RNA–Protein interactions for RNA: ENST00000317216.2

EGR3-201, Transcript of early growth response 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EGR3, Length 4,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR3-201ENST00000317216 SASH1O94885 1247 aa14.84□□□□□ -0.03
EGR3-201ENST00000317216 PTPN12Q05209 780 aaKnown RBP14.84□□□□□ -0.03
EGR3-201ENST00000317216 CCDC158Q5M9N0 1113 aa14.84□□□□□ -0.03
EGR3-201ENST00000317216 TIMM10P62072 90 aa14.83□□□□□ -0.03
EGR3-201ENST00000317216 NLRP10Q86W26 655 aa14.83□□□□□ -0.03
EGR3-201ENST00000317216 SYNE4Q8N205 404 aa14.83□□□□□ -0.03
EGR3-201ENST00000317216 STAP2Q9UGK3 403 aa14.83□□□□□ -0.04
EGR3-201ENST00000317216 RTCBQ9Y3I0 505 aaKnown RBP14.83□□□□□ -0.04
EGR3-201ENST00000317216 UTYO14607 1347 aa14.83□□□□□ -0.04
EGR3-201ENST00000317216 FKBP4Q02790 459 aaKnown RBP eCLIP14.83□□□□□ -0.04
EGR3-201ENST00000317216 TBC1D2Q9BYX2 928 aa14.83□□□□□ -0.04
EGR3-201ENST00000317216 SH3TC1Q8TE82 1336 aa14.83□□□□□ -0.04
EGR3-201ENST00000317216 MRC1P22897 1456 aa14.83□□□□□ -0.04
EGR3-201ENST00000317216 EYA2O00167 538 aa14.83□□□□□ -0.04
EGR3-201ENST00000317216 CHMLP26374 656 aa14.83□□□□□ -0.04
EGR3-201ENST00000317216 TTC39AQ5SRH9 613 aa14.83□□□□□ -0.04
EGR3-201ENST00000317216 EVI5LQ96CN4 794 aa14.83□□□□□ -0.04
EGR3-201ENST00000317216 ESYT1Q9BSJ8 1104 aa14.83□□□□□ -0.04
EGR3-201ENST00000317216 ISCA1Q9BUE6 129 aa14.83□□□□□ -0.04
EGR3-201ENST00000317216 ITPK1Q13572 414 aa14.82□□□□□ -0.04
EGR3-201ENST00000317216 TNNI3KQ59H18 835 aa14.82□□□□□ -0.04
EGR3-201ENST00000317216 AKAP2Q9Y2D5 859 aa14.82□□□□□ -0.04
EGR3-201ENST00000317216 FPGT-TNNI3KV9GXZ4 949 aa14.82□□□□□ -0.04
EGR3-201ENST00000317216 DISP2A7MBM2 1401 aa14.82□□□□□ -0.04
EGR3-201ENST00000317216 MRE11P49959 708 aa14.82□□□□□ -0.04
EGR3-201ENST00000317216 CDK11BP21127 795 aaKnown RBP14.82□□□□□ -0.04
EGR3-201ENST00000317216 ITGA6P23229 1130 aa14.82□□□□□ -0.04
EGR3-201ENST00000317216 RFC4P35249 363 aa14.82□□□□□ -0.04
EGR3-201ENST00000317216 DBNDD2Q9BQY9 259 aa14.82□□□□□ -0.04
EGR3-201ENST00000317216 HIP1O00291 1037 aa14.81□□□□□ -0.04
EGR3-201ENST00000317216 AOX1Q06278 1338 aa14.81□□□□□ -0.04
EGR3-201ENST00000317216 NEK4P51957 841 aa14.81□□□□□ -0.04
EGR3-201ENST00000317216 RABEP1Q15276 862 aa14.81□□□□□ -0.04
EGR3-201ENST00000317216 LRRC24Q50LG9 513 aa14.81□□□□□ -0.04
EGR3-201ENST00000317216 TLR7Q9NYK1 1049 aaKnown RBP14.81□□□□□ -0.04
EGR3-201ENST00000317216 ERVV-1B6SEH8 477 aa14.81□□□□□ -0.04
EGR3-201ENST00000317216 PANK2Q9BZ23 570 aa14.81□□□□□ -0.04
EGR3-201ENST00000317216 IFIT1P09914 478 aaKnown RBP14.8□□□□□ -0.04
EGR3-201ENST00000317216 IGHMBP2P38935 993 aaKnown RBP14.8□□□□□ -0.04
EGR3-201ENST00000317216 FAM13BQ9NYF5 915 aa14.8□□□□□ -0.04
EGR3-201ENST00000317216 PDE8AO60658 829 aa14.8□□□□□ -0.04
EGR3-201ENST00000317216 PKD1L3Q7Z443 1732 aa14.8□□□□□ -0.04
EGR3-201ENST00000317216 CRYBG1Q9Y4K1 1723 aa14.8□□□□□ -0.04
EGR3-201ENST00000317216 PARP10Q53GL7 1025 aa14.8□□□□□ -0.04
EGR3-201ENST00000317216 SETDB2Q96T68 719 aa14.8□□□□□ -0.04
EGR3-201ENST00000317216 COL16A1Q07092 1604 aaPredicted RBP14.8□□□□□ -0.04
EGR3-201ENST00000317216 EIF5P55010 431 aaKnown RBP14.8□□□□□ -0.04
EGR3-201ENST00000317216 USP26Q9BXU7 913 aa14.8□□□□□ -0.04
EGR3-201ENST00000317216 PUS3Q9BZE2 481 aaKnown RBP14.8□□□□□ -0.04
EGR3-201ENST00000317216 PDCL3Q9H2J4 239 aa14.8□□□□□ -0.04
EGR3-201ENST00000317216 FOXO4P98177 505 aa14.79□□□□□ -0.04
EGR3-201ENST00000317216 TRIM28Q13263 835 aaKnown RBP14.79□□□□□ -0.04
EGR3-201ENST00000317216 SMIM5Q71RC9 77 aa14.79□□□□□ -0.04
EGR3-201ENST00000317216 DDX46Q7L014 1031 aaKnown RBP14.79□□□□□ -0.04
EGR3-201ENST00000317216 ZKSCAN1P17029 563 aaPredicted RBP14.79□□□□□ -0.04
EGR3-201ENST00000317216 RBM25P49756 843 aaKnown RBP14.79□□□□□ -0.04
EGR3-201ENST00000317216 RABL6Q3YEC7 729 aaPredicted RBP14.79□□□□□ -0.04
EGR3-201ENST00000317216 NBPF5PQ86XG9 351 aaPredicted RBP14.79□□□□□ -0.04
EGR3-201ENST00000317216 SNRKQ9NRH2 765 aa14.79□□□□□ -0.04
EGR3-201ENST00000317216 NDUFB9Q9Y6M9 179 aa14.79□□□□□ -0.04
EGR3-201ENST00000317216 SLIT2O94813 1529 aa14.79□□□□□ -0.04
EGR3-201ENST00000317216 CTSWP56202 376 aa14.79□□□□□ -0.04
EGR3-201ENST00000317216 MCTP1Q6DN14 999 aa14.79□□□□□ -0.04
EGR3-201ENST00000317216 GREM2Q9H772 168 aa14.79□□□□□ -0.04
EGR3-201ENST00000317216 A0A1B0GUL7 405 aa14.78□□□□□ -0.04
EGR3-201ENST00000317216 GOLIM4O00461 696 aa14.78□□□□□ -0.04
EGR3-201ENST00000317216 CCDC152Q4G0S7 254 aa14.78□□□□□ -0.04
EGR3-201ENST00000317216 HELBQ8NG08 1087 aaPredicted RBP14.78□□□□□ -0.04
EGR3-201ENST00000317216 WASHC4Q2M389 1173 aa14.78□□□□□ -0.04
EGR3-201ENST00000317216 ABCA3Q99758 1704 aa14.78□□□□□ -0.04
EGR3-201ENST00000317216 LRRFIP1Q32MZ4 808 aaKnown RBP14.78□□□□□ -0.04
EGR3-201ENST00000317216 PI4K2BQ8TCG2 481 aa14.78□□□□□ -0.04
EGR3-201ENST00000317216 TRIM37O94972 964 aa14.78□□□□□ -0.04
EGR3-201ENST00000317216 INTS5Q6P9B9 1019 aaKnown RBP14.78□□□□□ -0.04
EGR3-201ENST00000317216 ATP2B3Q16720 1220 aa14.77□□□□□ -0.04
EGR3-201ENST00000317216 PTF1AQ7RTS3 328 aa14.77□□□□□ -0.04
EGR3-201ENST00000317216 KRT27Q7Z3Y8 459 aa14.77□□□□□ -0.04
EGR3-201ENST00000317216 DBNLQ9UJU6 430 aaKnown RBP14.77□□□□□ -0.04
EGR3-201ENST00000317216 XRCC6P12956 609 aaKnown RBP eCLIP14.77□□□□□ -0.05
EGR3-201ENST00000317216 SUSD4Q5VX71 490 aa14.77□□□□□ -0.05
EGR3-201ENST00000317216 VPS37DQ86XT2 251 aa14.77□□□□□ -0.05
EGR3-201ENST00000317216 EDC3Q96F86 508 aaKnown RBP14.77□□□□□ -0.05
EGR3-201ENST00000317216 TRAPPC3LQ5T215 181 aa14.77□□□□□ -0.05
EGR3-201ENST00000317216 UPF3BQ9BZI7 483 aaKnown RBP14.77□□□□□ -0.05
EGR3-201ENST00000317216 USPL1Q5W0Q7 1092 aa14.76□□□□□ -0.05
EGR3-201ENST00000317216 CCDC24Q8N4L8 307 aa14.76□□□□□ -0.05
EGR3-201ENST00000317216 BCL9LQ86UU0 1499 aa14.76□□□□□ -0.05
EGR3-201ENST00000317216 LINC00116Q8NCU8 138 aa14.76□□□□□ -0.05
EGR3-201ENST00000317216 TTLL11Q8NHH1 800 aa14.75□□□□□ -0.05
EGR3-201ENST00000317216 BBXQ8WY36 941 aaPredicted RBP14.75□□□□□ -0.05
EGR3-201ENST00000317216 COL15A1P39059 1388 aa14.75□□□□□ -0.05
EGR3-201ENST00000317216 K7ELQ4 463 aaPredicted RBP14.75□□□□□ -0.05
EGR3-201ENST00000317216 NASPP49321 788 aaPredicted RBP14.75□□□□□ -0.05
EGR3-201ENST00000317216 RNF20Q5VTR2 975 aa14.75□□□□□ -0.05
EGR3-201ENST00000317216 FAM196AQ6ZSG2 479 aa14.75□□□□□ -0.05
EGR3-201ENST00000317216 KCPQ6ZWJ8 1503 aa14.75□□□□□ -0.05
EGR3-201ENST00000317216 CASP7P55210 303 aa14.75□□□□□ -0.05
EGR3-201ENST00000317216 CDC5LQ99459 802 aaKnown RBP14.75□□□□□ -0.05
EGR3-201ENST00000317216 RFX5P48382 616 aaPredicted RBP14.74□□□□□ -0.05
EGR3-201ENST00000317216 NUCB2P80303 420 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms