RNA–Protein interactions for RNA: ENST00000321517.3

LINC00476-201, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 1,269 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-201ENST00000321517 HSP90AB3PQ58FF7 597 aa21.31■■□□□ 1
LINC00476-201ENST00000321517 PNMA8AQ86V59 439 aaPredicted RBP21.31■■□□□ 1
LINC00476-201ENST00000321517 CNTNAP1P78357 1384 aa21.31■■□□□ 1
LINC00476-201ENST00000321517 TMEM88BA6NKF7 163 aa21.3■■□□□ 1
LINC00476-201ENST00000321517 PPIP5K2O43314 1243 aa21.3■■□□□ 1
LINC00476-201ENST00000321517 HOXB7P09629 217 aa21.3■■□□□ 1
LINC00476-201ENST00000321517 SLFN5Q08AF3 891 aa21.3■■□□□ 1
LINC00476-201ENST00000321517 HDGFL1Q5TGJ6 251 aa21.3■■□□□ 1
LINC00476-201ENST00000321517 DUSP27Q5VZP5 1158 aa21.3■■□□□ 1
LINC00476-201ENST00000321517 RTFDC1Q9BY42 306 aaPredicted RBP21.3■■□□□ 1
LINC00476-201ENST00000321517 MBIPQ9NS73 344 aa21.3■■□□□ 1
LINC00476-201ENST00000321517 ATP5J2-PTCD1G3V325 749 aa21.29■■□□□ 1
LINC00476-201ENST00000321517 BBOX1O75936 387 aa21.29■■□□□ 1
LINC00476-201ENST00000321517 VEGFBP49765 207 aa21.29■■□□□ 1
LINC00476-201ENST00000321517 ANKRD13DQ6ZTN6 518 aa21.29■■□□□ 1
LINC00476-201ENST00000321517 SP8Q8IXZ3 490 aa21.29■■□□□ 1
LINC00476-201ENST00000321517 PLBD2Q8NHP8 589 aa21.29■■□□□ 1
LINC00476-201ENST00000321517 ISCA1Q9BUE6 129 aa21.29■■□□□ 1
LINC00476-201ENST00000321517 SH3TC1Q8TE82 1336 aa21.29■■□□□ 1
LINC00476-201ENST00000321517 CXCL9Q07325 125 aa21.28■■□□□ 1
LINC00476-201ENST00000321517 NIM1KQ8IY84 436 aa21.28■■□□□ 1
LINC00476-201ENST00000321517 TRMT2AQ8IZ69 625 aaKnown RBP21.28■■□□□ 1
LINC00476-201ENST00000321517 FAM89AQ96GI7 184 aa21.27■■□□□ 1
LINC00476-201ENST00000321517 COL4A1P02462 1669 aa21.27■■□□□ 1
LINC00476-201ENST00000321517 GRAPQ13588 217 aa21.26■□□□□ 0.99
LINC00476-201ENST00000321517 DDX46Q7L014 1031 aaKnown RBP21.26■□□□□ 0.99
LINC00476-201ENST00000321517 TNS4Q8IZW8 715 aa21.26■□□□□ 0.99
LINC00476-201ENST00000321517 MPNDQ8N594 471 aa21.26■□□□□ 0.99
LINC00476-201ENST00000321517 GRAPLQ8TC17 118 aaPredicted RBP21.26■□□□□ 0.99
LINC00476-201ENST00000321517 DBF4Q9UBU7 674 aaPredicted RBP21.26■□□□□ 0.99
LINC00476-201ENST00000321517 FANCIQ9NVI1 1328 aa21.26■□□□□ 0.99
LINC00476-201ENST00000321517 CT47B1P0C2W7 299 aaPredicted RBP21.25■□□□□ 0.99
LINC00476-201ENST00000321517 RTL5Q5HYW3 569 aaPredicted RBP21.25■□□□□ 0.99
LINC00476-201ENST00000321517 DPP8Q6V1X1 898 aaPredicted RBP21.25■□□□□ 0.99
LINC00476-201ENST00000321517 DDX60Q8IY21 1712 aaKnown RBP21.25■□□□□ 0.99
LINC00476-201ENST00000321517 VPS33BQ9H267 617 aa21.25■□□□□ 0.99
LINC00476-201ENST00000321517 ZNRF3Q9ULT6 936 aa21.25■□□□□ 0.99
LINC00476-201ENST00000321517 ELL2O00472 640 aaPredicted RBP21.24■□□□□ 0.99
LINC00476-201ENST00000321517 FOXN1O15353 648 aa21.24■□□□□ 0.99
LINC00476-201ENST00000321517 LMOD1P29536 600 aaPredicted RBP21.24■□□□□ 0.99
LINC00476-201ENST00000321517 CELF1Q92879 486 aaKnown RBP21.24■□□□□ 0.99
LINC00476-201ENST00000321517 PHAXQ9H814 394 aaKnown RBP21.24■□□□□ 0.99
LINC00476-201ENST00000321517 TRAF5O00463 557 aa21.23■□□□□ 0.99
LINC00476-201ENST00000321517 CAPN15O75808 1086 aa21.23■□□□□ 0.99
LINC00476-201ENST00000321517 KIAA2012Q0VF49 1180 aa21.23■□□□□ 0.99
LINC00476-201ENST00000321517 TMX4Q9H1E5 349 aaPredicted RBP21.23■□□□□ 0.99
LINC00476-201ENST00000321517 SPINK5Q9NQ38 1064 aaPredicted RBP21.23■□□□□ 0.99
LINC00476-201ENST00000321517 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
LINC00476-201ENST00000321517 GPRC5DQ9NZD1 345 aa21.23■□□□□ 0.99
LINC00476-201ENST00000321517 RASSF10A6NK89 507 aa21.22■□□□□ 0.99
LINC00476-201ENST00000321517 YDJCA8MPS7 323 aa21.22■□□□□ 0.99
LINC00476-201ENST00000321517 GMPSP49915 693 aaPredicted RBP21.22■□□□□ 0.99
LINC00476-201ENST00000321517 SF3B3Q15393 1217 aaKnown RBP21.22■□□□□ 0.99
LINC00476-201ENST00000321517 USP50Q70EL3 339 aaPredicted RBP21.22■□□□□ 0.99
LINC00476-201ENST00000321517 C8orf58Q8NAV2 365 aa21.22■□□□□ 0.99
LINC00476-201ENST00000321517 SUPT20HQ8NEM7 779 aa21.22■□□□□ 0.99
LINC00476-201ENST00000321517 DUOX1Q9NRD9 1551 aa21.22■□□□□ 0.99
LINC00476-201ENST00000321517 SHTN1A0MZ66 631 aa21.21■□□□□ 0.99
LINC00476-201ENST00000321517 RAD17O75943 681 aa21.21■□□□□ 0.99
LINC00476-201ENST00000321517 TRIM28Q13263 835 aaKnown RBP21.21■□□□□ 0.99
LINC00476-201ENST00000321517 DEFB115Q30KQ5 88 aa21.21■□□□□ 0.99
LINC00476-201ENST00000321517 CST9Q5W186 159 aa21.21■□□□□ 0.99
LINC00476-201ENST00000321517 TSR2Q969E8 191 aaKnown RBP21.21■□□□□ 0.99
LINC00476-201ENST00000321517 HIRAP54198 1017 aaPredicted RBP21.2■□□□□ 0.98
LINC00476-201ENST00000321517 CIAPIN1Q6FI81 312 aa21.19■□□□□ 0.98
LINC00476-201ENST00000321517 CDCA7LQ96GN5 454 aa21.19■□□□□ 0.98
LINC00476-201ENST00000321517 YTHDC1Q96MU7 727 aaKnown RBP21.19■□□□□ 0.98
LINC00476-201ENST00000321517 ADARB2Q9NS39 739 aaKnown RBP21.19■□□□□ 0.98
LINC00476-201ENST00000321517 WBP1LQ9NX94 342 aa21.19■□□□□ 0.98
LINC00476-201ENST00000321517 IRS4O14654 1257 aaPredicted RBP21.18■□□□□ 0.98
LINC00476-201ENST00000321517 TWISTNBQ3B726 338 aaPredicted RBP21.18■□□□□ 0.98
LINC00476-201ENST00000321517 JARID2Q92833 1246 aaPredicted RBP21.18■□□□□ 0.98
LINC00476-201ENST00000321517 POLLQ9UGP5 575 aa21.18■□□□□ 0.98
LINC00476-201ENST00000321517 LRRC37AA6NMS7 1700 aa21.18■□□□□ 0.98
LINC00476-201ENST00000321517 GPSM2P81274 684 aa21.17■□□□□ 0.98
LINC00476-201ENST00000321517 RIC3Q7Z5B4 369 aa21.17■□□□□ 0.98
LINC00476-201ENST00000321517 TSPYL6Q8N831 410 aa21.17■□□□□ 0.98
LINC00476-201ENST00000321517 KCNQ5Q9NR82 932 aa21.17■□□□□ 0.98
LINC00476-201ENST00000321517 ABT1Q9ULW3 272 aaKnown RBP21.17■□□□□ 0.98
LINC00476-201ENST00000321517 NSFL1CQ9UNZ2 370 aaKnown RBP21.17■□□□□ 0.98
LINC00476-201ENST00000321517 WDR33Q9C0J8 1336 aaKnown RBP21.17■□□□□ 0.98
LINC00476-201ENST00000321517 EXOSC9Q06265 439 aaKnown RBP21.16■□□□□ 0.98
LINC00476-201ENST00000321517 TMC4Q7Z404 712 aa21.16■□□□□ 0.98
LINC00476-201ENST00000321517 TRPM4Q8TD43 1214 aa21.16■□□□□ 0.98
LINC00476-201ENST00000321517 GPR101Q96P66 508 aaPredicted RBP21.16■□□□□ 0.98
LINC00476-201ENST00000321517 MYD88Q99836 296 aa21.16■□□□□ 0.98
LINC00476-201ENST00000321517 SEC31BQ9NQW1 1179 aa21.16■□□□□ 0.98
LINC00476-201ENST00000321517 PGAP2Q9UHJ9 254 aa21.16■□□□□ 0.98
LINC00476-201ENST00000321517 RIMBP2O15034 1052 aa21.15■□□□□ 0.98
LINC00476-201ENST00000321517 CCDC30Q5VVM6 783 aa21.15■□□□□ 0.98
LINC00476-201ENST00000321517 GLIS2Q9BZE0 524 aaPredicted RBP21.15■□□□□ 0.98
LINC00476-201ENST00000321517 ZBTB12Q9Y330 459 aaPredicted RBP21.15■□□□□ 0.98
LINC00476-201ENST00000321517 TRPM7Q96QT4 1865 aa21.14■□□□□ 0.97
LINC00476-201ENST00000321517 VAMP4O75379 141 aa21.14■□□□□ 0.97
LINC00476-201ENST00000321517 RPS8P62241 208 aaKnown RBP21.14■□□□□ 0.97
LINC00476-201ENST00000321517 TNIP1Q15025 636 aa21.14■□□□□ 0.97
LINC00476-201ENST00000321517 WASHC4Q2M389 1173 aa21.14■□□□□ 0.97
LINC00476-201ENST00000321517 ZBTB38Q8NAP3 1195 aaPredicted RBP21.14■□□□□ 0.97
LINC00476-201ENST00000321517 BCL2L13Q9BXK5 485 aa21.14■□□□□ 0.97
LINC00476-201ENST00000321517 DBNDD1Q9H9R9 158 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms