RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 APBA3O96018 575 aa10.36□□□□□ -0.75
LCLAT1-201ENST00000309052 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.36□□□□□ -0.75
LCLAT1-201ENST00000309052 EYA2O00167 538 aa10.36□□□□□ -0.75
LCLAT1-201ENST00000309052 RRP12Q5JTH9 1297 aaKnown RBP10.36□□□□□ -0.75
LCLAT1-201ENST00000309052 IGHMBP2P38935 993 aaKnown RBP10.36□□□□□ -0.75
LCLAT1-201ENST00000309052 TRPC5Q9UL62 973 aaPredicted RBP10.36□□□□□ -0.75
LCLAT1-201ENST00000309052 JCADQ9P266 1359 aa10.36□□□□□ -0.75
LCLAT1-201ENST00000309052 ZKSCAN1P17029 563 aaPredicted RBP10.36□□□□□ -0.75
LCLAT1-201ENST00000309052 USP26Q9BXU7 913 aa10.36□□□□□ -0.75
LCLAT1-201ENST00000309052 ZGPATQ8N5A5 531 aaKnown RBP10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 SMARCC1Q92922 1105 aaPredicted RBP10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 NCAPD2Q15021 1401 aa10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 PTH1RQ03431 593 aa10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 LINC00116Q8NCU8 138 aa10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 GPR101Q96P66 508 aaPredicted RBP10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 CDCA7Q9BWT1 371 aaPredicted RBP10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 ZNF652Q9Y2D9 606 aa10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 POLA2Q14181 598 aa10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 A0A0D9SFI3 127 aa10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 NKX1-1Q15270 411 aaPredicted RBP10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 ANKIB1Q9P2G1 1089 aa10.35□□□□□ -0.75
LCLAT1-201ENST00000309052 SLIT3O75094 1523 aa10.34□□□□□ -0.75
LCLAT1-201ENST00000309052 ERFEQ4G0M1 354 aa10.34□□□□□ -0.75
LCLAT1-201ENST00000309052 NECAB1Q8N987 351 aa10.34□□□□□ -0.75
LCLAT1-201ENST00000309052 ZBTB38Q8NAP3 1195 aaPredicted RBP10.34□□□□□ -0.75
LCLAT1-201ENST00000309052 XAGE2Q96GT9 111 aa10.34□□□□□ -0.75
LCLAT1-201ENST00000309052 TRAPPC3LQ5T215 181 aa10.34□□□□□ -0.75
LCLAT1-201ENST00000309052 LRP2BPQ9P2M1 347 aa10.34□□□□□ -0.75
LCLAT1-201ENST00000309052 H7C1W4 665 aa10.34□□□□□ -0.75
LCLAT1-201ENST00000309052 DEKP35659 375 aaKnown RBP10.34□□□□□ -0.75
LCLAT1-201ENST00000309052 IL15P40933 162 aaPredicted RBP10.34□□□□□ -0.75
LCLAT1-201ENST00000309052 MIGA1Q8NAN2 632 aa10.34□□□□□ -0.75
LCLAT1-201ENST00000309052 G3V3G9 751 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 K7ELQ4 463 aaPredicted RBP10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 DCAF8Q5TAQ9 597 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 TTLL11Q8NHH1 800 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 PI4K2BQ8TCG2 481 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 VPS37CA5D8V6 355 aaPredicted RBP10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 IL6STP40189 918 aaPredicted RBP10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 ZAP70P43403 619 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 KRT27Q7Z3Y8 459 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 RAI14Q9P0K7 980 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 ISY1Q9ULR0 285 aaKnown RBP10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 NSFL1CQ9UNZ2 370 aaKnown RBP10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 FOXO4P98177 505 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 TBC1D9BQ66K14 1250 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 SLC51AQ86UW1 340 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 EVI5LQ96CN4 794 aa10.33□□□□□ -0.76
LCLAT1-201ENST00000309052 GYG1P46976 350 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 CTSWP56202 376 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 SCARF1Q14162 830 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 VPS72Q15906 364 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 ZNF589Q86UQ0 364 aaPredicted RBP10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 FERMT3Q86UX7 667 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 RBM8AQ9Y5S9 174 aaKnown RBP10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 ROBO1Q9Y6N7 1651 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 BCAMP50895 628 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 CCDC82Q8N4S0 544 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 DDX11Q96FC9 970 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 NLRP3Q96P20 1036 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 GDPD2Q9HCC8 539 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 UBN2Q6ZU65 1347 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 KIF1AQ12756 1690 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 PHKA1P46020 1223 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 INTS5Q6P9B9 1019 aaKnown RBP10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 PAG1Q9NWQ8 432 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 PDE8AO60658 829 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 SSFA2P28290 1259 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 RABEP1Q15276 862 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 SLC9C2Q5TAH2 1124 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 CCDC83Q8IWF9 413 aa10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
LCLAT1-201ENST00000309052 TTLL5Q6EMB2 1281 aa10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 COPRSQ9NQ92 184 aa10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 PCCAP05165 728 aaPredicted RBP10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 PKP1Q13835 747 aa10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 CCDC152Q4G0S7 254 aa10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 LRP10Q7Z4F1 713 aa10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 AMIGO3Q86WK7 504 aa10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 C6orf229H3BNL8 230 aa10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 EIF5P55010 431 aaKnown RBP10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 MCTP1Q6DN14 999 aa10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 F8W031 263 aaPredicted RBP10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 ADCK5Q3MIX3 580 aa10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 VPS53Q5VIR6 699 aa10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 ANKRD18AQ8IVF6 992 aa10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 ZNF622Q969S3 477 aaKnown RBP eCLIP10.31□□□□□ -0.76
LCLAT1-201ENST00000309052 RIMBP2O15034 1052 aa10.3□□□□□ -0.76
LCLAT1-201ENST00000309052 THRAP3Q9Y2W1 955 aaKnown RBP10.3□□□□□ -0.76
LCLAT1-201ENST00000309052 MINDY4BA8MYZ0 360 aa10.3□□□□□ -0.76
LCLAT1-201ENST00000309052 TPTE2Q6XPS3 522 aa10.3□□□□□ -0.76
LCLAT1-201ENST00000309052 ISCA1Q9BUE6 129 aa10.3□□□□□ -0.76
LCLAT1-201ENST00000309052 CHMP5Q9NZZ3 219 aa10.3□□□□□ -0.76
LCLAT1-201ENST00000309052 CCT2P78371 535 aaKnown RBP10.3□□□□□ -0.76
LCLAT1-201ENST00000309052 TAF6LQ9Y6J9 622 aa10.3□□□□□ -0.76
LCLAT1-201ENST00000309052 SGSM2O43147 1006 aa10.3□□□□□ -0.76
LCLAT1-201ENST00000309052 C3orf67Q6ZVT6 689 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms