RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 CCT4P50991 539 aaKnown RBP13.89□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 ARHGAP27Q6ZUM4 889 aa13.89□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 ARHGAP45Q92619 1136 aa13.89□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 CRAMP1Q96RY5 1269 aa13.89□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 H7C1W4 665 aa13.88□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 CTSWP56202 376 aa13.88□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 GRAPQ13588 217 aa13.88□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 SF3B3Q15393 1217 aaKnown RBP13.88□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 CCDC93Q567U6 631 aa13.88□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 ZKSCAN2Q63HK3 967 aa13.88□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 GRAPLQ8TC17 118 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 FTSJ3Q8IY81 847 aaKnown RBP13.87□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 CCDC85AQ96PX6 553 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 PLA2G12BQ9BX93 195 aa13.86□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 RCAN3Q9UKA8 241 aa13.86□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 BBOX1O75936 387 aa13.85□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 TRIM27P14373 513 aa13.85□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 CASP7P55210 303 aa13.85□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 CC2D2BQ6DHV5 1058 aa13.85□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 CDC5LQ99459 802 aaKnown RBP13.85□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 CHMP3Q9Y3E7 222 aa13.85□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 RASSF7Q02833 373 aa13.84□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 GRIPAP1Q4V328 841 aa13.84□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 ANKRD18AQ8IVF6 992 aa13.84□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 RTKN2Q8IZC4 609 aa13.84□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 CLUAP1Q96AJ1 413 aa13.84□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 TAOK3Q9H2K8 898 aa13.84□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 RTL9Q8NET4 1388 aa13.83□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 A0A1B0GUL6 1792 aa13.83□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 UBTFL1P0CB47 393 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 MS4A1P11836 297 aa13.83□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 YY1P25490 414 aa13.83□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 HDAC5Q9UQL6 1122 aa13.83□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 UTYO14607 1347 aa13.83□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 LTBP3Q9NS15 1303 aa13.83□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 COL4A1P02462 1669 aa13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 NFKBIEO00221 500 aa13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 NBPF7P0C2Y1 421 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 ITGA6P23229 1130 aa13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 FKBP4Q02790 459 aaKnown RBP eCLIP13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 TAF7LQ5H9L4 462 aa13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 DZIP1LQ8IYY4 767 aaKnown RBP13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 C7orf43Q8WVR3 580 aa13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 CELF1Q92879 486 aaKnown RBP13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 SUCLG2Q96I99 432 aa13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 GREM2Q9H772 168 aa13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 SEC31BQ9NQW1 1179 aa13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 RNF181Q9P0P0 153 aa13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 ATP6V0A2Q9Y487 856 aa13.82□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 ANKRD18BA2A2Z9 1011 aa13.81□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 LMNB1P20700 586 aa13.81□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 RPS8P62241 208 aaKnown RBP13.81□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 CCDC57Q2TAC2 916 aa13.81□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 INTS3Q68E01 1043 aaKnown RBP13.81□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 OLFM4Q6UX06 510 aa13.81□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 SP8Q8IXZ3 490 aa13.81□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 LTBP1Q14766 1721 aa13.81□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 CSF1RP07333 972 aa13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 GNAI3P08754 354 aa13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 FOXO4P98177 505 aa13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 C9orf131Q5VYM1 1079 aa13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 LMBR1LQ6UX01 489 aa13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 DPP8Q6V1X1 898 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 ITPRIPQ8IWB1 547 aa13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 TMEM57Q8N5G2 664 aa13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 SUPT20HQ8NEM7 779 aa13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 MPHOSPH8Q99549 860 aa13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 USP44Q9H0E7 712 aa13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 BICC1Q9H694 974 aaKnown RBP13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 TNNQ9UQP3 1299 aa13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 GOLGB1Q14789 3259 aaKnown RBP13.8□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 MPNDQ8N594 471 aa13.79□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 PSMD1Q99460 953 aa13.79□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 SNED1Q8TER0 1413 aa13.79□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 EPHA10Q5JZY3 1008 aa13.78□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 MEIS3Q99687 375 aa13.78□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 DUOX1Q9NRD9 1551 aa13.78□□□□□ -0.2
CSPG4P2Y-201ENST00000306853 IARSP41252 1262 aaKnown RBP13.77□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 BSDC1Q9NW68 430 aaPredicted RBP13.77□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 ANKIB1Q9P2G1 1089 aa13.77□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 NSFL1CQ9UNZ2 370 aaKnown RBP13.77□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 ZC3H4Q9UPT8 1303 aaKnown RBP13.77□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 UTRNP46939 3433 aa13.77□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 XDHP47989 1333 aa13.76□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 PPIP5K2O43314 1243 aa13.76□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 RABL6Q3YEC7 729 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 SLC51AQ86UW1 340 aa13.76□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 KAZALD1Q96I82 304 aa13.76□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 EYA3Q99504 573 aa13.76□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 LRRFIP2Q9Y608 721 aaKnown RBP13.76□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 C6orf229H3BNL8 230 aa13.75□□□□□ -0.21
CSPG4P2Y-201ENST00000306853 PLIN1O60240 522 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms