q9NQV5 511 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 UBR1Q8IWV7 1749 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 GRM8O00222 908 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 EVA1CP58658 441 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 KSR2Q6VAB6 950 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 ERC1Q8IUD2 1116 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 DIP2AQ14689 1571 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 H3BQV1 296 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 IFFO2Q5TF58 517 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 RNF20Q5VTR2 975 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 TM6SF1Q9BZW5 370 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 BABAM1Q9NWV8 329 aa14.24□□□□□ -0.13
NLRC3-201ENST00000324659 NWD1Q149M9 1564 aa14.23□□□□□ -0.13
NLRC3-201ENST00000324659 SEC62Q99442 399 aaKnown RBP14.23□□□□□ -0.13
NLRC3-201ENST00000324659 MYD88Q99836 296 aa14.23□□□□□ -0.13
NLRC3-201ENST00000324659 CACNA1FO60840 1977 aa14.23□□□□□ -0.13
NLRC3-201ENST00000324659 DDX58O95786 925 aaKnown RBP14.23□□□□□ -0.13
NLRC3-201ENST00000324659 LEO1Q8WVC0 666 aaPredicted RBP14.23□□□□□ -0.13
NLRC3-201ENST00000324659 SYTL4Q96C24 671 aaPredicted RBP14.23□□□□□ -0.13
NLRC3-201ENST00000324659 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
NLRC3-201ENST00000324659 USP42Q9H9J4 1324 aaKnown RBP14.22□□□□□ -0.13
NLRC3-201ENST00000324659 PDCP20941 246 aa14.22□□□□□ -0.13
NLRC3-201ENST00000324659 RPS6KB1P23443 525 aa14.22□□□□□ -0.13
NLRC3-201ENST00000324659 TOB2Q14106 344 aaPredicted RBP14.22□□□□□ -0.13
NLRC3-201ENST00000324659 AMOTQ4VCS5 1084 aa14.22□□□□□ -0.13
NLRC3-201ENST00000324659 KAZALD1Q96I82 304 aa14.22□□□□□ -0.13
NLRC3-201ENST00000324659 FTOQ9C0B1 505 aaKnown RBP eCLIP14.22□□□□□ -0.13
NLRC3-201ENST00000324659 C19orf44Q9H6X5 657 aa14.22□□□□□ -0.13
NLRC3-201ENST00000324659 CEMIPQ8WUJ3 1361 aa14.22□□□□□ -0.13
NLRC3-201ENST00000324659 GIGYF1O75420 1035 aaPredicted RBP14.22□□□□□ -0.13
NLRC3-201ENST00000324659 CABP4P57796 275 aa14.22□□□□□ -0.13
NLRC3-201ENST00000324659 NAA30Q147X3 362 aaPredicted RBP14.22□□□□□ -0.13
NLRC3-201ENST00000324659 BRF1Q92994 677 aa14.22□□□□□ -0.13
NLRC3-201ENST00000324659 ZNF165P49910 485 aa14.22□□□□□ -0.13
NLRC3-201ENST00000324659 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
NLRC3-201ENST00000324659 COPS6Q7L5N1 327 aa14.22□□□□□ -0.13
NLRC3-201ENST00000324659 ERCC4Q92889 916 aaPredicted RBP14.22□□□□□ -0.13
NLRC3-201ENST00000324659 SLFNL1Q499Z3 407 aa14.21□□□□□ -0.13
NLRC3-201ENST00000324659 ARHGEF25Q86VW2 580 aa14.21□□□□□ -0.13
NLRC3-201ENST00000324659 NPHP1O15259 732 aa14.21□□□□□ -0.13
NLRC3-201ENST00000324659 GUCY1B3Q02153 619 aa14.21□□□□□ -0.14
NLRC3-201ENST00000324659 MTX1Q13505 466 aa14.21□□□□□ -0.14
NLRC3-201ENST00000324659 XAGE3Q8WTP9 111 aa14.21□□□□□ -0.14
NLRC3-201ENST00000324659 PGBD1Q96JS3 809 aa14.21□□□□□ -0.14
NLRC3-201ENST00000324659 SCAND2PQ9GZW5 306 aaPredicted RBP14.21□□□□□ -0.14
NLRC3-201ENST00000324659 ALDH1L1O75891 902 aa14.2□□□□□ -0.14
NLRC3-201ENST00000324659 EPHA10Q5JZY3 1008 aa14.2□□□□□ -0.14
NLRC3-201ENST00000324659 Q6ZUG5 572 aa14.2□□□□□ -0.14
NLRC3-201ENST00000324659 DDX46Q7L014 1031 aaKnown RBP14.2□□□□□ -0.14
NLRC3-201ENST00000324659 CERS3Q8IU89 383 aa14.2□□□□□ -0.14
NLRC3-201ENST00000324659 IPO4Q8TEX9 1081 aaKnown RBP14.2□□□□□ -0.14
NLRC3-201ENST00000324659 CLIP2Q9UDT6 1046 aa14.2□□□□□ -0.14
NLRC3-201ENST00000324659 ARID5BQ14865 1188 aa14.19□□□□□ -0.14
NLRC3-201ENST00000324659 NEUROD6Q96NK8 337 aa14.19□□□□□ -0.14
NLRC3-201ENST00000324659 HIP1O00291 1037 aa14.19□□□□□ -0.14
NLRC3-201ENST00000324659 HOXB7P09629 217 aa14.19□□□□□ -0.14
NLRC3-201ENST00000324659 GTF2F1P35269 517 aaKnown RBP eCLIP14.19□□□□□ -0.14
NLRC3-201ENST00000324659 TAF3Q5VWG9 929 aa14.19□□□□□ -0.14
NLRC3-201ENST00000324659 LINS1Q8NG48 757 aa14.19□□□□□ -0.14
NLRC3-201ENST00000324659 NPHP3Q7Z494 1330 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms