RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 C8orf58Q8NAV2 365 aa7.48□□□□□ -1.21
EXD1-201ENST00000314992 PDLIM2Q96JY6 352 aa7.48□□□□□ -1.21
EXD1-201ENST00000314992 PAPPA2Q9BXP8 1791 aa7.48□□□□□ -1.21
EXD1-201ENST00000314992 HSP90AA1P07900 732 aaKnown RBP7.48□□□□□ -1.21
EXD1-201ENST00000314992 MCM5P33992 734 aa7.48□□□□□ -1.21
EXD1-201ENST00000314992 TM4SF1P30408 202 aa7.48□□□□□ -1.21
EXD1-201ENST00000314992 CEP85Q6P2H3 762 aa7.48□□□□□ -1.21
EXD1-201ENST00000314992 SPRYD3Q8NCJ5 442 aa7.48□□□□□ -1.21
EXD1-201ENST00000314992 COLQQ9Y215 455 aaPredicted RBP7.48□□□□□ -1.21
EXD1-201ENST00000314992 CACNA1FO60840 1977 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 LAMB1P07942 1786 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 REC8O95072 547 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 ANAPC15P60006 121 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 CASC1Q6TDU7 716 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 ZCRB1Q8TBF4 217 aaKnown RBP7.47□□□□□ -1.21
EXD1-201ENST00000314992 COG3Q96JB2 828 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 GZF1Q9H116 711 aaPredicted RBP7.47□□□□□ -1.21
EXD1-201ENST00000314992 LMBRD1Q9NUN5 540 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 TTC21BQ7Z4L5 1316 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 HTATSF1O43719 755 aaKnown RBP7.47□□□□□ -1.21
EXD1-201ENST00000314992 FGD1P98174 961 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 SAFB2Q14151 953 aaKnown RBP eCLIP7.47□□□□□ -1.21
EXD1-201ENST00000314992 ZSCAN30Q86W11 494 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 BABAM1Q9NWV8 329 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 AOX1Q06278 1338 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 SALL3Q9BXA9 1300 aa7.47□□□□□ -1.21
EXD1-201ENST00000314992 CUL4AQ13619 759 aa7.46□□□□□ -1.21
EXD1-201ENST00000314992 CST9Q5W186 159 aa7.46□□□□□ -1.21
EXD1-201ENST00000314992 INTS4Q96HW7 963 aaKnown RBP7.46□□□□□ -1.21
EXD1-201ENST00000314992 EMILIN1Q9Y6C2 1016 aa7.46□□□□□ -1.21
EXD1-201ENST00000314992 ANKRD31Q8N7Z5 1873 aa7.46□□□□□ -1.22
EXD1-201ENST00000314992 COL11A2P13942 1736 aaPredicted RBP7.46□□□□□ -1.22
EXD1-201ENST00000314992 ST18O60284 1047 aa7.46□□□□□ -1.22
EXD1-201ENST00000314992 HMMRO75330 724 aa7.46□□□□□ -1.22
EXD1-201ENST00000314992 OFD1O75665 1012 aa7.46□□□□□ -1.22
EXD1-201ENST00000314992 CYP4F22Q6NT55 531 aa7.46□□□□□ -1.22
EXD1-201ENST00000314992 ANKRD24Q8TF21 1146 aa7.46□□□□□ -1.22
EXD1-201ENST00000314992 TRIM44Q96DX7 344 aaPredicted RBP7.46□□□□□ -1.22
EXD1-201ENST00000314992 PGAP2Q9UHJ9 254 aa7.46□□□□□ -1.22
EXD1-201ENST00000314992 HACL1Q9UJ83 578 aa7.46□□□□□ -1.22
EXD1-201ENST00000314992 ZNF500O60304 480 aaPredicted RBP7.45□□□□□ -1.22
EXD1-201ENST00000314992 CCT4P50991 539 aaKnown RBP7.45□□□□□ -1.22
EXD1-201ENST00000314992 MPNDQ8N594 471 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 RGPD2P0DJD1 1756 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 POLRMTO00411 1230 aaKnown RBP7.45□□□□□ -1.22
EXD1-201ENST00000314992 AOC2O75106 756 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 SDSP20132 328 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 NASPP49321 788 aaPredicted RBP7.45□□□□□ -1.22
EXD1-201ENST00000314992 SAPCD2Q86UD0 394 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 CFHR5Q9BXR6 569 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 STAP2Q9UGK3 403 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 AKAP11Q9UKA4 1901 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 ERC2O15083 957 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 DDR1Q08345 913 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 NOGQ13253 232 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 TRAPPC3LQ5T215 181 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 NME9Q86XW9 330 aa7.45□□□□□ -1.22
EXD1-201ENST00000314992 ZNF219Q9P2Y4 722 aaPredicted RBP7.45□□□□□ -1.22
EXD1-201ENST00000314992 ABT1Q9ULW3 272 aaKnown RBP7.45□□□□□ -1.22
EXD1-201ENST00000314992 MBD3O95983 291 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 HMOX1P09601 288 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 AKAP4Q5JQC9 854 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 TTLL6Q8N841 843 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 ANP32BQ92688 251 aaKnown RBP7.44□□□□□ -1.22
EXD1-201ENST00000314992 RBM42Q9BTD8 480 aaKnown RBP7.44□□□□□ -1.22
EXD1-201ENST00000314992 THUMPD2Q9BTF0 503 aaKnown RBP7.44□□□□□ -1.22
EXD1-201ENST00000314992 NLRP2Q9NX02 1062 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 STXBP5LQ9Y2K9 1186 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 DDX49Q9Y6V7 483 aaKnown RBP7.44□□□□□ -1.22
EXD1-201ENST00000314992 KDM3BQ7LBC6 1761 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 RPS6KA4O75676 772 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 EPHX2P34913 555 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.44□□□□□ -1.22
EXD1-201ENST00000314992 SRCIN1Q9C0H9 1055 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 C1orf115Q9H7X2 142 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 PRDM4Q9UKN5 801 aa7.44□□□□□ -1.22
EXD1-201ENST00000314992 NOL7Q9UMY1 257 aaKnown RBP7.44□□□□□ -1.22
EXD1-201ENST00000314992 TJP1Q07157 1748 aa7.43□□□□□ -1.22
EXD1-201ENST00000314992 LOC102724428A0A0B4J2F2 783 aa7.43□□□□□ -1.22
EXD1-201ENST00000314992 DDNO94850 711 aaPredicted RBP7.43□□□□□ -1.22
EXD1-201ENST00000314992 SIK1P57059 783 aa7.43□□□□□ -1.22
EXD1-201ENST00000314992 ITPK1Q13572 414 aa7.43□□□□□ -1.22
EXD1-201ENST00000314992 EIF4A2Q14240 407 aaKnown RBP7.43□□□□□ -1.22
EXD1-201ENST00000314992 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.43□□□□□ -1.22
EXD1-201ENST00000314992 IP6K1Q92551 441 aa7.43□□□□□ -1.22
EXD1-201ENST00000314992 ZDHHC9Q9Y397 364 aa7.43□□□□□ -1.22
EXD1-201ENST00000314992 FAM155AB1AL88 458 aaPredicted RBP7.43□□□□□ -1.22
EXD1-201ENST00000314992 PDE4CQ08493 712 aa7.43□□□□□ -1.22
EXD1-201ENST00000314992 ZSCAN23Q3MJ62 389 aa7.43□□□□□ -1.22
EXD1-201ENST00000314992 FBXO46Q6PJ61 603 aaPredicted RBP7.43□□□□□ -1.22
EXD1-201ENST00000314992 TSKSQ9UJT2 592 aa7.43□□□□□ -1.22
EXD1-201ENST00000314992 BRD1O95696 1058 aa7.42□□□□□ -1.22
EXD1-201ENST00000314992 SOGA3Q5TF21 947 aa7.42□□□□□ -1.22
EXD1-201ENST00000314992 LRSAM1Q6UWE0 723 aa7.42□□□□□ -1.22
EXD1-201ENST00000314992 SMIM5Q71RC9 77 aa7.42□□□□□ -1.22
EXD1-201ENST00000314992 DDX54Q8TDD1 881 aaKnown RBP7.42□□□□□ -1.22
EXD1-201ENST00000314992 ARHGEF1Q92888 912 aaKnown RBP7.42□□□□□ -1.22
EXD1-201ENST00000314992 PCDH11XQ9BZA7 1347 aa7.42□□□□□ -1.22
EXD1-201ENST00000314992 PCDH11YQ9BZA8 1340 aa7.42□□□□□ -1.22
EXD1-201ENST00000314992 CHRNA5P30532 468 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms