RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 IL2RBP14784 551 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 EIF6P56537 245 aaKnown RBP15.97■□□□□ 0.15
EDEM3-201ENST00000318130 LAMC3Q9Y6N6 1575 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 HCLS1P14317 486 aaPredicted RBP15.97■□□□□ 0.15
EDEM3-201ENST00000318130 IFFO1Q0D2I5 559 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 UVSSAQ2YD98 709 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 NUP88Q99567 741 aaPredicted RBP15.97■□□□□ 0.15
EDEM3-201ENST00000318130 C8orf76Q96K31 380 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 UTP14AQ9BVJ6 771 aaKnown RBP15.97■□□□□ 0.15
EDEM3-201ENST00000318130 NPHP3Q7Z494 1330 aa15.96■□□□□ 0.15
EDEM3-201ENST00000318130 PPIP5K1Q6PFW1 1433 aa15.96■□□□□ 0.15
EDEM3-201ENST00000318130 FNBP4Q8N3X1 1017 aaPredicted RBP15.96■□□□□ 0.15
EDEM3-201ENST00000318130 NLRP3Q96P20 1036 aa15.96■□□□□ 0.15
EDEM3-201ENST00000318130 IGHDP01880 384 aa15.96■□□□□ 0.15
EDEM3-201ENST00000318130 TRIM21P19474 475 aaKnown RBP15.96■□□□□ 0.15
EDEM3-201ENST00000318130 GJB2P29033 226 aa15.96■□□□□ 0.15
EDEM3-201ENST00000318130 CTCFLQ8NI51 663 aaPredicted RBP15.96■□□□□ 0.15
EDEM3-201ENST00000318130 GOLGA8AA7E2F4 631 aa15.96■□□□□ 0.15
EDEM3-201ENST00000318130 GOLGA8BA8MQT2 603 aa15.96■□□□□ 0.15
EDEM3-201ENST00000318130 ZNF165P49910 485 aa15.96■□□□□ 0.15
EDEM3-201ENST00000318130 SSRP1Q08945 709 aaKnown RBP15.96■□□□□ 0.15
EDEM3-201ENST00000318130 RAB3GAP1Q15042 981 aa15.96■□□□□ 0.15
EDEM3-201ENST00000318130 MACROD2A1Z1Q3 448 aa15.96■□□□□ 0.14
EDEM3-201ENST00000318130 STX6O43752 255 aa15.96■□□□□ 0.14
EDEM3-201ENST00000318130 STX1AQ16623 288 aa15.96■□□□□ 0.14
EDEM3-201ENST00000318130 CCDC178Q5BJE1 867 aa15.96■□□□□ 0.14
EDEM3-201ENST00000318130 CTR9Q6PD62 1173 aa15.96■□□□□ 0.14
EDEM3-201ENST00000318130 LRSAM1Q6UWE0 723 aa15.96■□□□□ 0.14
EDEM3-201ENST00000318130 ZSWIM4Q9H7M6 989 aa15.96■□□□□ 0.14
EDEM3-201ENST00000318130 POTEB2H3BUK9 544 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 KRT222Q8N1A0 295 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 LRRC2Q9BYS8 371 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 PAXBP1Q9Y5B6 917 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 RBM25P49756 843 aaKnown RBP15.95■□□□□ 0.14
EDEM3-201ENST00000318130 FKBP15Q5T1M5 1219 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 COPS6Q7L5N1 327 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
EDEM3-201ENST00000318130 EFCAB5A4FU69 1503 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 ALDH1L2Q3SY69 923 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 IQCA1Q86XH1 822 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 SNRPA1P09661 255 aaKnown RBP15.95■□□□□ 0.14
EDEM3-201ENST00000318130 CALM1P0DP23 149 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 CALM2P0DP24 149 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 CALM3P0DP25 149 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 GOPCQ9HD26 462 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 KIAA0586Q9BVV6 1533 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 BAG3O95817 575 aa15.95■□□□□ 0.14
EDEM3-201ENST00000318130 NOLC1Q14978 699 aaKnown RBP eCLIP15.95■□□□□ 0.14
EDEM3-201ENST00000318130 PAFAH1B1P43034 410 aa15.94■□□□□ 0.14
EDEM3-201ENST00000318130 ATP2B3Q16720 1220 aa15.94■□□□□ 0.14
EDEM3-201ENST00000318130 CATIPQ7Z7H3 387 aa15.94■□□□□ 0.14
EDEM3-201ENST00000318130 CACNA2D4Q7Z3S7 1137 aa15.94■□□□□ 0.14
EDEM3-201ENST00000318130 SLC4A4Q9Y6R1 1079 aa15.94■□□□□ 0.14
EDEM3-201ENST00000318130 GIMAP6Q6P9H5 292 aa15.94■□□□□ 0.14
EDEM3-201ENST00000318130 CNNM3Q8NE01 707 aa15.94■□□□□ 0.14
EDEM3-201ENST00000318130 CTNNBL1Q8WYA6 563 aaPredicted RBP15.94■□□□□ 0.14
EDEM3-201ENST00000318130 FERMT2Q96AC1 680 aa15.94■□□□□ 0.14
EDEM3-201ENST00000318130 TIAM1Q13009 1591 aa15.94■□□□□ 0.14
EDEM3-201ENST00000318130 HEATR3Q7Z4Q2 680 aa15.94■□□□□ 0.14
EDEM3-201ENST00000318130 SYCP3Q8IZU3 236 aa15.94■□□□□ 0.14
EDEM3-201ENST00000318130 TMEM67Q5HYA8 995 aa15.93■□□□□ 0.14
EDEM3-201ENST00000318130 MICU3Q86XE3 530 aa15.93■□□□□ 0.14
EDEM3-201ENST00000318130 YEATS4O95619 227 aa15.93■□□□□ 0.14
EDEM3-201ENST00000318130 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.93■□□□□ 0.14
EDEM3-201ENST00000318130 TRIM27P14373 513 aa15.93■□□□□ 0.14
EDEM3-201ENST00000318130 UBE2HP62256 183 aa15.93■□□□□ 0.14
EDEM3-201ENST00000318130 ZC3H12CQ9C0D7 883 aaKnown RBP15.93■□□□□ 0.14
EDEM3-201ENST00000318130 MKRN3Q13064 507 aaKnown RBP15.93■□□□□ 0.14
EDEM3-201ENST00000318130 URB2Q14146 1524 aaKnown RBP15.92■□□□□ 0.14
EDEM3-201ENST00000318130 GNG11P61952 73 aa15.92■□□□□ 0.14
EDEM3-201ENST00000318130 BMP2KLQ5H9B9 411 aa15.92■□□□□ 0.14
EDEM3-201ENST00000318130 DBF4Q9UBU7 674 aaPredicted RBP15.92■□□□□ 0.14
EDEM3-201ENST00000318130 ZNF804AQ7Z570 1209 aa15.92■□□□□ 0.14
EDEM3-201ENST00000318130 PROCA1Q8NCQ7 364 aaPredicted RBP15.92■□□□□ 0.14
EDEM3-201ENST00000318130 ORAI2Q96SN7 254 aa15.92■□□□□ 0.14
EDEM3-201ENST00000318130 USO1O60763 962 aaKnown RBP15.92■□□□□ 0.14
EDEM3-201ENST00000318130 TCP10Q12799 353 aa15.92■□□□□ 0.14
EDEM3-201ENST00000318130 EHMT1Q9H9B1 1298 aa15.92■□□□□ 0.14
EDEM3-201ENST00000318130 CCDC12Q8WUD4 166 aaPredicted RBP15.92■□□□□ 0.14
EDEM3-201ENST00000318130 CCDC91Q7Z6B0 441 aa15.91■□□□□ 0.14
EDEM3-201ENST00000318130 MNAT1P51948 309 aa15.91■□□□□ 0.14
EDEM3-201ENST00000318130 ANKRD13DQ6ZTN6 518 aa15.91■□□□□ 0.14
EDEM3-201ENST00000318130 SMC1AQ14683 1233 aaKnown RBP15.91■□□□□ 0.14
EDEM3-201ENST00000318130 DESP17661 470 aa15.91■□□□□ 0.14
EDEM3-201ENST00000318130 ANAPC15P60006 121 aa15.91■□□□□ 0.14
EDEM3-201ENST00000318130 FLIIQ13045 1269 aa15.91■□□□□ 0.14
EDEM3-201ENST00000318130 HLTFQ14527 1009 aaKnown RBP eCLIP15.91■□□□□ 0.14
EDEM3-201ENST00000318130 SPECC1Q5M775 1068 aa15.91■□□□□ 0.14
EDEM3-201ENST00000318130 CHST3Q7LGC8 479 aa15.91■□□□□ 0.14
EDEM3-201ENST00000318130 SLC26A6Q9BXS9 759 aa15.91■□□□□ 0.14
EDEM3-201ENST00000318130 CCDC150Q8NCX0 1101 aa15.91■□□□□ 0.14
EDEM3-201ENST00000318130 PA2G4Q9UQ80 394 aaKnown RBP15.91■□□□□ 0.14
EDEM3-201ENST00000318130 RIMS2Q9UQ26 1411 aa15.9■□□□□ 0.14
EDEM3-201ENST00000318130 CCDC175P0C221 793 aa15.9■□□□□ 0.14
EDEM3-201ENST00000318130 RBM17Q96I25 401 aaKnown RBP15.9■□□□□ 0.14
EDEM3-201ENST00000318130 FAM170AA1A519 330 aa15.9■□□□□ 0.14
EDEM3-201ENST00000318130 TDRD12Q587J7 1177 aaKnown RBP15.9■□□□□ 0.14
EDEM3-201ENST00000318130 GOLGA6L9A6NEM1 432 aa15.9■□□□□ 0.14
EDEM3-201ENST00000318130 KCNQ4P56696 695 aa15.9■□□□□ 0.14
EDEM3-201ENST00000318130 COMMD10Q9Y6G5 202 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms