RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 GPC2Q8N158 579 aa10.61□□□□□ -0.71
TPM3-203ENST00000312970 PRKRIP1Q9H875 184 aaPredicted RBP10.61□□□□□ -0.71
TPM3-203ENST00000312970 ADAMTSL1Q8N6G6 1762 aa10.61□□□□□ -0.71
TPM3-203ENST00000312970 BBOX1O75936 387 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 HOXB7P09629 217 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 EPHX2P34913 555 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 MKRN4PQ13434 485 aaPredicted RBP10.6□□□□□ -0.71
TPM3-203ENST00000312970 KRT24Q2M2I5 525 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 EAPPQ56P03 285 aaPredicted RBP10.6□□□□□ -0.71
TPM3-203ENST00000312970 HDGFL1Q5TGJ6 251 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 ANKRD13DQ6ZTN6 518 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 NLRP10Q86W26 655 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 LARGE2Q8N3Y3 721 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 AIDAQ96BJ3 306 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 VPS33BQ9H267 617 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 PCDH10Q9P2E7 1040 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 DBF4Q9UBU7 674 aaPredicted RBP10.6□□□□□ -0.71
TPM3-203ENST00000312970 TRMT112Q9UI30 125 aaKnown RBP10.6□□□□□ -0.71
TPM3-203ENST00000312970 CLEC11AQ9Y240 323 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 ATP6V0A2Q9Y487 856 aa10.6□□□□□ -0.71
TPM3-203ENST00000312970 U3KPZ7 1027 aaPredicted RBP10.6□□□□□ -0.71
TPM3-203ENST00000312970 SNED1Q8TER0 1413 aa10.59□□□□□ -0.71
TPM3-203ENST00000312970 ITGBL1O95965 494 aaPredicted RBP10.59□□□□□ -0.71
TPM3-203ENST00000312970 HCLS1P14317 486 aaPredicted RBP10.59□□□□□ -0.71
TPM3-203ENST00000312970 SP8Q8IXZ3 490 aa10.59□□□□□ -0.71
TPM3-203ENST00000312970 PLBD2Q8NHP8 589 aa10.59□□□□□ -0.71
TPM3-203ENST00000312970 CHPF2Q9P2E5 772 aa10.59□□□□□ -0.71
TPM3-203ENST00000312970 GJA3Q9Y6H8 435 aa10.59□□□□□ -0.71
TPM3-203ENST00000312970 HSPA8P11142 646 aaKnown RBP10.58□□□□□ -0.72
TPM3-203ENST00000312970 DUSP27Q5VZP5 1158 aa10.58□□□□□ -0.72
TPM3-203ENST00000312970 DDX46Q7L014 1031 aaKnown RBP10.58□□□□□ -0.72
TPM3-203ENST00000312970 SUPT20HQ8NEM7 779 aa10.58□□□□□ -0.72
TPM3-203ENST00000312970 HYPKQ9NX55 129 aa10.58□□□□□ -0.72
TPM3-203ENST00000312970 ABCC4O15439 1325 aa10.58□□□□□ -0.72
TPM3-203ENST00000312970 SH3TC1Q8TE82 1336 aa10.58□□□□□ -0.72
TPM3-203ENST00000312970 TMEM88BA6NKF7 163 aa10.57□□□□□ -0.72
TPM3-203ENST00000312970 APAF1O14727 1248 aa10.57□□□□□ -0.72
TPM3-203ENST00000312970 PPIP5K2O43314 1243 aa10.57□□□□□ -0.72
TPM3-203ENST00000312970 ZNF853P0CG23 659 aa10.57□□□□□ -0.72
TPM3-203ENST00000312970 LMOD1P29536 600 aaPredicted RBP10.57□□□□□ -0.72
TPM3-203ENST00000312970 RGS19P49795 217 aa10.57□□□□□ -0.72
TPM3-203ENST00000312970 MLLT1Q03111 559 aaPredicted RBP10.57□□□□□ -0.72
TPM3-203ENST00000312970 CALD1Q05682 793 aaKnown RBP10.57□□□□□ -0.72
TPM3-203ENST00000312970 NIM1KQ8IY84 436 aa10.57□□□□□ -0.72
TPM3-203ENST00000312970 CNTROBQ8N137 903 aa10.57□□□□□ -0.72
TPM3-203ENST00000312970 MPNDQ8N594 471 aa10.57□□□□□ -0.72
TPM3-203ENST00000312970 RTFDC1Q9BY42 306 aaPredicted RBP10.57□□□□□ -0.72
TPM3-203ENST00000312970 MBIPQ9NS73 344 aa10.57□□□□□ -0.72
TPM3-203ENST00000312970 PDE4DIPQ5VU43 2346 aa10.57□□□□□ -0.72
TPM3-203ENST00000312970 CCDC85CA6NKD9 419 aa10.56□□□□□ -0.72
TPM3-203ENST00000312970 GNAI1P63096 354 aa10.56□□□□□ -0.72
TPM3-203ENST00000312970 GRAPQ13588 217 aa10.56□□□□□ -0.72
TPM3-203ENST00000312970 AOC3Q16853 763 aa10.56□□□□□ -0.72
TPM3-203ENST00000312970 DPP8Q6V1X1 898 aaPredicted RBP10.56□□□□□ -0.72
TPM3-203ENST00000312970 SLC51AQ86UW1 340 aa10.56□□□□□ -0.72
TPM3-203ENST00000312970 GRAPLQ8TC17 118 aaPredicted RBP10.56□□□□□ -0.72
TPM3-203ENST00000312970 ISCA1Q9BUE6 129 aa10.56□□□□□ -0.72
TPM3-203ENST00000312970 IFT57Q9NWB7 429 aa10.56□□□□□ -0.72
TPM3-203ENST00000312970 PODXL2Q9NZ53 605 aa10.56□□□□□ -0.72
TPM3-203ENST00000312970 ZNRF3Q9ULT6 936 aa10.56□□□□□ -0.72
TPM3-203ENST00000312970 ATP5J2-PTCD1G3V325 749 aa10.55□□□□□ -0.72
TPM3-203ENST00000312970 EPS15P42566 896 aa10.55□□□□□ -0.72
TPM3-203ENST00000312970 TRIM28Q13263 835 aaKnown RBP10.55□□□□□ -0.72
TPM3-203ENST00000312970 DEFB115Q30KQ5 88 aa10.55□□□□□ -0.72
TPM3-203ENST00000312970 MAP1SQ66K74 1059 aaPredicted RBP10.55□□□□□ -0.72
TPM3-203ENST00000312970 TMC4Q7Z404 712 aa10.55□□□□□ -0.72
TPM3-203ENST00000312970 ZNF428Q96B54 188 aa10.55□□□□□ -0.72
TPM3-203ENST00000312970 FAM89AQ96GI7 184 aa10.55□□□□□ -0.72
TPM3-203ENST00000312970 CHMP4AQ9BY43 222 aa10.55□□□□□ -0.72
TPM3-203ENST00000312970 LTBP1Q14766 1721 aa10.55□□□□□ -0.72
TPM3-203ENST00000312970 TRPM7Q96QT4 1865 aa10.55□□□□□ -0.72
TPM3-203ENST00000312970 COL4A5P29400 1685 aa10.54□□□□□ -0.72
TPM3-203ENST00000312970 RASSF10A6NK89 507 aa10.54□□□□□ -0.72
TPM3-203ENST00000312970 ELL2O00472 640 aaPredicted RBP10.54□□□□□ -0.72
TPM3-203ENST00000312970 SCNN1DP51172 638 aa10.54□□□□□ -0.72
TPM3-203ENST00000312970 C1QBPQ07021 282 aaKnown RBP10.54□□□□□ -0.72
TPM3-203ENST00000312970 CXCL9Q07325 125 aa10.54□□□□□ -0.72
TPM3-203ENST00000312970 SF3B3Q15393 1217 aaKnown RBP10.54□□□□□ -0.72
TPM3-203ENST00000312970 USP50Q70EL3 339 aaPredicted RBP10.54□□□□□ -0.72
TPM3-203ENST00000312970 RIC3Q7Z5B4 369 aa10.54□□□□□ -0.72
TPM3-203ENST00000312970 ANKRD36CQ5JPF3 1778 aa10.54□□□□□ -0.72
TPM3-203ENST00000312970 WDR33Q9C0J8 1336 aaKnown RBP10.54□□□□□ -0.72
TPM3-203ENST00000312970 GOLGA2Q08379 1002 aa10.53□□□□□ -0.72
TPM3-203ENST00000312970 KIAA2012Q0VF49 1180 aa10.53□□□□□ -0.72
TPM3-203ENST00000312970 TNIP1Q15025 636 aa10.53□□□□□ -0.72
TPM3-203ENST00000312970 PHAXQ9H814 394 aaKnown RBP10.53□□□□□ -0.72
TPM3-203ENST00000312970 LAMB2P55268 1798 aa10.52□□□□□ -0.72
TPM3-203ENST00000312970 THSD7BQ9C0I4 1608 aa10.52□□□□□ -0.73
TPM3-203ENST00000312970 IRS4O14654 1257 aaPredicted RBP10.52□□□□□ -0.73
TPM3-203ENST00000312970 HSP90B1P14625 803 aaKnown RBP10.52□□□□□ -0.73
TPM3-203ENST00000312970 MAP2K1Q02750 393 aaPredicted RBP10.52□□□□□ -0.73
TPM3-203ENST00000312970 RTL5Q5HYW3 569 aaPredicted RBP10.52□□□□□ -0.73
TPM3-203ENST00000312970 CIAPIN1Q6FI81 312 aa10.52□□□□□ -0.73
TPM3-203ENST00000312970 C8orf58Q8NAV2 365 aa10.52□□□□□ -0.73
TPM3-203ENST00000312970 ADARB2Q9NS39 739 aaKnown RBP10.52□□□□□ -0.73
TPM3-203ENST00000312970 GPRC5DQ9NZD1 345 aa10.52□□□□□ -0.73
TPM3-203ENST00000312970 NSFL1CQ9UNZ2 370 aaKnown RBP10.52□□□□□ -0.73
TPM3-203ENST00000312970 CASP8AP2Q9UKL3 1982 aa10.52□□□□□ -0.73
TPM3-203ENST00000312970 RAD17O75943 681 aa10.51□□□□□ -0.73
TPM3-203ENST00000312970 GMPSP49915 693 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms