RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 OSBPL3Q9H4L5 887 aa15.85■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 LAMB2P55268 1798 aa15.85■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 RFX5P48382 616 aaPredicted RBP15.84■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 R3HDM1Q15032 1099 aaKnown RBP15.84■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 BMP2KLQ5H9B9 411 aa15.84■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 RHPN1Q8TCX5 695 aa15.84■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 DDX60Q8IY21 1712 aaKnown RBP15.84■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 CASZ1Q86V15 1759 aa15.83■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 FAM177BA6PVY3 158 aa15.83■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 POLRMTO00411 1230 aaKnown RBP15.83■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 IRS4O14654 1257 aaPredicted RBP15.83■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 SMARCA5O60264 1052 aaPredicted RBP15.83■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 SLC10A5Q5PT55 438 aa15.83■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 ABCC12Q96J65 1359 aa15.83■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 SALL3Q9BXA9 1300 aa15.83■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 NRXN2Q9P2S2 1712 aa15.83■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 CSF1RP07333 972 aa15.83■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 ERFEQ4G0M1 354 aa15.83■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 LMBR1LQ6UX01 489 aa15.83■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 NUTM1Q86Y26 1132 aa15.83■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 C16orf71Q8IYS4 520 aaPredicted RBP15.83■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 NYXQ9GZU5 481 aa15.83■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 RBM19Q9Y4C8 960 aaKnown RBP15.83■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 G3BP1Q13283 466 aaKnown RBP eCLIP15.82■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 NBPF5PQ86XG9 351 aaPredicted RBP15.82■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 STAP2Q9UGK3 403 aa15.82■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 RIC1Q4ADV7 1423 aa15.81■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 APBB1O00213 710 aa15.81■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 PDE8AO60658 829 aa15.81■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 SERPINB2P05120 415 aa15.81■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 PTPN12Q05209 780 aaKnown RBP15.81■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 TPTE2Q6XPS3 522 aa15.81■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 SLC16A10Q8TF71 515 aa15.81■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 HCLS1P14317 486 aaPredicted RBP15.8■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 CTSWP56202 376 aa15.8■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 MSL1Q68DK7 614 aa15.8■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 PRR5LQ6MZQ0 368 aa15.8■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 FBXO3Q9UK99 471 aa15.8■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 PA2G4Q9UQ80 394 aaKnown RBP15.8■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 AOX1Q06278 1338 aa15.8■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 MMP10P09238 476 aa15.79■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 HSP90B1P14625 803 aaKnown RBP15.79■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 PDE1AP54750 535 aa15.79■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 TTLL11Q8NHH1 800 aa15.79■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 MYH3P11055 1940 aa15.79■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 TTC22Q5TAA0 569 aa15.79■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 C3orf67Q6ZVT6 689 aa15.79■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 CNBD1Q8NA66 436 aa15.79■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 OTUD7AQ8TE49 926 aaPredicted RBP15.79■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 TNRC6CQ9HCJ0 1690 aaKnown RBP15.78■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 SASH1O94885 1247 aa15.78■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 OS9Q13438 667 aaPredicted RBP15.78■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 CLASRPQ8N2M8 674 aaKnown RBP15.78■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 RTL9Q8NET4 1388 aa15.78■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 CIAO1O76071 339 aa15.77■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 MX1P20591 662 aa15.77■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 SF3B3Q15393 1217 aaKnown RBP15.77■□□□□ 0.12
SHANK2-AS3-201ENST00000307548 GTF2E1P29083 439 aaPredicted RBP15.76■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 CCDC24Q8N4L8 307 aa15.76■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 IL1RAPL2Q9NP60 686 aa15.76■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 ZBTB22O15209 634 aa15.76■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 GREM2Q9H772 168 aa15.76■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 PARP3Q9Y6F1 533 aa15.76■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 GSPT1P15170 499 aaKnown RBP15.75■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 CCDC57Q2TAC2 916 aa15.75■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 KLHDC4Q8TBB5 520 aa15.75■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 GPR108Q9NPR9 543 aa15.75■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 TTC41PQ6P2S7 1318 aa15.75■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 ANKRD31Q8N7Z5 1873 aa15.75■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 LRP5O75197 1615 aa15.74■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 KLRG2A4D1S0 409 aaPredicted RBP15.74■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 EYA2O00167 538 aa15.74■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 IL15P40933 162 aaPredicted RBP15.74■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 ATG9AQ7Z3C6 839 aa15.74■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 CHMP3Q9Y3E7 222 aa15.74■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 COL4A1P02462 1669 aa15.74■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 ITGA6P23229 1130 aa15.73■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 ST5P78524 1137 aa15.73■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 IFIT5Q13325 482 aaKnown RBP15.73■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 CRY2Q49AN0 593 aa15.73■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 CCDC152Q4G0S7 254 aa15.73■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 NLRP3Q96P20 1036 aa15.73■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 CCDC85AQ96PX6 553 aaPredicted RBP15.73■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 MTFR1LQ9H019 292 aa15.73■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 SIL1Q9H173 461 aa15.73■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 EIF5BO60841 1220 aaKnown RBP15.73■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 BRIP1Q9BX63 1249 aa15.73■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 NPHP1O15259 732 aa15.72■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 ZBTB7AO95365 584 aa15.72■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 IFIT2P09913 472 aaKnown RBP15.72■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 EAF2Q96CJ1 260 aaPredicted RBP15.72■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 SGIP1Q9BQI5 828 aa15.72■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 SEC31BQ9NQW1 1179 aa15.72■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 ANKRD18BA2A2Z9 1011 aa15.71■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 SDSP20132 328 aa15.71■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 PI4K2BQ8TCG2 481 aa15.71■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 ZNF594Q96JF6 807 aaPredicted RBP15.71■□□□□ 0.11
SHANK2-AS3-201ENST00000307548 C10orf71Q711Q0 1435 aa15.71■□□□□ 0.1
SHANK2-AS3-201ENST00000307548 ERC2O15083 957 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms