RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SNX21Q969T3 373 aa9.17□□□□□ -0.94
TRIM55-202ENST00000315962 GREM2Q9H772 168 aa9.17□□□□□ -0.94
TRIM55-202ENST00000315962 HDAC5Q9UQL6 1122 aa9.17□□□□□ -0.94
TRIM55-202ENST00000315962 NMIQ13287 307 aaPredicted RBP9.17□□□□□ -0.94
TRIM55-202ENST00000315962 ADCK5Q3MIX3 580 aa9.17□□□□□ -0.94
TRIM55-202ENST00000315962 ATG9AQ7Z3C6 839 aa9.17□□□□□ -0.94
TRIM55-202ENST00000315962 ZNF589Q86UQ0 364 aaPredicted RBP9.17□□□□□ -0.94
TRIM55-202ENST00000315962 GPATCH3Q96I76 525 aa9.17□□□□□ -0.94
TRIM55-202ENST00000315962 R3HCC1Q9Y3T6 440 aaKnown RBP9.17□□□□□ -0.94
TRIM55-202ENST00000315962 GOLIM4O00461 696 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 SGSM2O43147 1006 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 ADORA1P30542 326 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 RABEP1Q15276 862 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 MEX3CQ5U5Q3 659 aaKnown RBP9.16□□□□□ -0.94
TRIM55-202ENST00000315962 RBSNQ9H1K0 784 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 COPRSQ9NQ92 184 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 USP21Q9UK80 565 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 BCL9O00512 1426 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 SPATA31A5Q5VU36 1347 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 SPATA31A7Q8IWB4 1347 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 KCPQ6ZWJ8 1503 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 WTIPA6NIX2 430 aaPredicted RBP9.16□□□□□ -0.94
TRIM55-202ENST00000315962 PPFIA3O75145 1194 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 RABL6Q3YEC7 729 aaPredicted RBP9.16□□□□□ -0.94
TRIM55-202ENST00000315962 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 FAM13BQ9NYF5 915 aa9.16□□□□□ -0.94
TRIM55-202ENST00000315962 GOLGA6L22H0YM25 854 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 ST18O60284 1047 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 GORABQ5T7V8 394 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 GIGYF2Q6Y7W6 1299 aaKnown RBP9.15□□□□□ -0.94
TRIM55-202ENST00000315962 NLRP10Q86W26 655 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 UBN2Q6ZU65 1347 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 A0A1B0GUL7 405 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 SYCE3A1L190 88 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 IRS4O14654 1257 aaPredicted RBP9.15□□□□□ -0.94
TRIM55-202ENST00000315962 ITGA6P23229 1130 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 MSNP26038 577 aaKnown RBP9.15□□□□□ -0.94
TRIM55-202ENST00000315962 ZSCAN23Q3MJ62 389 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 INTS5Q6P9B9 1019 aaKnown RBP9.15□□□□□ -0.94
TRIM55-202ENST00000315962 LDHAL6AQ6ZMR3 332 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 MRC1P22897 1456 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 MAP3K15Q6ZN16 1313 aa9.15□□□□□ -0.94
TRIM55-202ENST00000315962 SIPA1L3O60292 1781 aaPredicted RBP9.15□□□□□ -0.95
TRIM55-202ENST00000315962 TAF5LO75529 589 aa9.15□□□□□ -0.95
TRIM55-202ENST00000315962 PHF14O94880 888 aa9.15□□□□□ -0.95
TRIM55-202ENST00000315962 CASTP20810 708 aaKnown RBP9.15□□□□□ -0.95
TRIM55-202ENST00000315962 HSPA1LP34931 641 aa9.15□□□□□ -0.95
TRIM55-202ENST00000315962 IFIT5Q13325 482 aaKnown RBP9.15□□□□□ -0.95
TRIM55-202ENST00000315962 EVI5LQ96CN4 794 aa9.15□□□□□ -0.95
TRIM55-202ENST00000315962 ISCA1Q9BUE6 129 aa9.15□□□□□ -0.95
TRIM55-202ENST00000315962 SEC31BQ9NQW1 1179 aa9.15□□□□□ -0.95
TRIM55-202ENST00000315962 TTC41PQ6P2S7 1318 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 SUSD4Q5VX71 490 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 ANP32BQ92688 251 aaKnown RBP9.14□□□□□ -0.95
TRIM55-202ENST00000315962 TMX3Q96JJ7 454 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 LSG1Q9H089 658 aaKnown RBP9.14□□□□□ -0.95
TRIM55-202ENST00000315962 TAOK2Q9UL54 1235 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 LTBP4Q8N2S1 1624 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 A0A0G2JLW4 131 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 MCCP23508 829 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 SCARF1Q14162 830 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 AMIGO3Q86WK7 504 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 ZBTB38Q8NAP3 1195 aaPredicted RBP9.14□□□□□ -0.95
TRIM55-202ENST00000315962 GPT2Q8TD30 523 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 TEX13AQ9BXU3 409 aaPredicted RBP9.14□□□□□ -0.95
TRIM55-202ENST00000315962 CNNM1Q9NRU3 951 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 NIP7Q9Y221 180 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRIM55-202ENST00000315962 SNX14Q9Y5W7 946 aa9.14□□□□□ -0.95
TRIM55-202ENST00000315962 EYA2O00167 538 aa9.13□□□□□ -0.95
TRIM55-202ENST00000315962 TTLL11Q8NHH1 800 aa9.13□□□□□ -0.95
TRIM55-202ENST00000315962 JAKMIP1Q96N16 626 aaKnown RBP9.13□□□□□ -0.95
TRIM55-202ENST00000315962 CEP126Q9P2H0 1117 aa9.13□□□□□ -0.95
TRIM55-202ENST00000315962 IQSEC3Q9UPP2 1182 aaPredicted RBP9.13□□□□□ -0.95
TRIM55-202ENST00000315962 NHSL1Q5SYE7 1610 aa9.13□□□□□ -0.95
TRIM55-202ENST00000315962 GLIPR1L2Q4G1C9 344 aa9.13□□□□□ -0.95
TRIM55-202ENST00000315962 VPS53Q5VIR6 699 aa9.13□□□□□ -0.95
TRIM55-202ENST00000315962 CCDC87Q9NVE4 849 aa9.13□□□□□ -0.95
TRIM55-202ENST00000315962 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
TRIM55-202ENST00000315962 PALLDQ8WX93 1383 aa9.13□□□□□ -0.95
TRIM55-202ENST00000315962 DISP2A7MBM2 1401 aa9.13□□□□□ -0.95
TRIM55-202ENST00000315962 ADAMTS7Q9UKP4 1686 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 PKD1L3Q7Z443 1732 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 HSPA4P34932 840 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 METTL24Q5JXM2 366 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 TSC1Q92574 1164 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 LRRC2Q9BYS8 371 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 LMBRD1Q9NUN5 540 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 TNS2Q63HR2 1409 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 CACNA1FO60840 1977 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 RRP9O43818 475 aaKnown RBP9.12□□□□□ -0.95
TRIM55-202ENST00000315962 CCDC173Q0VFZ6 552 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 KLHL40Q2TBA0 621 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 SKOR2Q2VWA4 1001 aaPredicted RBP9.12□□□□□ -0.95
TRIM55-202ENST00000315962 SLC51AQ86UW1 340 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 ZSCAN30Q86W11 494 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 TMEM63CQ9P1W3 806 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 SRP68Q9UHB9 627 aaKnown RBP9.12□□□□□ -0.95
TRIM55-202ENST00000315962 ZDHHC9Q9Y397 364 aa9.12□□□□□ -0.95
TRIM55-202ENST00000315962 RBM8AQ9Y5S9 174 aaKnown RBP9.12□□□□□ -0.95
TRIM55-202ENST00000315962 ABCA3Q99758 1704 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms