RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 YEATS4O95619 227 aa20.72■□□□□ 0.91
ATP2A3-201ENST00000309890 CEBPAP49715 358 aaPredicted RBP20.72■□□□□ 0.91
ATP2A3-201ENST00000309890 CAVIN4Q5BKX8 364 aa20.72■□□□□ 0.91
ATP2A3-201ENST00000309890 COPS6Q7L5N1 327 aa20.72■□□□□ 0.91
ATP2A3-201ENST00000309890 ABCA5Q8WWZ7 1642 aa20.72■□□□□ 0.91
ATP2A3-201ENST00000309890 TAF4BQ92750 862 aa20.72■□□□□ 0.91
ATP2A3-201ENST00000309890 CHL1O00533 1208 aa20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 RANBP6O60518 1105 aaKnown RBP20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 ZNF287Q9HBT7 754 aa20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 POLR3GO15318 223 aaPredicted RBP20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 USP8P40818 1118 aa20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 GNG11P61952 73 aa20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 RUFY3Q7L099 469 aa20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 KRT222Q8N1A0 295 aa20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 NUP88Q99567 741 aaPredicted RBP20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 TUBB4AP04350 444 aa20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 UBASH3AP57075 661 aa20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 EYA1Q99502 592 aa20.71■□□□□ 0.91
ATP2A3-201ENST00000309890 ISM2Q6H9L7 571 aa20.7■□□□□ 0.9
ATP2A3-201ENST00000309890 MAP3K5Q99683 1374 aa20.7■□□□□ 0.9
ATP2A3-201ENST00000309890 JARID2Q92833 1246 aaPredicted RBP20.7■□□□□ 0.9
ATP2A3-201ENST00000309890 G2E3Q7L622 706 aa20.7■□□□□ 0.9
ATP2A3-201ENST00000309890 CATIPQ7Z7H3 387 aa20.7■□□□□ 0.9
ATP2A3-201ENST00000309890 CENPHQ9H3R5 247 aa20.7■□□□□ 0.9
ATP2A3-201ENST00000309890 AOX1Q06278 1338 aa20.7■□□□□ 0.9
ATP2A3-201ENST00000309890 AOPEPQ8N6M6 819 aa20.69■□□□□ 0.9
ATP2A3-201ENST00000309890 TEX13AQ9BXU3 409 aaPredicted RBP20.69■□□□□ 0.9
ATP2A3-201ENST00000309890 KRT28Q7Z3Y7 464 aa20.69■□□□□ 0.9
ATP2A3-201ENST00000309890 PYM1Q9BRP8 204 aaKnown RBP20.69■□□□□ 0.9
ATP2A3-201ENST00000309890 ZNF652Q9Y2D9 606 aa20.69■□□□□ 0.9
ATP2A3-201ENST00000309890 ADGBQ8N7X0 1667 aa20.69■□□□□ 0.9
ATP2A3-201ENST00000309890 IL15P40933 162 aaPredicted RBP20.69■□□□□ 0.9
ATP2A3-201ENST00000309890 LMBR1LQ6UX01 489 aa20.69■□□□□ 0.9
ATP2A3-201ENST00000309890 RAB11FIP4Q86YS3 637 aa20.69■□□□□ 0.9
ATP2A3-201ENST00000309890 KDM5CP41229 1560 aa20.68■□□□□ 0.9
ATP2A3-201ENST00000309890 SLC26A6Q9BXS9 759 aa20.68■□□□□ 0.9
ATP2A3-201ENST00000309890 SBNO2Q9Y2G9 1366 aa20.68■□□□□ 0.9
ATP2A3-201ENST00000309890 ZHX1Q9UKY1 873 aaPredicted RBP20.68■□□□□ 0.9
ATP2A3-201ENST00000309890 PTGS1P23219 599 aa20.68■□□□□ 0.9
ATP2A3-201ENST00000309890 LMBRD1Q9NUN5 540 aa20.68■□□□□ 0.9
ATP2A3-201ENST00000309890 ZNF521Q96K83 1311 aa20.68■□□□□ 0.9
ATP2A3-201ENST00000309890 CCDC194A0A1B0GVG4 234 aa20.67■□□□□ 0.9
ATP2A3-201ENST00000309890 MFSD6Q6ZSS7 791 aa20.67■□□□□ 0.9
ATP2A3-201ENST00000309890 CCDC144CPQ8IYA2 1237 aa20.67■□□□□ 0.9
ATP2A3-201ENST00000309890 ALG1Q9BT22 464 aa20.67■□□□□ 0.9
ATP2A3-201ENST00000309890 USO1O60763 962 aaKnown RBP20.67■□□□□ 0.9
ATP2A3-201ENST00000309890 NLRP5P59047 1200 aa20.67■□□□□ 0.9
ATP2A3-201ENST00000309890 MAP3K19Q56UN5 1328 aa20.67■□□□□ 0.9
ATP2A3-201ENST00000309890 ABCC2Q92887 1545 aa20.67■□□□□ 0.9
ATP2A3-201ENST00000309890 ZBTB43O43298 467 aa20.67■□□□□ 0.9
ATP2A3-201ENST00000309890 MKNK2Q9HBH9 465 aa20.67■□□□□ 0.9
ATP2A3-201ENST00000309890 BABAM1Q9NWV8 329 aa20.67■□□□□ 0.9
ATP2A3-201ENST00000309890 SLU7O95391 586 aaKnown RBP20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 FGFR1OPO95684 399 aaKnown RBP20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 EDC4Q6P2E9 1401 aaKnown RBP20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 CCDC12Q8WUD4 166 aaPredicted RBP20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 KIF24Q5T7B8 1368 aa20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 MAGI2Q86UL8 1455 aa20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 UQCRFS1P1P0C7P4 283 aa20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 GPTP24298 496 aa20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 PAFAH1B1P43034 410 aa20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 SEC63Q9UGP8 760 aaKnown RBP20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 DNAI1Q9UI46 699 aa20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 SPTLC2O15270 562 aa20.66■□□□□ 0.9
ATP2A3-201ENST00000309890 CACNA2D4Q7Z3S7 1137 aa20.65■□□□□ 0.9
ATP2A3-201ENST00000309890 DHX32Q7L7V1 743 aaKnown RBP20.65■□□□□ 0.9
ATP2A3-201ENST00000309890 RAB34Q9BZG1 259 aa20.65■□□□□ 0.9
ATP2A3-201ENST00000309890 SGSM2O43147 1006 aa20.65■□□□□ 0.9
ATP2A3-201ENST00000309890 USP5P45974 858 aa20.65■□□□□ 0.9
ATP2A3-201ENST00000309890 TERF1P54274 439 aa20.65■□□□□ 0.9
ATP2A3-201ENST00000309890 CWF19L2Q2TBE0 894 aaKnown RBP20.65■□□□□ 0.9
ATP2A3-201ENST00000309890 CCDC94Q9BW85 323 aaPredicted RBP20.65■□□□□ 0.9
ATP2A3-201ENST00000309890 SRRTQ9BXP5 876 aaKnown RBP20.65■□□□□ 0.9
ATP2A3-201ENST00000309890 RTL1A6NKG5 1358 aa20.64■□□□□ 0.9
ATP2A3-201ENST00000309890 ATL3Q6DD88 541 aa20.64■□□□□ 0.9
ATP2A3-201ENST00000309890 GTF2F1P35269 517 aaKnown RBP eCLIP20.64■□□□□ 0.89
ATP2A3-201ENST00000309890 PAG1Q9NWQ8 432 aa20.64■□□□□ 0.89
ATP2A3-201ENST00000309890 SHTN1A0MZ66 631 aa20.64■□□□□ 0.89
ATP2A3-201ENST00000309890 BMP15O95972 392 aa20.64■□□□□ 0.89
ATP2A3-201ENST00000309890 LUZP1Q86V48 1076 aa20.64■□□□□ 0.89
ATP2A3-201ENST00000309890 TMX1Q9H3N1 280 aa20.64■□□□□ 0.89
ATP2A3-201ENST00000309890 ABCC4O15439 1325 aa20.64■□□□□ 0.89
ATP2A3-201ENST00000309890 KDM6BO15054 1643 aa20.64■□□□□ 0.89
ATP2A3-201ENST00000309890 TSG101Q99816 390 aa20.64■□□□□ 0.89
ATP2A3-201ENST00000309890 CPA1P15085 419 aa20.63■□□□□ 0.89
ATP2A3-201ENST00000309890 SLC39A6Q13433 755 aa20.63■□□□□ 0.89
ATP2A3-201ENST00000309890 PTPDC1A2A3K4 754 aa20.63■□□□□ 0.89
ATP2A3-201ENST00000309890 N4BP3O15049 544 aa20.63■□□□□ 0.89
ATP2A3-201ENST00000309890 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
ATP2A3-201ENST00000309890 ATP2B3Q16720 1220 aa20.62■□□□□ 0.89
ATP2A3-201ENST00000309890 TMTC2Q8N394 836 aa20.62■□□□□ 0.89
ATP2A3-201ENST00000309890 SNX14Q9Y5W7 946 aa20.62■□□□□ 0.89
ATP2A3-201ENST00000309890 GOLGA6L7A0A1B0GV03 622 aa20.62■□□□□ 0.89
ATP2A3-201ENST00000309890 LMOD1P29536 600 aaPredicted RBP20.62■□□□□ 0.89
ATP2A3-201ENST00000309890 MEX3CQ5U5Q3 659 aaKnown RBP20.62■□□□□ 0.89
ATP2A3-201ENST00000309890 ARFGAP3Q9NP61 516 aa20.62■□□□□ 0.89
ATP2A3-201ENST00000309890 PRC1O43663 620 aa20.62■□□□□ 0.89
ATP2A3-201ENST00000309890 UBA7P41226 1012 aa20.62■□□□□ 0.89
ATP2A3-201ENST00000309890 WTAPQ15007 396 aa20.62■□□□□ 0.89
ATP2A3-201ENST00000309890 BICDL1Q6ZP65 573 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms