RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 KRT32Q14532 448 aa26.71■■□□□ 1.87
PNKP-201ENST00000322344 ME3Q16798 604 aa26.71■■□□□ 1.87
PNKP-201ENST00000322344 USPL1Q5W0Q7 1092 aa26.71■■□□□ 1.87
PNKP-201ENST00000322344 LMBR1LQ6UX01 489 aa26.71■■□□□ 1.87
PNKP-201ENST00000322344 TICAM2Q86XR7 235 aa26.71■■□□□ 1.87
PNKP-201ENST00000322344 PDLIM2Q96JY6 352 aa26.71■■□□□ 1.87
PNKP-201ENST00000322344 PAPPAQ13219 1627 aa26.71■■□□□ 1.87
PNKP-201ENST00000322344 KCPQ6ZWJ8 1503 aa26.7■■□□□ 1.87
PNKP-201ENST00000322344 GADD45BO75293 160 aaPredicted RBP26.7■■□□□ 1.87
PNKP-201ENST00000322344 FOXO4P98177 505 aa26.7■■□□□ 1.87
PNKP-201ENST00000322344 FOXD4L6Q3SYB3 417 aaPredicted RBP26.7■■□□□ 1.87
PNKP-201ENST00000322344 FOXD4L3Q6VB84 417 aaPredicted RBP26.7■■□□□ 1.87
PNKP-201ENST00000322344 HAUS7Q99871 368 aa26.7■■□□□ 1.87
PNKP-201ENST00000322344 CARD10Q9BWT7 1032 aa26.7■■□□□ 1.87
PNKP-201ENST00000322344 GDPD2Q9HCC8 539 aa26.7■■□□□ 1.87
PNKP-201ENST00000322344 KLHL34Q8N239 644 aa26.7■■□□□ 1.86
PNKP-201ENST00000322344 TSPY26PQ9H489 355 aa26.7■■□□□ 1.86
PNKP-201ENST00000322344 GPR108Q9NPR9 543 aa26.7■■□□□ 1.86
PNKP-201ENST00000322344 IL2RBP14784 551 aa26.69■■□□□ 1.86
PNKP-201ENST00000322344 RPS6KB1P23443 525 aa26.69■■□□□ 1.86
PNKP-201ENST00000322344 TPCN1Q9ULQ1 816 aa26.69■■□□□ 1.86
PNKP-201ENST00000322344 MTMR6Q9Y217 621 aa26.69■■□□□ 1.86
PNKP-201ENST00000322344 CNPY2Q9Y2B0 182 aa26.69■■□□□ 1.86
PNKP-201ENST00000322344 NUP188Q5SRE5 1749 aa26.68■■□□□ 1.86
PNKP-201ENST00000322344 UBE2HP62256 183 aa26.68■■□□□ 1.86
PNKP-201ENST00000322344 ZNF589Q86UQ0 364 aaPredicted RBP26.68■■□□□ 1.86
PNKP-201ENST00000322344 DBNDD2Q9BQY9 259 aa26.68■■□□□ 1.86
PNKP-201ENST00000322344 ST3GAL1Q11201 340 aa26.68■■□□□ 1.86
PNKP-201ENST00000322344 CCDC191Q8NCU4 936 aa26.68■■□□□ 1.86
PNKP-201ENST00000322344 LETM1O95202 739 aaPredicted RBP26.67■■□□□ 1.86
PNKP-201ENST00000322344 ZSCAN30Q86W11 494 aa26.67■■□□□ 1.86
PNKP-201ENST00000322344 TNS2Q63HR2 1409 aa26.67■■□□□ 1.86
PNKP-201ENST00000322344 TTLL7Q6ZT98 887 aa26.66■■□□□ 1.86
PNKP-201ENST00000322344 U3KPZ7 1027 aaPredicted RBP26.66■■□□□ 1.86
PNKP-201ENST00000322344 HSPA2P54652 639 aa26.66■■□□□ 1.86
PNKP-201ENST00000322344 CCDC183Q5T5S1 534 aa26.66■■□□□ 1.86
PNKP-201ENST00000322344 EDC3Q96F86 508 aaKnown RBP26.66■■□□□ 1.86
PNKP-201ENST00000322344 PDCP20941 246 aa26.65■■□□□ 1.86
PNKP-201ENST00000322344 IL15P40933 162 aaPredicted RBP26.65■■□□□ 1.86
PNKP-201ENST00000322344 MCMDC2Q4G0Z9 681 aa26.65■■□□□ 1.86
PNKP-201ENST00000322344 DDX54Q8TDD1 881 aaKnown RBP26.65■■□□□ 1.86
PNKP-201ENST00000322344 DNAJC2Q99543 621 aaKnown RBP26.65■■□□□ 1.86
PNKP-201ENST00000322344 ATG3Q9NT62 314 aa26.65■■□□□ 1.86
PNKP-201ENST00000322344 CHMP3Q9Y3E7 222 aa26.65■■□□□ 1.86
PNKP-201ENST00000322344 TJP1Q07157 1748 aa26.63■■□□□ 1.85
PNKP-201ENST00000322344 A1BGP04217 495 aa26.63■■□□□ 1.85
PNKP-201ENST00000322344 NECAB1Q8N987 351 aa26.63■■□□□ 1.85
PNKP-201ENST00000322344 KBTBD3Q8NAB2 608 aa26.63■■□□□ 1.85
PNKP-201ENST00000322344 SLAIN2Q9P270 581 aa26.63■■□□□ 1.85
PNKP-201ENST00000322344 ZNF609O15014 1411 aa26.63■■□□□ 1.85
PNKP-201ENST00000322344 PALLDQ8WX93 1383 aa26.63■■□□□ 1.85
PNKP-201ENST00000322344 ATG9AQ7Z3C6 839 aa26.63■■□□□ 1.85
PNKP-201ENST00000322344 SH3TC1Q8TE82 1336 aa26.62■■□□□ 1.85
PNKP-201ENST00000322344 FAM184AQ8NB25 1140 aa26.62■■□□□ 1.85
PNKP-201ENST00000322344 TOB2Q14106 344 aaPredicted RBP26.61■■□□□ 1.85
PNKP-201ENST00000322344 CIAO1O76071 339 aa26.61■■□□□ 1.85
PNKP-201ENST00000322344 LARP1BQ659C4 914 aaKnown RBP26.61■■□□□ 1.85
PNKP-201ENST00000322344 ABCA3Q99758 1704 aa26.61■■□□□ 1.85
PNKP-201ENST00000322344 VPS37CA5D8V6 355 aaPredicted RBP26.6■■□□□ 1.85
PNKP-201ENST00000322344 SHANK3Q9BYB0 1731 aa26.6■■□□□ 1.85
PNKP-201ENST00000322344 EYA2O00167 538 aa26.6■■□□□ 1.85
PNKP-201ENST00000322344 FIBPO43427 364 aa26.6■■□□□ 1.85
PNKP-201ENST00000322344 NEK1Q96PY6 1258 aa26.6■■□□□ 1.85
PNKP-201ENST00000322344 ANO8Q9HCE9 1232 aaPredicted RBP26.6■■□□□ 1.85
PNKP-201ENST00000322344 HELLSQ9NRZ9 838 aa26.6■■□□□ 1.85
PNKP-201ENST00000322344 MSNP26038 577 aaKnown RBP26.59■■□□□ 1.85
PNKP-201ENST00000322344 ZBTB3Q9H5J0 574 aa26.59■■□□□ 1.85
PNKP-201ENST00000322344 TAF6LQ9Y6J9 622 aa26.59■■□□□ 1.85
PNKP-201ENST00000322344 UVSSAQ2YD98 709 aa26.58■■□□□ 1.85
PNKP-201ENST00000322344 DDX46Q7L014 1031 aaKnown RBP26.58■■□□□ 1.85
PNKP-201ENST00000322344 DNM1Q05193 864 aaKnown RBP26.58■■□□□ 1.85
PNKP-201ENST00000322344 NEUROD6Q96NK8 337 aa26.58■■□□□ 1.85
PNKP-201ENST00000322344 ISCA1Q9BUE6 129 aa26.58■■□□□ 1.85
PNKP-201ENST00000322344 PAG1Q9NWQ8 432 aa26.58■■□□□ 1.85
PNKP-201ENST00000322344 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.58■■□□□ 1.85
PNKP-201ENST00000322344 TCHHQ07283 1943 aa26.57■■□□□ 1.84
PNKP-201ENST00000322344 EVA1CP58658 441 aa26.57■■□□□ 1.84
PNKP-201ENST00000322344 TEX13AQ9BXU3 409 aaPredicted RBP26.57■■□□□ 1.84
PNKP-201ENST00000322344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.56■■□□□ 1.84
PNKP-201ENST00000322344 FBXO3Q9UK99 471 aa26.56■■□□□ 1.84
PNKP-201ENST00000322344 NDUFB9Q9Y6M9 179 aa26.56■■□□□ 1.84
PNKP-201ENST00000322344 RNF214Q8ND24 703 aa26.56■■□□□ 1.84
PNKP-201ENST00000322344 HMGB1P09429 215 aaKnown RBP26.55■■□□□ 1.84
PNKP-201ENST00000322344 KRT85P78386 507 aa26.55■■□□□ 1.84
PNKP-201ENST00000322344 COL9A3Q14050 684 aaPredicted RBP26.55■■□□□ 1.84
PNKP-201ENST00000322344 TCEANC2Q96MN5 208 aa26.55■■□□□ 1.84
PNKP-201ENST00000322344 TMOD3Q9NYL9 352 aa26.55■■□□□ 1.84
PNKP-201ENST00000322344 NOL7Q9UMY1 257 aaKnown RBP26.55■■□□□ 1.84
PNKP-201ENST00000322344 TRIM28Q13263 835 aaKnown RBP26.55■■□□□ 1.84
PNKP-201ENST00000322344 CCDC129Q6ZRS4 1044 aa26.55■■□□□ 1.84
PNKP-201ENST00000322344 VSIG10Q8N0Z9 540 aa26.55■■□□□ 1.84
PNKP-201ENST00000322344 SEC62Q99442 399 aaKnown RBP26.55■■□□□ 1.84
PNKP-201ENST00000322344 DSCC1Q9BVC3 393 aa26.55■■□□□ 1.84
PNKP-201ENST00000322344 SPEF2Q9C093 1822 aa26.54■■□□□ 1.84
PNKP-201ENST00000322344 TCIRG1Q13488 830 aa26.54■■□□□ 1.84
PNKP-201ENST00000322344 STRN4Q9NRL3 753 aa26.54■■□□□ 1.84
PNKP-201ENST00000322344 CCDC39Q9UFE4 941 aa26.54■■□□□ 1.84
PNKP-201ENST00000322344 GOLIM4O00461 696 aa26.53■■□□□ 1.84
PNKP-201ENST00000322344 CYP21A2P08686 494 aa26.53■■□□□ 1.84
PNKP-201ENST00000322344 GTF3C6Q969F1 213 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms