RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NEXMIFQ5QGS0 1516 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 ARHGEF40Q8TER5 1519 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 CTAGE9A4FU28 777 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 ZSCAN23Q3MJ62 389 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 SEC63Q9UGP8 760 aaKnown RBP10.13□□□□□ -0.79
COL6A5-202ENST00000312481 RTL9Q8NET4 1388 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 BTBD11A6QL63 1104 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 MCTP2Q6DN12 878 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 UQCRFS1P1P0C7P4 283 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 FCHSD1Q86WN1 690 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 GGNBP2Q9H3C7 697 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.12□□□□□ -0.79
COL6A5-202ENST00000312481 BRPF3Q9ULD4 1205 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 ANKLE2Q86XL3 938 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 CCDC175P0C221 793 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 MYH8P13535 1937 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 MYH11P35749 1972 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 PCP11498 1178 aaKnown RBP10.12□□□□□ -0.79
COL6A5-202ENST00000312481 SPATA24Q86W54 205 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 MPHOSPH8Q99549 860 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 PTPRKQ15262 1439 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 NOL8Q76FK4 1167 aaKnown RBP10.12□□□□□ -0.79
COL6A5-202ENST00000312481 AFAP1Q8N556 730 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 ZNF500O60304 480 aaPredicted RBP10.12□□□□□ -0.79
COL6A5-202ENST00000312481 ATP5DP30049 168 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 CCDC51Q96ER9 411 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 CALR3Q96L12 384 aaKnown RBP10.12□□□□□ -0.79
COL6A5-202ENST00000312481 RASAL2Q9UJF2 1139 aa10.12□□□□□ -0.79
COL6A5-202ENST00000312481 SLU7O95391 586 aaKnown RBP10.11□□□□□ -0.79
COL6A5-202ENST00000312481 TNNT1P13805 278 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 POTEDQ86YR6 584 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 PTPRTO14522 1441 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 NUDT16Q96DE0 195 aaKnown RBP10.11□□□□□ -0.79
COL6A5-202ENST00000312481 KRT86O43790 486 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 EIF2S2P20042 333 aaKnown RBP10.11□□□□□ -0.79
COL6A5-202ENST00000312481 CEP135Q66GS9 1140 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 SELENOOQ9BVL4 669 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 KCNG1Q9UIX4 513 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 ADCY5O95622 1261 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 FLIIQ13045 1269 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 ZNF530Q6P9A1 599 aaPredicted RBP10.11□□□□□ -0.79
COL6A5-202ENST00000312481 RNF214Q8ND24 703 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 ERO1AQ96HE7 468 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 CATIPQ7Z7H3 387 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 GOLGA1Q92805 767 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 CDC5LQ99459 802 aaKnown RBP10.11□□□□□ -0.79
COL6A5-202ENST00000312481 CABP1Q9NZU7 370 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 MLH3Q9UHC1 1453 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 GIMAP7Q8NHV1 300 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 TCP11L1Q9NUJ3 509 aa10.11□□□□□ -0.79
COL6A5-202ENST00000312481 INO80Q9ULG1 1556 aaPredicted RBP10.11□□□□□ -0.79
COL6A5-202ENST00000312481 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.11□□□□□ -0.79
COL6A5-202ENST00000312481 TESK2Q96S53 571 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 HMOX1P09601 288 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 APOBRQ0VD83 1088 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 BCORL1Q5H9F3 1711 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 NCAPD2Q15021 1401 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 ZFYVE16Q7Z3T8 1539 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 SLC4A3P48751 1232 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 C8orf34Q49A92 452 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 ZBTB40Q9NUA8 1239 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 RFX7Q2KHR2 1363 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 NUTM2DQ5VT03 806 aaPredicted RBP10.1□□□□□ -0.79
COL6A5-202ENST00000312481 NUTM2AQ8IVF1 878 aaPredicted RBP10.1□□□□□ -0.79
COL6A5-202ENST00000312481 NEUROD6Q96NK8 337 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 YTHDC2Q9H6S0 1430 aaKnown RBP10.1□□□□□ -0.79
COL6A5-202ENST00000312481 ANKRD18BA2A2Z9 1011 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 EIF5P55010 431 aaKnown RBP10.1□□□□□ -0.79
COL6A5-202ENST00000312481 VWA3BQ502W6 1294 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 MAGEF1Q9HAY2 307 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 CDC42BPGQ6DT37 1551 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 NCOA7Q8NI08 942 aa10.1□□□□□ -0.79
COL6A5-202ENST00000312481 IGHMBP2P38935 993 aaKnown RBP10.09□□□□□ -0.79
COL6A5-202ENST00000312481 AIDAQ96BJ3 306 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 IFIT1P09914 478 aaKnown RBP10.09□□□□□ -0.79
COL6A5-202ENST00000312481 C6orf163Q5TEZ5 329 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 PIBF1Q8WXW3 757 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 MYO1AQ9UBC5 1043 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 CPSF1Q10570 1443 aaKnown RBP10.09□□□□□ -0.79
COL6A5-202ENST00000312481 SBNO1A3KN83 1393 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 GSTO1P78417 241 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 FAM177A1Q8N128 213 aaPredicted RBP10.09□□□□□ -0.79
COL6A5-202ENST00000312481 NUP58Q9BVL2 599 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 DEPDC5O75140 1603 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 ERMNQ8TAM6 284 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 RUBCNQ92622 972 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 MYO10Q9HD67 2058 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 ARHGAP25P42331 645 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 LMTK2Q8IWU2 1503 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 NOLC1Q14978 699 aaKnown RBP eCLIP10.09□□□□□ -0.79
COL6A5-202ENST00000312481 ERBB4Q15303 1308 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 PDE4BQ07343 736 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 HDXQ7Z353 690 aa10.09□□□□□ -0.79
COL6A5-202ENST00000312481 SOX12O15370 315 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 CCDC38Q502W7 563 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 ESYT1Q9BSJ8 1104 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 RBM28Q9NW13 759 aaKnown RBP10.08□□□□□ -0.8
COL6A5-202ENST00000312481 STAMBPO95630 424 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 NAA16Q6N069 864 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms