RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CTIFO43310 598 aaKnown RBP9.63□□□□□ -0.87
CNOT4-201ENST00000315544 TSHZ3Q63HK5 1081 aa9.63□□□□□ -0.87
CNOT4-201ENST00000315544 VGLL2Q8N8G2 317 aa9.63□□□□□ -0.87
CNOT4-201ENST00000315544 PRDM11Q9NQV5 511 aa9.63□□□□□ -0.87
CNOT4-201ENST00000315544 SH3TC1Q8TE82 1336 aa9.63□□□□□ -0.87
CNOT4-201ENST00000315544 EXOSC10Q01780 885 aaKnown RBP9.63□□□□□ -0.87
CNOT4-201ENST00000315544 NAV1Q8NEY1 1877 aa9.62□□□□□ -0.87
CNOT4-201ENST00000315544 PRKCSHP14314 528 aaPredicted RBP9.62□□□□□ -0.87
CNOT4-201ENST00000315544 LRRC4BQ9NT99 713 aa9.62□□□□□ -0.87
CNOT4-201ENST00000315544 BAZ2AQ9UIF9 1905 aaKnown RBP9.62□□□□□ -0.87
CNOT4-201ENST00000315544 FAM237AA0A1B0GTK4 181 aa9.62□□□□□ -0.87
CNOT4-201ENST00000315544 SRCIN1Q9C0H9 1055 aa9.62□□□□□ -0.87
CNOT4-201ENST00000315544 TLR7Q9NYK1 1049 aaKnown RBP9.62□□□□□ -0.87
CNOT4-201ENST00000315544 LRRFIP2Q9Y608 721 aaKnown RBP9.62□□□□□ -0.87
CNOT4-201ENST00000315544 RAB11FIP3O75154 756 aa9.62□□□□□ -0.87
CNOT4-201ENST00000315544 PNPLA7Q6ZV29 1317 aa9.61□□□□□ -0.87
CNOT4-201ENST00000315544 SNW1Q13573 536 aaKnown RBP9.61□□□□□ -0.87
CNOT4-201ENST00000315544 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
CNOT4-201ENST00000315544 ENGASEQ8NFI3 743 aa9.61□□□□□ -0.87
CNOT4-201ENST00000315544 STOX1Q6ZVD7 989 aa9.61□□□□□ -0.87
CNOT4-201ENST00000315544 RHPN1Q8TCX5 695 aa9.61□□□□□ -0.87
CNOT4-201ENST00000315544 SHISA4Q96DD7 197 aa9.61□□□□□ -0.87
CNOT4-201ENST00000315544 SLX4Q8IY92 1834 aa9.61□□□□□ -0.87
CNOT4-201ENST00000315544 ESPNB1AK53 854 aa9.61□□□□□ -0.87
CNOT4-201ENST00000315544 PTPN12Q05209 780 aaKnown RBP9.61□□□□□ -0.87
CNOT4-201ENST00000315544 SKOR2Q2VWA4 1001 aaPredicted RBP9.61□□□□□ -0.87
CNOT4-201ENST00000315544 GNAI2P04899 355 aa9.6□□□□□ -0.87
CNOT4-201ENST00000315544 CHGBP05060 677 aa9.6□□□□□ -0.87
CNOT4-201ENST00000315544 MORC2Q9Y6X9 1032 aaPredicted RBP9.6□□□□□ -0.87
CNOT4-201ENST00000315544 EAF2Q96CJ1 260 aaPredicted RBP9.6□□□□□ -0.87
CNOT4-201ENST00000315544 COPRSQ9NQ92 184 aa9.6□□□□□ -0.87
CNOT4-201ENST00000315544 NBPF26B4DH59 902 aa9.6□□□□□ -0.87
CNOT4-201ENST00000315544 AMOTQ4VCS5 1084 aa9.6□□□□□ -0.87
CNOT4-201ENST00000315544 NBPF14Q5TI25 921 aa9.6□□□□□ -0.87
CNOT4-201ENST00000315544 NBPF10Q6P3W6 841 aaKnown RBP9.6□□□□□ -0.87
CNOT4-201ENST00000315544 NBPF15Q8N660 670 aa9.6□□□□□ -0.87
CNOT4-201ENST00000315544 CHPF2Q9P2E5 772 aa9.6□□□□□ -0.87
CNOT4-201ENST00000315544 ABCC12Q96J65 1359 aa9.59□□□□□ -0.87
CNOT4-201ENST00000315544 ALDH1L1O75891 902 aa9.59□□□□□ -0.87
CNOT4-201ENST00000315544 ADAMTS2O95450 1211 aa9.59□□□□□ -0.87
CNOT4-201ENST00000315544 FAM98CQ17RN3 349 aaKnown RBP9.59□□□□□ -0.87
CNOT4-201ENST00000315544 CHMP4BQ9H444 224 aaKnown RBP9.59□□□□□ -0.87
CNOT4-201ENST00000315544 L1TD1Q5T7N2 865 aaKnown RBP9.59□□□□□ -0.87
CNOT4-201ENST00000315544 PPP1R42Q7Z4L9 355 aa9.59□□□□□ -0.87
CNOT4-201ENST00000315544 PLA2G4DQ86XP0 818 aa9.59□□□□□ -0.87
CNOT4-201ENST00000315544 TPCN1Q9ULQ1 816 aa9.59□□□□□ -0.87
CNOT4-201ENST00000315544 KLRG2A4D1S0 409 aaPredicted RBP9.59□□□□□ -0.87
CNOT4-201ENST00000315544 VPS53Q5VIR6 699 aa9.59□□□□□ -0.87
CNOT4-201ENST00000315544 SUCLG2Q96I99 432 aa9.59□□□□□ -0.87
CNOT4-201ENST00000315544 LRRCC1Q9C099 1032 aa9.59□□□□□ -0.87
CNOT4-201ENST00000315544 USP16Q9Y5T5 823 aa9.59□□□□□ -0.87
CNOT4-201ENST00000315544 ME3Q16798 604 aa9.58□□□□□ -0.88
CNOT4-201ENST00000315544 ZNF589Q86UQ0 364 aaPredicted RBP9.58□□□□□ -0.88
CNOT4-201ENST00000315544 RBM27Q9P2N5 1060 aaKnown RBP9.58□□□□□ -0.88
CNOT4-201ENST00000315544 CCDC173Q0VFZ6 552 aa9.58□□□□□ -0.88
CNOT4-201ENST00000315544 ANKRD7Q92527 254 aa9.58□□□□□ -0.88
CNOT4-201ENST00000315544 EXOC6BQ9Y2D4 811 aa9.58□□□□□ -0.88
CNOT4-201ENST00000315544 NUTM2FA1L443 756 aa9.58□□□□□ -0.88
CNOT4-201ENST00000315544 H7C1W4 665 aa9.58□□□□□ -0.88
CNOT4-201ENST00000315544 TRPM7Q96QT4 1865 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 A0A0G2JLW4 131 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 NEURL1BA8MQ27 555 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 ELL2O00472 640 aaPredicted RBP9.57□□□□□ -0.88
CNOT4-201ENST00000315544 AK2P54819 239 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 AMIGO3Q86WK7 504 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 COL4A5P29400 1685 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 GOLGA6L3A6NEY3 463 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 ZNF827Q17R98 1081 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 PGBD1Q96JS3 809 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 TAF5LO75529 589 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 ZC3H6P61129 1189 aaKnown RBP9.57□□□□□ -0.88
CNOT4-201ENST00000315544 UBXN6Q9BZV1 441 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 ATG3Q9NT62 314 aa9.57□□□□□ -0.88
CNOT4-201ENST00000315544 WDR81Q562E7 1941 aa9.56□□□□□ -0.88
CNOT4-201ENST00000315544 RESTQ13127 1097 aa9.56□□□□□ -0.88
CNOT4-201ENST00000315544 IQCB1Q15051 598 aa9.56□□□□□ -0.88
CNOT4-201ENST00000315544 CCDC30Q5VVM6 783 aa9.56□□□□□ -0.88
CNOT4-201ENST00000315544 DCAF5Q96JK2 942 aa9.56□□□□□ -0.88
CNOT4-201ENST00000315544 PLA2G12BQ9BX93 195 aa9.56□□□□□ -0.88
CNOT4-201ENST00000315544 ZKSCAN5Q9Y2L8 839 aa9.56□□□□□ -0.88
CNOT4-201ENST00000315544 A0A0D9SFI3 127 aa9.56□□□□□ -0.88
CNOT4-201ENST00000315544 ADRA2BP18089 450 aa9.56□□□□□ -0.88
CNOT4-201ENST00000315544 BPTFQ12830 3046 aa9.55□□□□□ -0.88
CNOT4-201ENST00000315544 FDPSP14324 419 aaKnown RBP9.55□□□□□ -0.88
CNOT4-201ENST00000315544 MCM5P33992 734 aa9.55□□□□□ -0.88
CNOT4-201ENST00000315544 NBPF11Q86T75 865 aa9.55□□□□□ -0.88
CNOT4-201ENST00000315544 ZCRB1Q8TBF4 217 aaKnown RBP9.55□□□□□ -0.88
CNOT4-201ENST00000315544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.55□□□□□ -0.88
CNOT4-201ENST00000315544 KSR2Q6VAB6 950 aa9.55□□□□□ -0.88
CNOT4-201ENST00000315544 NUTM2BA6NNL0 878 aaPredicted RBP9.55□□□□□ -0.88
CNOT4-201ENST00000315544 NUTM2EB1AL46 878 aaPredicted RBP9.55□□□□□ -0.88
CNOT4-201ENST00000315544 SYT1P21579 422 aa9.55□□□□□ -0.88
CNOT4-201ENST00000315544 NUCB2P80303 420 aa9.55□□□□□ -0.88
CNOT4-201ENST00000315544 FKBP5Q13451 457 aaPredicted RBP9.55□□□□□ -0.88
CNOT4-201ENST00000315544 INTS5Q6P9B9 1019 aaKnown RBP9.55□□□□□ -0.88
CNOT4-201ENST00000315544 NUTM2AQ8IVF1 878 aaPredicted RBP9.55□□□□□ -0.88
CNOT4-201ENST00000315544 SLC52A2Q9HAB3 445 aa9.55□□□□□ -0.88
CNOT4-201ENST00000315544 HPS5Q9UPZ3 1129 aa9.55□□□□□ -0.88
CNOT4-201ENST00000315544 ZNFX1Q9P2E3 1918 aaKnown RBP9.55□□□□□ -0.88
CNOT4-201ENST00000315544 HCLS1P14317 486 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms