RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 VEGFBP49765 207 aa10.9□□□□□ -0.66
MSL3-201ENST00000312196 CCDC191Q8NCU4 936 aa10.9□□□□□ -0.66
MSL3-201ENST00000312196 NECTIN2Q92692 538 aa10.9□□□□□ -0.66
MSL3-201ENST00000312196 DDX58O95786 925 aaKnown RBP10.9□□□□□ -0.67
MSL3-201ENST00000312196 GPTP24298 496 aa10.9□□□□□ -0.67
MSL3-201ENST00000312196 NUTM1Q86Y26 1132 aa10.9□□□□□ -0.67
MSL3-201ENST00000312196 NIM1KQ8IY84 436 aa10.9□□□□□ -0.67
MSL3-201ENST00000312196 ADARB2Q9NS39 739 aaKnown RBP10.9□□□□□ -0.67
MSL3-201ENST00000312196 FOXN1O15353 648 aa10.89□□□□□ -0.67
MSL3-201ENST00000312196 PCCAP05165 728 aaPredicted RBP10.89□□□□□ -0.67
MSL3-201ENST00000312196 GOLGA2Q08379 1002 aa10.89□□□□□ -0.67
MSL3-201ENST00000312196 ZNF219Q9P2Y4 722 aaPredicted RBP10.89□□□□□ -0.67
MSL3-201ENST00000312196 TLL2Q9Y6L7 1015 aa10.89□□□□□ -0.67
MSL3-201ENST00000312196 WDR33Q9C0J8 1336 aaKnown RBP10.89□□□□□ -0.67
MSL3-201ENST00000312196 HSPA8P11142 646 aaKnown RBP10.89□□□□□ -0.67
MSL3-201ENST00000312196 TNIP1Q15025 636 aa10.89□□□□□ -0.67
MSL3-201ENST00000312196 DDX46Q7L014 1031 aaKnown RBP10.89□□□□□ -0.67
MSL3-201ENST00000312196 ZBTB38Q8NAP3 1195 aaPredicted RBP10.89□□□□□ -0.67
MSL3-201ENST00000312196 TRMT112Q9UI30 125 aaKnown RBP10.89□□□□□ -0.67
MSL3-201ENST00000312196 ZNRF3Q9ULT6 936 aa10.89□□□□□ -0.67
MSL3-201ENST00000312196 TRPM7Q96QT4 1865 aa10.88□□□□□ -0.67
MSL3-201ENST00000312196 METTL22Q9BUU2 404 aaPredicted RBP10.88□□□□□ -0.67
MSL3-201ENST00000312196 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 POTEJP0CG39 1038 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 RGS19P49795 217 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 SCNN1DP51172 638 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 KIAA2012Q0VF49 1180 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 C3orf67Q6ZVT6 689 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 WWC1Q8IX03 1113 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 LARGE2Q8N3Y3 721 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 PODXL2Q9NZ53 605 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 MKRN1Q9UHC7 482 aaKnown RBP10.87□□□□□ -0.67
MSL3-201ENST00000312196 COL4A5P29400 1685 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 DUOX1Q9NRD9 1551 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 ANP32CO43423 234 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 MMP14P50281 582 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 DPF2Q92785 391 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 GPRC5DQ9NZD1 345 aa10.87□□□□□ -0.67
MSL3-201ENST00000312196 RPS12P25398 132 aaKnown RBP10.86□□□□□ -0.67
MSL3-201ENST00000312196 NEUROD2Q15784 382 aa10.86□□□□□ -0.67
MSL3-201ENST00000312196 REM2Q8IYK8 340 aaPredicted RBP10.86□□□□□ -0.67
MSL3-201ENST00000312196 MPNDQ8N594 471 aa10.86□□□□□ -0.67
MSL3-201ENST00000312196 CLEC11AQ9Y240 323 aa10.86□□□□□ -0.67
MSL3-201ENST00000312196 FAM177BA6PVY3 158 aa10.86□□□□□ -0.67
MSL3-201ENST00000312196 KRT24Q2M2I5 525 aa10.86□□□□□ -0.67
MSL3-201ENST00000312196 KSR2Q6VAB6 950 aa10.86□□□□□ -0.67
MSL3-201ENST00000312196 PLA2G12BQ9BX93 195 aa10.86□□□□□ -0.67
MSL3-201ENST00000312196 LAS1LQ9Y4W2 734 aaKnown RBP10.86□□□□□ -0.67
MSL3-201ENST00000312196 EAPPQ56P03 285 aaPredicted RBP10.85□□□□□ -0.67
MSL3-201ENST00000312196 C8orf58Q8NAV2 365 aa10.85□□□□□ -0.67
MSL3-201ENST00000312196 PSME4Q14997 1843 aa10.85□□□□□ -0.67
MSL3-201ENST00000312196 ANXA1P04083 346 aa10.85□□□□□ -0.67
MSL3-201ENST00000312196 AIMP1Q12904 312 aaKnown RBP10.85□□□□□ -0.67
MSL3-201ENST00000312196 RIC3Q7Z5B4 369 aa10.85□□□□□ -0.67
MSL3-201ENST00000312196 EYA3Q99504 573 aa10.85□□□□□ -0.67
MSL3-201ENST00000312196 CWC25Q9NXE8 425 aaPredicted RBP10.85□□□□□ -0.67
MSL3-201ENST00000312196 PDE8AO60658 829 aa10.84□□□□□ -0.67
MSL3-201ENST00000312196 BRPF1P55201 1214 aaPredicted RBP10.84□□□□□ -0.67
MSL3-201ENST00000312196 CIAPIN1Q6FI81 312 aa10.84□□□□□ -0.67
MSL3-201ENST00000312196 DPP8Q6V1X1 898 aaPredicted RBP10.84□□□□□ -0.67
MSL3-201ENST00000312196 IRS4O14654 1257 aaPredicted RBP10.84□□□□□ -0.67
MSL3-201ENST00000312196 PPIP5K2O43314 1243 aa10.84□□□□□ -0.67
MSL3-201ENST00000312196 CAPNS2Q96L46 248 aa10.84□□□□□ -0.67
MSL3-201ENST00000312196 MYH3P11055 1940 aa10.83□□□□□ -0.68
MSL3-201ENST00000312196 CXCL9Q07325 125 aa10.83□□□□□ -0.68
MSL3-201ENST00000312196 CCDC152Q4G0S7 254 aa10.83□□□□□ -0.68
MSL3-201ENST00000312196 STK31Q9BXU1 1019 aa10.83□□□□□ -0.68
MSL3-201ENST00000312196 SAGE1Q9NXZ1 904 aa10.83□□□□□ -0.68
MSL3-201ENST00000312196 H7C1W4 665 aa10.83□□□□□ -0.68
MSL3-201ENST00000312196 HCLS1P14317 486 aaPredicted RBP10.83□□□□□ -0.68
MSL3-201ENST00000312196 RPS8P62241 208 aaKnown RBP10.83□□□□□ -0.68
MSL3-201ENST00000312196 MAP1SQ66K74 1059 aaPredicted RBP10.83□□□□□ -0.68
MSL3-201ENST00000312196 CDC37L1Q7L3B6 337 aa10.83□□□□□ -0.68
MSL3-201ENST00000312196 EPS15P42566 896 aa10.82□□□□□ -0.68
MSL3-201ENST00000312196 OLFM4Q6UX06 510 aa10.82□□□□□ -0.68
MSL3-201ENST00000312196 BEGAINQ9BUH8 593 aa10.82□□□□□ -0.68
MSL3-201ENST00000312196 TWISTNBQ3B726 338 aaPredicted RBP10.81□□□□□ -0.68
MSL3-201ENST00000312196 CST9Q5W186 159 aa10.81□□□□□ -0.68
MSL3-201ENST00000312196 MRS2Q9HD23 443 aa10.81□□□□□ -0.68
MSL3-201ENST00000312196 GJA3Q9Y6H8 435 aa10.81□□□□□ -0.68
MSL3-201ENST00000312196 LBX1P52954 281 aa10.81□□□□□ -0.68
MSL3-201ENST00000312196 NEXNQ0ZGT2 675 aa10.81□□□□□ -0.68
MSL3-201ENST00000312196 CCDC184Q52MB2 194 aa10.81□□□□□ -0.68
MSL3-201ENST00000312196 MYH16Q9H6N6 1097 aa10.81□□□□□ -0.68
MSL3-201ENST00000312196 PHAXQ9H814 394 aaKnown RBP10.81□□□□□ -0.68
MSL3-201ENST00000312196 ABT1Q9ULW3 272 aaKnown RBP10.81□□□□□ -0.68
MSL3-201ENST00000312196 H7C1D1 291 aa10.8□□□□□ -0.68
MSL3-201ENST00000312196 ATP2B4P23634 1241 aa10.8□□□□□ -0.68
MSL3-201ENST00000312196 SAPCD2Q86UD0 394 aa10.8□□□□□ -0.68
MSL3-201ENST00000312196 ZNF428Q96B54 188 aa10.8□□□□□ -0.68
MSL3-201ENST00000312196 ABHD8Q96I13 439 aa10.8□□□□□ -0.68
MSL3-201ENST00000312196 GPR101Q96P66 508 aaPredicted RBP10.8□□□□□ -0.68
MSL3-201ENST00000312196 MYD88Q99836 296 aa10.8□□□□□ -0.68
MSL3-201ENST00000312196 ZNF521Q96K83 1311 aa10.8□□□□□ -0.68
MSL3-201ENST00000312196 VAMP4O75379 141 aa10.8□□□□□ -0.68
MSL3-201ENST00000312196 GMPSP49915 693 aaPredicted RBP10.8□□□□□ -0.68
MSL3-201ENST00000312196 NOGQ13253 232 aa10.8□□□□□ -0.68
MSL3-201ENST00000312196 FAM89AQ96GI7 184 aa10.8□□□□□ -0.68
MSL3-201ENST00000312196 CDC5LQ99459 802 aaKnown RBP10.8□□□□□ -0.68
MSL3-201ENST00000312196 FANCIQ9NVI1 1328 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms