RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 POTEAQ6S8J7 498 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.37□□□□□ -0.59
PTPRA-202ENST00000318266 AACSQ86V21 672 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 EYA1Q99502 592 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 ACEP12821 1306 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 PI4KAP2A4QPH2 592 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 NUTM2GQ5VZR2 741 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 PI4KAP1Q8N8J0 262 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 LRRC2Q9BYS8 371 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 CCDC8Q9H0W5 538 aaPredicted RBP11.36□□□□□ -0.59
PTPRA-202ENST00000318266 ZNF446Q9NWS9 450 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 ELP1O95163 1332 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 SLC27A2O14975 620 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 HSP90B1P14625 803 aaKnown RBP11.36□□□□□ -0.59
PTPRA-202ENST00000318266 POLA2Q14181 598 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 BRF1Q92994 677 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 ZBTB9Q96C00 473 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 TIGD1Q96MW7 591 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 METP08581 1390 aa11.36□□□□□ -0.59
PTPRA-202ENST00000318266 PDE4CQ08493 712 aa11.35□□□□□ -0.59
PTPRA-202ENST00000318266 FMNL2Q96PY5 1086 aa11.35□□□□□ -0.59
PTPRA-202ENST00000318266 ECHDC1Q9NTX5 307 aa11.35□□□□□ -0.59
PTPRA-202ENST00000318266 NAP1L2Q9ULW6 460 aaPredicted RBP11.35□□□□□ -0.59
PTPRA-202ENST00000318266 BOLA2Q9H3K6 86 aa11.35□□□□□ -0.59
PTPRA-202ENST00000318266 A0A0D9SFI3 127 aa11.35□□□□□ -0.59
PTPRA-202ENST00000318266 POLR3GO15318 223 aaPredicted RBP11.35□□□□□ -0.59
PTPRA-202ENST00000318266 SLU7O95391 586 aaKnown RBP11.35□□□□□ -0.59
PTPRA-202ENST00000318266 IQCB1Q15051 598 aa11.35□□□□□ -0.59
PTPRA-202ENST00000318266 SYT10Q6XYQ8 523 aa11.35□□□□□ -0.59
PTPRA-202ENST00000318266 USHBP1Q8N6Y0 703 aa11.35□□□□□ -0.59
PTPRA-202ENST00000318266 ERO1AQ96HE7 468 aa11.35□□□□□ -0.59
PTPRA-202ENST00000318266 SIL1Q9H173 461 aa11.35□□□□□ -0.59
PTPRA-202ENST00000318266 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.35□□□□□ -0.59
PTPRA-202ENST00000318266 NYAP1Q6ZVC0 841 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 CCAR2Q8N163 923 aaKnown RBP11.34□□□□□ -0.59
PTPRA-202ENST00000318266 AOPEPQ8N6M6 819 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 IL17REQ8NFR9 667 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 EDC3Q96F86 508 aaKnown RBP11.34□□□□□ -0.59
PTPRA-202ENST00000318266 NOL10Q9BSC4 688 aaKnown RBP11.34□□□□□ -0.59
PTPRA-202ENST00000318266 TM6SF1Q9BZW5 370 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 CHPF2Q9P2E5 772 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.34□□□□□ -0.59
PTPRA-202ENST00000318266 TMEM131LA2VDJ0 1609 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 LRP5O75197 1615 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 GNAT3A8MTJ3 354 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 CCZ1BP86790 482 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 CCZ1P86791 482 aaPredicted RBP11.34□□□□□ -0.59
PTPRA-202ENST00000318266 GUCY1B3Q02153 619 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 TOB2Q14106 344 aaPredicted RBP11.34□□□□□ -0.59
PTPRA-202ENST00000318266 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPRA-202ENST00000318266 FSD1Q9BTV5 496 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 TBX22Q9Y458 520 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 TUBGCP6Q96RT7 1819 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 ERBB3P21860 1342 aa11.34□□□□□ -0.59
PTPRA-202ENST00000318266 CCDC125Q86Z20 511 aa11.33□□□□□ -0.59
PTPRA-202ENST00000318266 CCAR1Q8IX12 1150 aaKnown RBP11.33□□□□□ -0.59
PTPRA-202ENST00000318266 XRN1Q8IZH2 1706 aaKnown RBP11.33□□□□□ -0.6
PTPRA-202ENST00000318266 PSMA5P28066 241 aa11.33□□□□□ -0.6
PTPRA-202ENST00000318266 SNW1Q13573 536 aaKnown RBP11.33□□□□□ -0.6
PTPRA-202ENST00000318266 TLR7Q9NYK1 1049 aaKnown RBP11.33□□□□□ -0.6
PTPRA-202ENST00000318266 NDUFB9Q9Y6M9 179 aa11.33□□□□□ -0.6
PTPRA-202ENST00000318266 SMC2O95347 1197 aa11.33□□□□□ -0.6
PTPRA-202ENST00000318266 CHGBP05060 677 aa11.33□□□□□ -0.6
PTPRA-202ENST00000318266 RBM43Q6ZSC3 357 aaKnown RBP11.33□□□□□ -0.6
PTPRA-202ENST00000318266 ZNF589Q86UQ0 364 aaPredicted RBP11.33□□□□□ -0.6
PTPRA-202ENST00000318266 CADPS2Q86UW7 1296 aa11.33□□□□□ -0.6
PTPRA-202ENST00000318266 GPATCH3Q96I76 525 aa11.33□□□□□ -0.6
PTPRA-202ENST00000318266 GOLPH3LQ9H4A5 285 aa11.33□□□□□ -0.6
PTPRA-202ENST00000318266 C9orf78Q9NZ63 289 aaPredicted RBP11.33□□□□□ -0.6
PTPRA-202ENST00000318266 CCDC9Q9Y3X0 531 aaKnown RBP11.33□□□□□ -0.6
PTPRA-202ENST00000318266 COL22A1Q8NFW1 1626 aaPredicted RBP11.33□□□□□ -0.6
PTPRA-202ENST00000318266 RPS6KB1P23443 525 aa11.32□□□□□ -0.6
PTPRA-202ENST00000318266 STX1AQ16623 288 aa11.32□□□□□ -0.6
PTPRA-202ENST00000318266 ARHGAP29Q52LW3 1261 aa11.32□□□□□ -0.6
PTPRA-202ENST00000318266 HOMER1Q86YM7 354 aa11.32□□□□□ -0.6
PTPRA-202ENST00000318266 DNAAF4Q8WXU2 420 aa11.32□□□□□ -0.6
PTPRA-202ENST00000318266 MAP4K1Q92918 833 aa11.32□□□□□ -0.6
PTPRA-202ENST00000318266 EVI5LQ96CN4 794 aa11.32□□□□□ -0.6
PTPRA-202ENST00000318266 TTC41PQ6P2S7 1318 aa11.32□□□□□ -0.6
PTPRA-202ENST00000318266 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.32□□□□□ -0.6
PTPRA-202ENST00000318266 ARHGEF10O15013 1369 aa11.32□□□□□ -0.6
PTPRA-202ENST00000318266 MAP3K5Q99683 1374 aa11.32□□□□□ -0.6
PTPRA-202ENST00000318266 BIN1O00499 593 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 CLCN6P51797 869 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 PROSER2Q86WR7 435 aaPredicted RBP11.31□□□□□ -0.6
PTPRA-202ENST00000318266 NEK11Q8NG66 645 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 MRFAP1L1Q96HT8 127 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 KINO60870 393 aaKnown RBP11.31□□□□□ -0.6
PTPRA-202ENST00000318266 ME1P48163 572 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 RNF20Q5VTR2 975 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 CCDC73Q6ZRK6 1079 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 FAM177A1Q8N128 213 aaPredicted RBP11.31□□□□□ -0.6
PTPRA-202ENST00000318266 KLHDC4Q8TBB5 520 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 KCNQ3O43525 872 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 LTKP29376 864 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 HNRNPH2P55795 449 aaKnown RBP11.31□□□□□ -0.6
PTPRA-202ENST00000318266 RESTQ13127 1097 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 274.8 ms