RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 GPR108Q9NPR9 543 aa17.32■□□□□ 0.36
EIF3F-201ENST00000309828 COL24A1Q17RW2 1714 aa17.32■□□□□ 0.36
EIF3F-201ENST00000309828 TNS1Q9HBL0 1735 aaKnown RBP17.32■□□□□ 0.36
EIF3F-201ENST00000309828 UBR3Q6ZT12 1888 aa17.31■□□□□ 0.36
EIF3F-201ENST00000309828 RTL9Q8NET4 1388 aa17.31■□□□□ 0.36
EIF3F-201ENST00000309828 ANKRD18BA2A2Z9 1011 aa17.31■□□□□ 0.36
EIF3F-201ENST00000309828 NUTM1Q86Y26 1132 aa17.31■□□□□ 0.36
EIF3F-201ENST00000309828 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
EIF3F-201ENST00000309828 ERC2O15083 957 aa17.3■□□□□ 0.36
EIF3F-201ENST00000309828 TAF7LQ5H9L4 462 aa17.3■□□□□ 0.36
EIF3F-201ENST00000309828 TBC1D9BQ66K14 1250 aa17.3■□□□□ 0.36
EIF3F-201ENST00000309828 ATG9AQ7Z3C6 839 aa17.3■□□□□ 0.36
EIF3F-201ENST00000309828 AACSQ86V21 672 aa17.3■□□□□ 0.36
EIF3F-201ENST00000309828 SYNE4Q8N205 404 aa17.3■□□□□ 0.36
EIF3F-201ENST00000309828 PROM2Q8N271 834 aa17.3■□□□□ 0.36
EIF3F-201ENST00000309828 SETDB2Q96T68 719 aa17.3■□□□□ 0.36
EIF3F-201ENST00000309828 UPF2Q9HAU5 1272 aaKnown RBP17.3■□□□□ 0.36
EIF3F-201ENST00000309828 ECHDC1Q9NTX5 307 aa17.3■□□□□ 0.36
EIF3F-201ENST00000309828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.29■□□□□ 0.36
EIF3F-201ENST00000309828 GLRX3O76003 335 aaKnown RBP17.29■□□□□ 0.36
EIF3F-201ENST00000309828 SLC10A5Q5PT55 438 aa17.29■□□□□ 0.36
EIF3F-201ENST00000309828 EAF2Q96CJ1 260 aaPredicted RBP17.29■□□□□ 0.36
EIF3F-201ENST00000309828 SRP68Q9UHB9 627 aaKnown RBP17.29■□□□□ 0.36
EIF3F-201ENST00000309828 DDX60Q8IY21 1712 aaKnown RBP17.29■□□□□ 0.36
EIF3F-201ENST00000309828 SDSP20132 328 aa17.28■□□□□ 0.36
EIF3F-201ENST00000309828 ITGA6P23229 1130 aa17.28■□□□□ 0.36
EIF3F-201ENST00000309828 TFCP2Q12800 502 aa17.28■□□□□ 0.36
EIF3F-201ENST00000309828 CCDC152Q4G0S7 254 aa17.28■□□□□ 0.36
EIF3F-201ENST00000309828 TNNI3KQ59H18 835 aa17.28■□□□□ 0.36
EIF3F-201ENST00000309828 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
EIF3F-201ENST00000309828 AMIGO3Q86WK7 504 aa17.28■□□□□ 0.36
EIF3F-201ENST00000309828 PI4K2BQ8TCG2 481 aa17.28■□□□□ 0.36
EIF3F-201ENST00000309828 GREM2Q9H772 168 aa17.28■□□□□ 0.36
EIF3F-201ENST00000309828 FPGT-TNNI3KV9GXZ4 949 aa17.28■□□□□ 0.36
EIF3F-201ENST00000309828 TUBGCP6Q96RT7 1819 aa17.28■□□□□ 0.36
EIF3F-201ENST00000309828 PHF14O94880 888 aa17.27■□□□□ 0.36
EIF3F-201ENST00000309828 LRP5O75197 1615 aa17.27■□□□□ 0.36
EIF3F-201ENST00000309828 FAM177BA6PVY3 158 aa17.26■□□□□ 0.35
EIF3F-201ENST00000309828 HCLS1P14317 486 aaPredicted RBP17.26■□□□□ 0.35
EIF3F-201ENST00000309828 ANP32AP39687 249 aaKnown RBP17.26■□□□□ 0.35
EIF3F-201ENST00000309828 SF3B3Q15393 1217 aaKnown RBP17.26■□□□□ 0.35
EIF3F-201ENST00000309828 TPTE2Q6XPS3 522 aa17.26■□□□□ 0.35
EIF3F-201ENST00000309828 TBC1D9Q6ZT07 1266 aa17.26■□□□□ 0.35
EIF3F-201ENST00000309828 SMIM5Q71RC9 77 aa17.26■□□□□ 0.35
EIF3F-201ENST00000309828 FLAD1Q8NFF5 587 aa17.26■□□□□ 0.35
EIF3F-201ENST00000309828 ZNF594Q96JF6 807 aaPredicted RBP17.26■□□□□ 0.35
EIF3F-201ENST00000309828 CEP126Q9P2H0 1117 aa17.26■□□□□ 0.35
EIF3F-201ENST00000309828 AKAP2Q9Y2D5 859 aa17.26■□□□□ 0.35
EIF3F-201ENST00000309828 CARMIL3Q8ND23 1372 aa17.26■□□□□ 0.35
EIF3F-201ENST00000309828 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
EIF3F-201ENST00000309828 ERFEQ4G0M1 354 aa17.25■□□□□ 0.35
EIF3F-201ENST00000309828 LRRC24Q50LG9 513 aa17.25■□□□□ 0.35
EIF3F-201ENST00000309828 BICDL1Q6ZP65 573 aa17.25■□□□□ 0.35
EIF3F-201ENST00000309828 NBPF5PQ86XG9 351 aaPredicted RBP17.25■□□□□ 0.35
EIF3F-201ENST00000309828 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
EIF3F-201ENST00000309828 ZNF609O15014 1411 aa17.24■□□□□ 0.35
EIF3F-201ENST00000309828 SEC24BO95487 1268 aa17.24■□□□□ 0.35
EIF3F-201ENST00000309828 TSHZ3Q63HK5 1081 aa17.24■□□□□ 0.35
EIF3F-201ENST00000309828 LDHAL6AQ6ZMR3 332 aa17.24■□□□□ 0.35
EIF3F-201ENST00000309828 CNTROBQ8N137 903 aa17.24■□□□□ 0.35
EIF3F-201ENST00000309828 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
EIF3F-201ENST00000309828 CCDC8Q9H0W5 538 aaPredicted RBP17.24■□□□□ 0.35
EIF3F-201ENST00000309828 RIPOR2Q9Y4F9 1068 aa17.24■□□□□ 0.35
EIF3F-201ENST00000309828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.24■□□□□ 0.35
EIF3F-201ENST00000309828 RIC1Q4ADV7 1423 aa17.23■□□□□ 0.35
EIF3F-201ENST00000309828 TRIM6-TRIM34B2RNG4 842 aa17.23■□□□□ 0.35
EIF3F-201ENST00000309828 GYS1P13807 737 aa17.23■□□□□ 0.35
EIF3F-201ENST00000309828 PUS3Q9BZE2 481 aaKnown RBP17.23■□□□□ 0.35
EIF3F-201ENST00000309828 MROH5Q6ZUA9 1318 aa17.22■□□□□ 0.35
EIF3F-201ENST00000309828 ATP5JP18859 108 aa17.22■□□□□ 0.35
EIF3F-201ENST00000309828 NFIXQ14938 502 aa17.22■□□□□ 0.35
EIF3F-201ENST00000309828 CDC5LQ99459 802 aaKnown RBP17.22■□□□□ 0.35
EIF3F-201ENST00000309828 CNNM1Q9NRU3 951 aa17.22■□□□□ 0.35
EIF3F-201ENST00000309828 TFCP2L1Q9NZI6 479 aa17.22■□□□□ 0.35
EIF3F-201ENST00000309828 DBNLQ9UJU6 430 aaKnown RBP17.22■□□□□ 0.35
EIF3F-201ENST00000309828 IGHMBP2P38935 993 aaKnown RBP17.21■□□□□ 0.35
EIF3F-201ENST00000309828 ZNF827Q17R98 1081 aa17.21■□□□□ 0.35
EIF3F-201ENST00000309828 METTL24Q5JXM2 366 aa17.21■□□□□ 0.35
EIF3F-201ENST00000309828 RILPL2Q969X0 211 aa17.21■□□□□ 0.35
EIF3F-201ENST00000309828 NLRP3Q96P20 1036 aa17.21■□□□□ 0.35
EIF3F-201ENST00000309828 TLR7Q9NYK1 1049 aaKnown RBP17.21■□□□□ 0.35
EIF3F-201ENST00000309828 ABCC12Q96J65 1359 aa17.2■□□□□ 0.34
EIF3F-201ENST00000309828 TM4SF1P30408 202 aa17.2■□□□□ 0.34
EIF3F-201ENST00000309828 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
EIF3F-201ENST00000309828 EVI5LQ96CN4 794 aa17.2■□□□□ 0.34
EIF3F-201ENST00000309828 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
EIF3F-201ENST00000309828 MPHOSPH8Q99549 860 aa17.2■□□□□ 0.34
EIF3F-201ENST00000309828 A0A1B0GUL7 405 aa17.19■□□□□ 0.34
EIF3F-201ENST00000309828 TICAM2Q86XR7 235 aa17.19■□□□□ 0.34
EIF3F-201ENST00000309828 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
EIF3F-201ENST00000309828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.19■□□□□ 0.34
EIF3F-201ENST00000309828 CAMKK2Q96RR4 588 aa17.19■□□□□ 0.34
EIF3F-201ENST00000309828 DBNDD2Q9BQY9 259 aa17.19■□□□□ 0.34
EIF3F-201ENST00000309828 CHMLP26374 656 aa17.18■□□□□ 0.34
EIF3F-201ENST00000309828 SF3B2Q13435 895 aaKnown RBP17.18■□□□□ 0.34
EIF3F-201ENST00000309828 NLGN1Q8N2Q7 840 aa17.18■□□□□ 0.34
EIF3F-201ENST00000309828 VGLL2Q8N8G2 317 aa17.18■□□□□ 0.34
EIF3F-201ENST00000309828 CNBD1Q8NA66 436 aa17.18■□□□□ 0.34
EIF3F-201ENST00000309828 DDRGK1Q96HY6 314 aa17.18■□□□□ 0.34
EIF3F-201ENST00000309828 NEUROD6Q96NK8 337 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms