RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 APBB1IPQ7Z5R6 666 aaPredicted RBP19.22■□□□□ 0.67
SMCHD1-201ENST00000320876 KRT13P13646 458 aa19.22■□□□□ 0.67
SMCHD1-201ENST00000320876 STAT6P42226 847 aa19.22■□□□□ 0.67
SMCHD1-201ENST00000320876 HDXQ7Z353 690 aa19.22■□□□□ 0.67
SMCHD1-201ENST00000320876 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
SMCHD1-201ENST00000320876 SETDB1Q15047 1291 aa19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 FAM76AQ8TAV0 307 aa19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 DDX54Q8TDD1 881 aaKnown RBP19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 PUF60Q9UHX1 559 aaKnown RBP19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 IARSP41252 1262 aaKnown RBP19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 SPAG1Q07617 926 aa19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 SSH1Q8WYL5 1049 aa19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 MKRN1Q9UHC7 482 aaKnown RBP19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 CFAP58Q5T655 872 aa19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 CWC25Q9NXE8 425 aaPredicted RBP19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 TBCAO75347 108 aaKnown RBP19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 PSMC4P43686 418 aa19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 LACTBP83111 547 aaPredicted RBP19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 MAP3K9P80192 1104 aa19.21■□□□□ 0.67
SMCHD1-201ENST00000320876 TMEM67Q5HYA8 995 aa19.21■□□□□ 0.66
SMCHD1-201ENST00000320876 ERMNQ8TAM6 284 aa19.21■□□□□ 0.66
SMCHD1-201ENST00000320876 CUL7Q14999 1698 aa19.2■□□□□ 0.66
SMCHD1-201ENST00000320876 CCDC110Q8TBZ0 833 aa19.2■□□□□ 0.66
SMCHD1-201ENST00000320876 A0A1B0GUA9 196 aa19.2■□□□□ 0.66
SMCHD1-201ENST00000320876 PDE4BQ07343 736 aa19.2■□□□□ 0.66
SMCHD1-201ENST00000320876 RRS1Q15050 365 aaKnown RBP19.2■□□□□ 0.66
SMCHD1-201ENST00000320876 IFT74Q96LB3 600 aa19.2■□□□□ 0.66
SMCHD1-201ENST00000320876 PPM1FP49593 454 aaPredicted RBP19.2■□□□□ 0.66
SMCHD1-201ENST00000320876 GIMAP6Q6P9H5 292 aa19.2■□□□□ 0.66
SMCHD1-201ENST00000320876 ZKSCAN5Q9Y2L8 839 aa19.2■□□□□ 0.66
SMCHD1-201ENST00000320876 MRPS9P82933 396 aaKnown RBP19.2■□□□□ 0.66
SMCHD1-201ENST00000320876 ATP2A2P16615 1042 aaKnown RBP19.2■□□□□ 0.66
SMCHD1-201ENST00000320876 ALDH3A1P30838 453 aa19.19■□□□□ 0.66
SMCHD1-201ENST00000320876 GSTA5Q7RTV2 222 aa19.19■□□□□ 0.66
SMCHD1-201ENST00000320876 PSMD1Q99460 953 aa19.19■□□□□ 0.66
SMCHD1-201ENST00000320876 OGFRQ9NZT2 677 aa19.19■□□□□ 0.66
SMCHD1-201ENST00000320876 CCDC82Q8N4S0 544 aa19.19■□□□□ 0.66
SMCHD1-201ENST00000320876 STMN2Q93045 179 aa19.19■□□□□ 0.66
SMCHD1-201ENST00000320876 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
SMCHD1-201ENST00000320876 CAMSAP2Q08AD1 1489 aa19.19■□□□□ 0.66
SMCHD1-201ENST00000320876 KIF5AQ12840 1032 aa19.19■□□□□ 0.66
SMCHD1-201ENST00000320876 MFSD6Q6ZSS7 791 aa19.19■□□□□ 0.66
SMCHD1-201ENST00000320876 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
SMCHD1-201ENST00000320876 DNAJC21Q5F1R6 531 aaKnown RBP19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 RNF216Q9NWF9 866 aaPredicted RBP19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 MIPOL1Q8TD10 442 aa19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 SELENOSQ9BQE4 189 aa19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 IDEP14735 1019 aa19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 VAV2P52735 878 aa19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 NAA25Q14CX7 972 aa19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 ISM2Q6H9L7 571 aa19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 ZEB2O60315 1214 aa19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 SPAG5Q96R06 1193 aa19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 A0A1B0GUL7 405 aa19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 ATP5DP30049 168 aa19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 NCOA7Q8NI08 942 aa19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 TFIP11Q9UBB9 837 aaKnown RBP19.18■□□□□ 0.66
SMCHD1-201ENST00000320876 CCDC50Q8IVM0 306 aa19.17■□□□□ 0.66
SMCHD1-201ENST00000320876 ARAP1Q96P48 1450 aa19.17■□□□□ 0.66
SMCHD1-201ENST00000320876 ARFGAP2Q8N6H7 521 aa19.17■□□□□ 0.66
SMCHD1-201ENST00000320876 CCDC63Q8NA47 563 aa19.17■□□□□ 0.66
SMCHD1-201ENST00000320876 TTC22Q5TAA0 569 aa19.17■□□□□ 0.66
SMCHD1-201ENST00000320876 MICU3Q86XE3 530 aa19.17■□□□□ 0.66
SMCHD1-201ENST00000320876 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
SMCHD1-201ENST00000320876 CCDC14Q49A88 953 aa19.17■□□□□ 0.66
SMCHD1-201ENST00000320876 A6NNZ2 444 aa19.17■□□□□ 0.66
SMCHD1-201ENST00000320876 TUBB8Q3ZCM7 444 aa19.17■□□□□ 0.66
SMCHD1-201ENST00000320876 ODF2LQ9ULJ1 636 aa19.17■□□□□ 0.66
SMCHD1-201ENST00000320876 TPD52P55327 224 aaPredicted RBP19.16■□□□□ 0.66
SMCHD1-201ENST00000320876 RTL1A6NKG5 1358 aa19.16■□□□□ 0.66
SMCHD1-201ENST00000320876 ARL1P40616 181 aaPredicted RBP19.16■□□□□ 0.66
SMCHD1-201ENST00000320876 CCDC85AQ96PX6 553 aaPredicted RBP19.16■□□□□ 0.66
SMCHD1-201ENST00000320876 CIB2O75838 187 aa19.16■□□□□ 0.66
SMCHD1-201ENST00000320876 SETSIPP0DME0 302 aa19.16■□□□□ 0.66
SMCHD1-201ENST00000320876 GBP1P32455 592 aa19.16■□□□□ 0.66
SMCHD1-201ENST00000320876 USP16Q9Y5T5 823 aa19.16■□□□□ 0.66
SMCHD1-201ENST00000320876 PPP1R1BQ9UD71 204 aaPredicted RBP19.16■□□□□ 0.66
SMCHD1-201ENST00000320876 NEK1Q96PY6 1258 aa19.16■□□□□ 0.66
SMCHD1-201ENST00000320876 TRIM7Q9C029 511 aa19.16■□□□□ 0.66
SMCHD1-201ENST00000320876 CEP128Q6ZU80 1094 aa19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 BICD1Q96G01 975 aa19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 FMNL3Q8IVF7 1028 aa19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 PSMA7O14818 248 aa19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 SMC1BQ8NDV3 1235 aa19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 RRAGBQ5VZM2 374 aa19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 MTRF1LQ9UGC7 380 aaKnown RBP19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 PCF11O94913 1555 aaKnown RBP19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 KIAA1524Q8TCG1 905 aa19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 KAT14Q9H8E8 782 aa19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 CNPY2Q9Y2B0 182 aa19.15■□□□□ 0.66
SMCHD1-201ENST00000320876 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.15■□□□□ 0.664e-7■■■■■ 68.8
SMCHD1-201ENST00000320876 TAF7Q15545 349 aaPredicted RBP19.14■□□□□ 0.66
SMCHD1-201ENST00000320876 ZNF830Q96NB3 372 aaPredicted RBP19.14■□□□□ 0.66
SMCHD1-201ENST00000320876 SAMM50Q9Y512 469 aa19.14■□□□□ 0.66
SMCHD1-201ENST00000320876 TRIM27P14373 513 aa19.14■□□□□ 0.66
SMCHD1-201ENST00000320876 CCDC144CPQ8IYA2 1237 aa19.14■□□□□ 0.66
SMCHD1-201ENST00000320876 RALGAPBQ86X10 1494 aa19.14■□□□□ 0.65
SMCHD1-201ENST00000320876 BICDL2A1A5D9 508 aa19.14■□□□□ 0.65
SMCHD1-201ENST00000320876 SLC26A6Q9BXS9 759 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms