RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 ALS2CR12Q96Q35 445 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 KRT23Q9C075 422 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 RAB3GAP1Q15042 981 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 TTC41PQ6P2S7 1318 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 EXOC5O00471 708 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 PPP4R3BQ5MIZ7 849 aa12.57□□□□□ -0.4
SNRNP200-201ENST00000323853 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 TESK2Q96S53 571 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 POLKQ9UBT6 870 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 PBRM1Q86U86 1689 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 DYNC1I1O14576 645 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 ZFYP08048 801 aaPredicted RBP12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 USP8P40818 1118 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 RLBP1P12271 317 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 KSR2Q6VAB6 950 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 XAGE3Q8WTP9 111 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 PPFIA3O75145 1194 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 SMC5Q8IY18 1101 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 MSH6P52701 1360 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 NPATQ14207 1427 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 UHRF1BP1Q6BDS2 1440 aa12.56□□□□□ -0.4
SNRNP200-201ENST00000323853 GRM8O00222 908 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 LUZP1Q86V48 1076 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 TCP11L1Q9NUJ3 509 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 ADGBQ8N7X0 1667 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 SYKP43405 635 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 SPTY2D1Q68D10 685 aaPredicted RBP12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 TEX14Q8IWB6 1497 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 TDRD12Q587J7 1177 aaKnown RBP12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 KCNG4Q8TDN1 519 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 DCTPP1Q9H773 170 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 RMND1Q9NWS8 449 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 WTAPQ15007 396 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 TSPY2A6NKD2 308 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 VAMP4O75379 141 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 XRCC6P12956 609 aaKnown RBP eCLIP12.55□□□□□ -0.42e-7■□□□□ 9.2
SNRNP200-201ENST00000323853 PLCD4Q9BRC7 762 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 ZBTB40Q9NUA8 1239 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
SNRNP200-201ENST00000323853 CALRP27797 417 aaKnown RBP12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 CETN2P41208 172 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 PAFAH1B1P43034 410 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 CCDC152Q4G0S7 254 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 PANK2Q9BZ23 570 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 FLT4P35916 1363 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 LRRC2Q9BYS8 371 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 CNNM2Q9H8M5 875 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 ALG1Q9BT22 464 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 TSPYL6Q8N831 410 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 CRNKL1Q9BZJ0 848 aaKnown RBP12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 GOPCQ9HD26 462 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 GSTO1P78417 241 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 MRPS27Q92552 414 aaKnown RBP12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 ZNF830Q96NB3 372 aaPredicted RBP12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 POLR3GO15318 223 aaPredicted RBP12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 CCDC40Q4G0X9 1142 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 PPP4R3AQ6IN85 833 aa12.54□□□□□ -0.4
SNRNP200-201ENST00000323853 ZBTB43O43298 467 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 BAG3O95817 575 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 CARD14Q9BXL6 1004 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 LRRC27Q9C0I9 530 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 RBM25P49756 843 aaKnown RBP12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 PLEKHM2Q8IWE5 1019 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 DNM1Q05193 864 aaKnown RBP12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 COPS6Q7L5N1 327 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 PAG1Q9NWQ8 432 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.53□□□□□ -0.43e-8■□□□□ 11.1
SNRNP200-201ENST00000323853 SLC4A4Q9Y6R1 1079 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 LDHCP07864 332 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 FAM200AQ8TCP9 573 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 ADAMTS2O95450 1211 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 UBASH3AP57075 661 aa12.53□□□□□ -0.4
SNRNP200-201ENST00000323853 DNA2P51530 1060 aa12.52□□□□□ -0.4
SNRNP200-201ENST00000323853 CTAGE1Q96RT6 745 aa12.52□□□□□ -0.4
SNRNP200-201ENST00000323853 EXOC1Q9NV70 894 aa12.52□□□□□ -0.4
SNRNP200-201ENST00000323853 AK2P54819 239 aa12.52□□□□□ -0.4
SNRNP200-201ENST00000323853 IL15P40933 162 aaPredicted RBP12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 IFFO1Q0D2I5 559 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 NOLC1Q14978 699 aaKnown RBP eCLIP12.52□□□□□ -0.411e-25■□□□□ 10.3
SNRNP200-201ENST00000323853 RRAGBQ5VZM2 374 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 RUFY3Q7L099 469 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 PA2G4Q9UQ80 394 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 ABCC10Q5T3U5 1492 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 GCC2Q8IWJ2 1684 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 RTL1A6NKG5 1358 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 SLC4A8Q2Y0W8 1093 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 PAF1Q8N7H5 531 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 DYDC1Q8WWB3 177 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 ZCRB1Q8TBF4 217 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 TRPM2O94759 1503 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 CLCN1P35523 988 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 RTN1Q16799 776 aa12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 NAA15Q9BXJ9 866 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-201ENST00000323853 MAP2K1Q02750 393 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms