RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 CFAP58Q5T655 872 aa16.31■□□□□ 0.2
CHRNA7-201ENST00000306901 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
CHRNA7-201ENST00000306901 CYLC1P35663 651 aaPredicted RBP16.31■□□□□ 0.2
CHRNA7-201ENST00000306901 FLIIQ13045 1269 aa16.31■□□□□ 0.2
CHRNA7-201ENST00000306901 CCDC25Q86WR0 208 aa16.31■□□□□ 0.2
CHRNA7-201ENST00000306901 OGFRQ9NZT2 677 aa16.31■□□□□ 0.2
CHRNA7-201ENST00000306901 RTEL1-TNFRSF6BF6WH68 1400 aa16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 ARID4AP29374 1257 aaPredicted RBP16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 AFAP1Q8N556 730 aa16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 MAP3K12Q12852 859 aa16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 UBA7P41226 1012 aa16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 FAM200AQ8TCP9 573 aa16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 STAC3Q96MF2 364 aa16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 HGSO14964 777 aaPredicted RBP16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 STX17P56962 302 aa16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 CETN1Q12798 172 aa16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 SEC62Q99442 399 aaKnown RBP16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 ANKIB1Q9P2G1 1089 aa16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 LRPPRCP42704 1394 aaKnown RBP16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 RSRC1Q96IZ7 334 aaKnown RBP16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 SELENOOQ9BVL4 669 aa16.3■□□□□ 0.2
CHRNA7-201ENST00000306901 KIF20AO95235 890 aa16.29■□□□□ 0.2
CHRNA7-201ENST00000306901 IFI16Q16666 785 aaKnown RBP16.29■□□□□ 0.2
CHRNA7-201ENST00000306901 ALDH1L2Q3SY69 923 aa16.29■□□□□ 0.2
CHRNA7-201ENST00000306901 RASAL2Q9UJF2 1139 aa16.29■□□□□ 0.2
CHRNA7-201ENST00000306901 KIF5BP33176 963 aa16.29■□□□□ 0.2
CHRNA7-201ENST00000306901 SMC6Q96SB8 1091 aa16.29■□□□□ 0.2
CHRNA7-201ENST00000306901 CFTRP13569 1480 aa16.29■□□□□ 0.2
CHRNA7-201ENST00000306901 SEPT6Q14141 434 aa16.29■□□□□ 0.2
CHRNA7-201ENST00000306901 SAMM50Q9Y512 469 aa16.29■□□□□ 0.2
CHRNA7-201ENST00000306901 STAT6P42226 847 aa16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 UBLCP1Q8WVY7 318 aaPredicted RBP16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 BRF1Q92994 677 aa16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 TPD52P55327 224 aaPredicted RBP16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 C17orf53Q8N3J3 647 aaPredicted RBP16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 PPP1R9BQ96SB3 815 aa16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 MRVI1Q9Y6F6 885 aa16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 TYRO3Q06418 890 aa16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 KANK3Q6NY19 840 aa16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 TBC1D5Q92609 795 aa16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 RRAGDQ9NQL2 400 aaPredicted RBP16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 HPDP32754 393 aaPredicted RBP16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 ACTN2P35609 894 aa16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 ZC3H6P61129 1189 aaKnown RBP16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 FAM76AQ8TAV0 307 aa16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 BICD1Q96G01 975 aa16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 ZNF287Q9HBT7 754 aa16.28■□□□□ 0.2
CHRNA7-201ENST00000306901 A0A1B0GUL7 405 aa16.27■□□□□ 0.2
CHRNA7-201ENST00000306901 TACC1O75410 805 aa16.27■□□□□ 0.2
CHRNA7-201ENST00000306901 PROSER2Q86WR7 435 aaPredicted RBP16.27■□□□□ 0.2
CHRNA7-201ENST00000306901 CCDC50Q8IVM0 306 aa16.27■□□□□ 0.2
CHRNA7-201ENST00000306901 DHX58Q96C10 678 aa16.27■□□□□ 0.2
CHRNA7-201ENST00000306901 IFNKQ9P0W0 207 aa16.27■□□□□ 0.2
CHRNA7-201ENST00000306901 KLF18A0A0U1RQI7 1052 aa16.27■□□□□ 0.2
CHRNA7-201ENST00000306901 SPAG5Q96R06 1193 aa16.27■□□□□ 0.19
CHRNA7-201ENST00000306901 PIP4K2BP78356 416 aa16.27■□□□□ 0.19
CHRNA7-201ENST00000306901 BMP2KLQ5H9B9 411 aa16.27■□□□□ 0.19
CHRNA7-201ENST00000306901 SDSP20132 328 aa16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 ZNF354CQ86Y25 554 aa16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 UTP14AQ9BVJ6 771 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 IFIT5Q13325 482 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 WDR78Q5VTH9 848 aa16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 SYNCQ9H7C4 482 aa16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 KIAA1107Q9UPP5 1409 aa16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 WDR66Q8TBY9 1149 aa16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 RTL1A6NKG5 1358 aa16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 NOL3O60936 208 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 EEF2P13639 858 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 SLC5A1P13866 664 aa16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 CTAGE1Q96RT6 745 aa16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 ALG1Q9BT22 464 aa16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 MAP3K2Q9Y2U5 619 aa16.26■□□□□ 0.19
CHRNA7-201ENST00000306901 F13A1P00488 732 aa16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 UBXN1Q04323 297 aa16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 MPRIPQ6WCQ1 1025 aa16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 MRPS27Q92552 414 aaKnown RBP16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 MRRFQ96E11 262 aaKnown RBP16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 ZSCAN16Q9H4T2 348 aaPredicted RBP16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 CPSF2Q9P2I0 782 aaKnown RBP16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 Q6ZUG5 572 aa16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 RAB3IL1Q8TBN0 382 aa16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 KAT14Q9H8E8 782 aa16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 CLNS1AP54105 237 aaKnown RBP16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 SMAP1Q8IYB5 467 aaPredicted RBP16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 SAMD15Q9P1V8 674 aa16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 SEPT14Q6ZU15 432 aa16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 C16orf71Q8IYS4 520 aaPredicted RBP16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 DNAI2Q9GZS0 605 aa16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 ZWINTO95229 277 aa16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 TTF1Q15361 905 aaPredicted RBP16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 NCOA7Q8NI08 942 aa16.25■□□□□ 0.19
CHRNA7-201ENST00000306901 GPTP24298 496 aa16.24■□□□□ 0.19
CHRNA7-201ENST00000306901 RNF41Q9H4P4 317 aaPredicted RBP16.24■□□□□ 0.19
CHRNA7-201ENST00000306901 ECHDC1Q9NTX5 307 aa16.24■□□□□ 0.19
CHRNA7-201ENST00000306901 RMND1Q9NWS8 449 aa16.24■□□□□ 0.19
CHRNA7-201ENST00000306901 CWC25Q9NXE8 425 aaPredicted RBP16.24■□□□□ 0.19
CHRNA7-201ENST00000306901 POLA1P09884 1462 aaPredicted RBP16.24■□□□□ 0.19
CHRNA7-201ENST00000306901 TSPY2A6NKD2 308 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms