RNA–Protein interactions for RNA: ENST00000318809.11

LTBP4-204, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-204ENST00000318809 TNRC6CQ9HCJ0 1690 aaKnown RBP21.86■■□□□ 1.09
LTBP4-204ENST00000318809 ST5P78524 1137 aa21.86■■□□□ 1.09
LTBP4-204ENST00000318809 SSH3Q8TE77 659 aa21.86■■□□□ 1.09
LTBP4-204ENST00000318809 MYH3P11055 1940 aa21.85■■□□□ 1.09
LTBP4-204ENST00000318809 HSP90B1P14625 803 aaKnown RBP21.85■■□□□ 1.09
LTBP4-204ENST00000318809 POLA2Q14181 598 aa21.85■■□□□ 1.09
LTBP4-204ENST00000318809 FAM161AQ3B820 660 aa21.85■■□□□ 1.09
LTBP4-204ENST00000318809 CHMP3Q9Y3E7 222 aa21.85■■□□□ 1.09
LTBP4-204ENST00000318809 HDAC1Q13547 482 aaPredicted RBP21.84■■□□□ 1.09
LTBP4-204ENST00000318809 GREM2Q9H772 168 aa21.84■■□□□ 1.09
LTBP4-204ENST00000318809 RIC1Q4ADV7 1423 aa21.84■■□□□ 1.09
LTBP4-204ENST00000318809 RFX5P48382 616 aaPredicted RBP21.83■■□□□ 1.09
LTBP4-204ENST00000318809 SF3B3Q15393 1217 aaKnown RBP21.83■■□□□ 1.09
LTBP4-204ENST00000318809 NLRP3Q96P20 1036 aa21.83■■□□□ 1.09
LTBP4-204ENST00000318809 SGIP1Q9BQI5 828 aa21.83■■□□□ 1.09
LTBP4-204ENST00000318809 ANKRD31Q8N7Z5 1873 aa21.82■■□□□ 1.08
LTBP4-204ENST00000318809 PTGER2P43116 358 aa21.81■■□□□ 1.08
LTBP4-204ENST00000318809 KLHDC4Q8TBB5 520 aa21.81■■□□□ 1.08
LTBP4-204ENST00000318809 BRIP1Q9BX63 1249 aa21.81■■□□□ 1.08
LTBP4-204ENST00000318809 PA2G4Q9UQ80 394 aaKnown RBP21.81■■□□□ 1.08
LTBP4-204ENST00000318809 HMMRO75330 724 aa21.8■■□□□ 1.08
LTBP4-204ENST00000318809 CCDC152Q4G0S7 254 aa21.8■■□□□ 1.08
LTBP4-204ENST00000318809 SEC31BQ9NQW1 1179 aa21.8■■□□□ 1.08
LTBP4-204ENST00000318809 KLRG2A4D1S0 409 aaPredicted RBP21.8■■□□□ 1.08
LTBP4-204ENST00000318809 ITGA6P23229 1130 aa21.8■■□□□ 1.08
LTBP4-204ENST00000318809 CRY2Q49AN0 593 aa21.8■■□□□ 1.08
LTBP4-204ENST00000318809 ZNF594Q96JF6 807 aaPredicted RBP21.8■■□□□ 1.08
LTBP4-204ENST00000318809 COL4A1P02462 1669 aa21.79■■□□□ 1.08
LTBP4-204ENST00000318809 POLD1P28340 1107 aa21.79■■□□□ 1.08
LTBP4-204ENST00000318809 PTPN12Q05209 780 aaKnown RBP21.79■■□□□ 1.08
LTBP4-204ENST00000318809 RTL9Q8NET4 1388 aa21.79■■□□□ 1.08
LTBP4-204ENST00000318809 IFIT5Q13325 482 aaKnown RBP21.78■■□□□ 1.08
LTBP4-204ENST00000318809 CCDC57Q2TAC2 916 aa21.78■■□□□ 1.08
LTBP4-204ENST00000318809 DCTPP1Q9H773 170 aa21.78■■□□□ 1.08
LTBP4-204ENST00000318809 C10orf71Q711Q0 1435 aa21.78■■□□□ 1.08
LTBP4-204ENST00000318809 COPRSQ9NQ92 184 aa21.77■■□□□ 1.08
LTBP4-204ENST00000318809 EXOC6BQ9Y2D4 811 aa21.77■■□□□ 1.08
LTBP4-204ENST00000318809 ANKRD18BA2A2Z9 1011 aa21.76■■□□□ 1.07
LTBP4-204ENST00000318809 TAF1P21675 1872 aa21.76■■□□□ 1.07
LTBP4-204ENST00000318809 SURF6O75683 361 aaKnown RBP21.75■■□□□ 1.07
LTBP4-204ENST00000318809 PDE6BP35913 854 aa21.75■■□□□ 1.07
LTBP4-204ENST00000318809 NOP58Q9Y2X3 529 aaKnown RBP21.75■■□□□ 1.07
LTBP4-204ENST00000318809 SMC5Q8IY18 1101 aa21.75■■□□□ 1.07
LTBP4-204ENST00000318809 SIL1Q9H173 461 aa21.75■■□□□ 1.07
LTBP4-204ENST00000318809 SPON1Q9HCB6 807 aa21.75■■□□□ 1.07
LTBP4-204ENST00000318809 SRGNP10124 158 aa21.74■■□□□ 1.07
LTBP4-204ENST00000318809 COL11A2P13942 1736 aaPredicted RBP21.74■■□□□ 1.07
LTBP4-204ENST00000318809 CELF1Q92879 486 aaKnown RBP21.74■■□□□ 1.07
LTBP4-204ENST00000318809 PUS3Q9BZE2 481 aaKnown RBP21.74■■□□□ 1.07
LTBP4-204ENST00000318809 TSHZ2Q9NRE2 1034 aa21.74■■□□□ 1.07
LTBP4-204ENST00000318809 HOXA10P31260 410 aaPredicted RBP21.73■■□□□ 1.07
LTBP4-204ENST00000318809 DDX46Q7L014 1031 aaKnown RBP21.73■■□□□ 1.07
LTBP4-204ENST00000318809 RPGRQ92834 1020 aaKnown RBP21.73■■□□□ 1.07
LTBP4-204ENST00000318809 CHRNA5P30532 468 aa21.72■■□□□ 1.07
LTBP4-204ENST00000318809 LRRC24Q50LG9 513 aa21.72■■□□□ 1.07
LTBP4-204ENST00000318809 TAF7LQ5H9L4 462 aa21.72■■□□□ 1.07
LTBP4-204ENST00000318809 C2CD5Q86YS7 1000 aa21.72■■□□□ 1.07
LTBP4-204ENST00000318809 APBB1O00213 710 aa21.72■■□□□ 1.07
LTBP4-204ENST00000318809 ATG9AQ7Z3C6 839 aa21.72■■□□□ 1.07
LTBP4-204ENST00000318809 GCC1Q96CN9 775 aa21.72■■□□□ 1.07
LTBP4-204ENST00000318809 KIF13BQ9NQT8 1826 aa21.71■■□□□ 1.07
LTBP4-204ENST00000318809 RBM17Q96I25 401 aaKnown RBP21.71■■□□□ 1.07
LTBP4-204ENST00000318809 CDC5LQ99459 802 aaKnown RBP21.71■■□□□ 1.07
LTBP4-204ENST00000318809 LRP5O75197 1615 aa21.71■■□□□ 1.07
LTBP4-204ENST00000318809 EYA2O00167 538 aa21.7■■□□□ 1.06
LTBP4-204ENST00000318809 NPR1P16066 1061 aa21.7■■□□□ 1.06
LTBP4-204ENST00000318809 RPS8P62241 208 aaKnown RBP21.7■■□□□ 1.06
LTBP4-204ENST00000318809 LDHAL6AQ6ZMR3 332 aa21.7■■□□□ 1.06
LTBP4-204ENST00000318809 H0YIN7 160 aa21.69■■□□□ 1.06
LTBP4-204ENST00000318809 SASH1O94885 1247 aa21.69■■□□□ 1.06
LTBP4-204ENST00000318809 G3BP1Q13283 466 aaKnown RBP eCLIP21.69■■□□□ 1.06
LTBP4-204ENST00000318809 GRAPQ13588 217 aa21.69■■□□□ 1.06
LTBP4-204ENST00000318809 SLC51AQ86UW1 340 aa21.69■■□□□ 1.06
LTBP4-204ENST00000318809 ANKRD18AQ8IVF6 992 aa21.69■■□□□ 1.06
LTBP4-204ENST00000318809 GRAPLQ8TC17 118 aaPredicted RBP21.69■■□□□ 1.06
LTBP4-204ENST00000318809 CRAMP1Q96RY5 1269 aa21.69■■□□□ 1.06
LTBP4-204ENST00000318809 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.69■■□□□ 1.06
LTBP4-204ENST00000318809 CIAO1O76071 339 aa21.69■■□□□ 1.06
LTBP4-204ENST00000318809 IGHMBP2P38935 993 aaKnown RBP21.69■■□□□ 1.06
LTBP4-204ENST00000318809 MASTLQ96GX5 879 aa21.69■■□□□ 1.06
LTBP4-204ENST00000318809 RIPOR2Q9Y4F9 1068 aa21.69■■□□□ 1.06
LTBP4-204ENST00000318809 SRCAPQ6ZRS2 3230 aa21.69■■□□□ 1.06
LTBP4-204ENST00000318809 SPEF2Q9C093 1822 aa21.68■■□□□ 1.06
LTBP4-204ENST00000318809 OS9Q13438 667 aaPredicted RBP21.68■■□□□ 1.06
LTBP4-204ENST00000318809 PPP1R1BQ9UD71 204 aaPredicted RBP21.68■■□□□ 1.06
LTBP4-204ENST00000318809 A0A0G2JLW4 131 aa21.67■■□□□ 1.06
LTBP4-204ENST00000318809 SMARCA5O60264 1052 aaPredicted RBP21.67■■□□□ 1.06
LTBP4-204ENST00000318809 RAB11FIP3O75154 756 aa21.67■■□□□ 1.06
LTBP4-204ENST00000318809 ZNF622Q969S3 477 aaKnown RBP eCLIP21.67■■□□□ 1.06
LTBP4-204ENST00000318809 MPHOSPH8Q99549 860 aa21.67■■□□□ 1.06
LTBP4-204ENST00000318809 CNNM1Q9NRU3 951 aa21.67■■□□□ 1.06
LTBP4-204ENST00000318809 FBXO3Q9UK99 471 aa21.67■■□□□ 1.06
LTBP4-204ENST00000318809 DPEP1P16444 411 aa21.66■■□□□ 1.06
LTBP4-204ENST00000318809 KCNA3P22001 575 aa21.66■■□□□ 1.06
LTBP4-204ENST00000318809 IL15P40933 162 aaPredicted RBP21.66■■□□□ 1.06
LTBP4-204ENST00000318809 HSP90AB4PQ58FF6 505 aa21.66■■□□□ 1.06
LTBP4-204ENST00000318809 ANKRD45Q5TZF3 282 aa21.66■■□□□ 1.06
LTBP4-204ENST00000318809 STYK1Q6J9G0 422 aa21.66■■□□□ 1.06
LTBP4-204ENST00000318809 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
LTBP4-204ENST00000318809 BSDC1Q9NW68 430 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms