RNA–Protein interactions for RNA: ENST00000317118.12

PDE4D-202, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-202ENST00000317118 KDM2BQ8NHM5 1336 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 SH3TC1Q8TE82 1336 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 LAMB2P55268 1798 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 HMMRO75330 724 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 CSF1RP07333 972 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 POLA2Q14181 598 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 SMIM5Q71RC9 77 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 CENPQQ7L2Z9 268 aaPredicted RBP7.36□□□□□ -1.23
PDE4D-202ENST00000317118 UBE3BQ7Z3V4 1068 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 SIRT2Q8IXJ6 389 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 SSH3Q8TE77 659 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 FOXO4P98177 505 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 NFIXQ14938 502 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 TPTE2Q6XPS3 522 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 C1orf115Q9H7X2 142 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 NRXN2Q9P2S2 1712 aa7.36□□□□□ -1.23
PDE4D-202ENST00000317118 PDE8AO60658 829 aa7.35□□□□□ -1.23
PDE4D-202ENST00000317118 IGSF3O75054 1194 aa7.35□□□□□ -1.23
PDE4D-202ENST00000317118 BRD2P25440 801 aaKnown RBP7.35□□□□□ -1.23
PDE4D-202ENST00000317118 GCC1Q96CN9 775 aa7.35□□□□□ -1.23
PDE4D-202ENST00000317118 FAM89AQ96GI7 184 aa7.35□□□□□ -1.23
PDE4D-202ENST00000317118 BICC1Q9H694 974 aaKnown RBP7.35□□□□□ -1.23
PDE4D-202ENST00000317118 RTL9Q8NET4 1388 aa7.35□□□□□ -1.23
PDE4D-202ENST00000317118 IRS4O14654 1257 aaPredicted RBP7.35□□□□□ -1.23
PDE4D-202ENST00000317118 IGHDP01880 384 aa7.35□□□□□ -1.23
PDE4D-202ENST00000317118 CDK11BP21127 795 aaKnown RBP7.35□□□□□ -1.23
PDE4D-202ENST00000317118 ILDR2Q71H61 639 aa7.35□□□□□ -1.23
PDE4D-202ENST00000317118 SMC5Q8IY18 1101 aa7.35□□□□□ -1.23
PDE4D-202ENST00000317118 DCTPP1Q9H773 170 aa7.35□□□□□ -1.23
PDE4D-202ENST00000317118 POLRMTO00411 1230 aaKnown RBP7.34□□□□□ -1.23
PDE4D-202ENST00000317118 TAF7LQ5H9L4 462 aa7.34□□□□□ -1.23
PDE4D-202ENST00000317118 EPHA10Q5JZY3 1008 aa7.34□□□□□ -1.23
PDE4D-202ENST00000317118 B4GALNT3Q6L9W6 998 aa7.34□□□□□ -1.23
PDE4D-202ENST00000317118 NBPF5PQ86XG9 351 aaPredicted RBP7.34□□□□□ -1.23
PDE4D-202ENST00000317118 NOP58Q9Y2X3 529 aaKnown RBP7.34□□□□□ -1.23
PDE4D-202ENST00000317118 DDX60Q8IY21 1712 aaKnown RBP7.34□□□□□ -1.23
PDE4D-202ENST00000317118 CASZ1Q86V15 1759 aa7.34□□□□□ -1.23
PDE4D-202ENST00000317118 PNMA6EA0A0J9YXQ4 647 aa7.34□□□□□ -1.23
PDE4D-202ENST00000317118 CTSWP56202 376 aa7.34□□□□□ -1.23
PDE4D-202ENST00000317118 SF3B3Q15393 1217 aaKnown RBP7.34□□□□□ -1.23
PDE4D-202ENST00000317118 SRGAP3O43295 1099 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 SERPINB2P05120 415 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 RFX5P48382 616 aaPredicted RBP7.33□□□□□ -1.24
PDE4D-202ENST00000317118 ERFEQ4G0M1 354 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 LMBR1LQ6UX01 489 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 TTLL11Q8NHH1 800 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 COPRSQ9NQ92 184 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 KLRG2A4D1S0 409 aaPredicted RBP7.33□□□□□ -1.24
PDE4D-202ENST00000317118 RAB11FIP3O75154 756 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 DDR1Q08345 913 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 HSP90AB4PQ58FF6 505 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 PRR5LQ6MZQ0 368 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 BICDL1Q6ZP65 573 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 CNBD1Q8NA66 436 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 JARID2Q92833 1246 aaPredicted RBP7.33□□□□□ -1.24
PDE4D-202ENST00000317118 PARP3Q9Y6F1 533 aa7.33□□□□□ -1.24
PDE4D-202ENST00000317118 GTF2E1P29083 439 aaPredicted RBP7.32□□□□□ -1.24
PDE4D-202ENST00000317118 ST5P78524 1137 aa7.32□□□□□ -1.24
PDE4D-202ENST00000317118 CCDC152Q4G0S7 254 aa7.32□□□□□ -1.24
PDE4D-202ENST00000317118 SYNE4Q8N205 404 aa7.32□□□□□ -1.24
PDE4D-202ENST00000317118 NLRP3Q96P20 1036 aa7.32□□□□□ -1.24
PDE4D-202ENST00000317118 ABCC12Q96J65 1359 aa7.32□□□□□ -1.24
PDE4D-202ENST00000317118 PTPN12Q05209 780 aaKnown RBP7.32□□□□□ -1.24
PDE4D-202ENST00000317118 RTL5Q5HYW3 569 aaPredicted RBP7.32□□□□□ -1.24
PDE4D-202ENST00000317118 NUTM1Q86Y26 1132 aa7.32□□□□□ -1.24
PDE4D-202ENST00000317118 PDZRN3Q9UPQ7 1066 aa7.32□□□□□ -1.24
PDE4D-202ENST00000317118 MYH3P11055 1940 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 CIAO1O76071 339 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 MMP10P09238 476 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 HCLS1P14317 486 aaPredicted RBP7.31□□□□□ -1.24
PDE4D-202ENST00000317118 CCDC57Q2TAC2 916 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 CRY2Q49AN0 593 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 ERC1Q8IUD2 1116 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 BRIP1Q9BX63 1249 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 MTFR1LQ9H019 292 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 LRP5O75197 1615 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 ANKRD18BA2A2Z9 1011 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 FAM177BA6PVY3 158 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 NUCB1Q02818 461 aa7.31□□□□□ -1.24
PDE4D-202ENST00000317118 IFIT5Q13325 482 aaKnown RBP7.31□□□□□ -1.24
PDE4D-202ENST00000317118 GREM2Q9H772 168 aa7.3□□□□□ -1.24
PDE4D-202ENST00000317118 SURF6O75683 361 aaKnown RBP7.3□□□□□ -1.24
PDE4D-202ENST00000317118 ITGA6P23229 1130 aa7.3□□□□□ -1.24
PDE4D-202ENST00000317118 HOXA10P31260 410 aaPredicted RBP7.3□□□□□ -1.24
PDE4D-202ENST00000317118 PDE6BP35913 854 aa7.3□□□□□ -1.24
PDE4D-202ENST00000317118 G3BP1Q13283 466 aaKnown RBP eCLIP7.3□□□□□ -1.24
PDE4D-202ENST00000317118 FAM161AQ3B820 660 aa7.3□□□□□ -1.24
PDE4D-202ENST00000317118 KIF1BPQ96EK5 621 aa7.3□□□□□ -1.24
PDE4D-202ENST00000317118 TNRC6CQ9HCJ0 1690 aaKnown RBP7.3□□□□□ -1.24
PDE4D-202ENST00000317118 EYA2O00167 538 aa7.29□□□□□ -1.24
PDE4D-202ENST00000317118 NPHP1O15259 732 aa7.29□□□□□ -1.24
PDE4D-202ENST00000317118 IL15P40933 162 aaPredicted RBP7.29□□□□□ -1.24
PDE4D-202ENST00000317118 R3HDM1Q15032 1099 aaKnown RBP7.29□□□□□ -1.24
PDE4D-202ENST00000317118 CHD1LQ86WJ1 897 aa7.29□□□□□ -1.24
PDE4D-202ENST00000317118 CDC5LQ99459 802 aaKnown RBP7.29□□□□□ -1.24
PDE4D-202ENST00000317118 LRRCC1Q9C099 1032 aa7.29□□□□□ -1.24
PDE4D-202ENST00000317118 PDGFDQ9GZP0 370 aaPredicted RBP7.29□□□□□ -1.24
PDE4D-202ENST00000317118 GPR108Q9NPR9 543 aa7.29□□□□□ -1.24
PDE4D-202ENST00000317118 C10orf71Q711Q0 1435 aa7.29□□□□□ -1.24
PDE4D-202ENST00000317118 MSL1Q68DK7 614 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms