RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 CCDC191Q8NCU4 936 aa12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 ANKRD20A12PQ8NF67 263 aa12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 RBM27Q9P2N5 1060 aaKnown RBP12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 FAM177BA6PVY3 158 aa12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 HELLSQ9NRZ9 838 aa12.78□□□□□ -0.36
PCDHGC4-201ENST00000306593 NEURL1BA8MQ27 555 aa12.77□□□□□ -0.36
PCDHGC4-201ENST00000306593 TNNI3KQ59H18 835 aa12.77□□□□□ -0.36
PCDHGC4-201ENST00000306593 FPGT-TNNI3KV9GXZ4 949 aa12.77□□□□□ -0.36
PCDHGC4-201ENST00000306593 KCNQ3O43525 872 aa12.77□□□□□ -0.36
PCDHGC4-201ENST00000306593 ERVV-2B6SEH9 535 aa12.77□□□□□ -0.37
PCDHGC4-201ENST00000306593 CCDC47Q96A33 483 aaKnown RBP12.77□□□□□ -0.37
PCDHGC4-201ENST00000306593 CCDC85AQ96PX6 553 aaPredicted RBP12.77□□□□□ -0.37
PCDHGC4-201ENST00000306593 GDPD2Q9HCC8 539 aa12.77□□□□□ -0.37
PCDHGC4-201ENST00000306593 POLA2Q14181 598 aa12.77□□□□□ -0.37
PCDHGC4-201ENST00000306593 ZNF496Q96IT1 587 aaPredicted RBP12.77□□□□□ -0.37
PCDHGC4-201ENST00000306593 LARP6Q9BRS8 491 aaKnown RBP12.77□□□□□ -0.37
PCDHGC4-201ENST00000306593 RGS12O14924 1447 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 TDO2P48775 406 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 C8orf76Q96K31 380 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 NCOA7Q8NI08 942 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 NRKQ7Z2Y5 1582 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 BRD1O95696 1058 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 JARID2Q92833 1246 aaPredicted RBP12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 SIGLEC1Q9BZZ2 1709 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 CCDC196A0A1B0GTZ2 297 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 CCP110O43303 1012 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 PANK2Q9BZ23 570 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 LRP2BPQ9P2M1 347 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 CNPY2Q9Y2B0 182 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
PCDHGC4-201ENST00000306593 ERBB3P21860 1342 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 ATP5JP18859 108 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 SYT1P21579 422 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 ATP2B3Q16720 1220 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 BRF1Q92994 677 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 UBAC1Q9BSL1 405 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 ANO10Q9NW15 660 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 DACH1Q9UI36 760 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 PXDNLA1KZ92 1463 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 MEX3CQ5U5Q3 659 aaKnown RBP12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 NECAB1Q8N987 351 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 NOC3LQ8WTT2 800 aaKnown RBP12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 NAPBQ9H115 298 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 RNF41Q9H4P4 317 aaPredicted RBP12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 LMBRD1Q9NUN5 540 aa12.75□□□□□ -0.37
PCDHGC4-201ENST00000306593 EYA2O00167 538 aa12.74□□□□□ -0.37
PCDHGC4-201ENST00000306593 SLC27A2O14975 620 aa12.74□□□□□ -0.37
PCDHGC4-201ENST00000306593 RPS6KB1P23443 525 aa12.74□□□□□ -0.37
PCDHGC4-201ENST00000306593 FAM13BQ9NYF5 915 aa12.74□□□□□ -0.37
PCDHGC4-201ENST00000306593 MAP2P11137 1827 aaKnown RBP12.74□□□□□ -0.37
PCDHGC4-201ENST00000306593 GOLGA8BA8MQT2 603 aa12.74□□□□□ -0.37
PCDHGC4-201ENST00000306593 SMTNL1A8MU46 457 aa12.74□□□□□ -0.37
PCDHGC4-201ENST00000306593 PRIM1P49642 420 aaKnown RBP12.74□□□□□ -0.37
PCDHGC4-201ENST00000306593 Q6ZUG5 572 aa12.74□□□□□ -0.37
PCDHGC4-201ENST00000306593 DHX32Q7L7V1 743 aaKnown RBP12.74□□□□□ -0.37
PCDHGC4-201ENST00000306593 HMGB2P26583 209 aaKnown RBP12.73□□□□□ -0.37
PCDHGC4-201ENST00000306593 TSR1Q2NL82 804 aaKnown RBP12.73□□□□□ -0.37
PCDHGC4-201ENST00000306593 GPTP24298 496 aa12.73□□□□□ -0.37
PCDHGC4-201ENST00000306593 MTX1Q13505 466 aa12.73□□□□□ -0.37
PCDHGC4-201ENST00000306593 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
PCDHGC4-201ENST00000306593 TMEM94Q12767 1356 aa12.73□□□□□ -0.37
PCDHGC4-201ENST00000306593 CAVIN4Q5BKX8 364 aa12.73□□□□□ -0.37
PCDHGC4-201ENST00000306593 SPC24Q8NBT2 197 aa12.73□□□□□ -0.37
PCDHGC4-201ENST00000306593 CEP131Q9UPN4 1083 aa12.73□□□□□ -0.37
PCDHGC4-201ENST00000306593 COPRSQ9NQ92 184 aa12.73□□□□□ -0.37
PCDHGC4-201ENST00000306593 CBFA2T2O43439 604 aa12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 CAMK4Q16566 473 aa12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 KBTBD3Q8NAB2 608 aa12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 CDC5LQ99459 802 aaKnown RBP12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 LLPHQ9BRT6 129 aaKnown RBP12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 RAI14Q9P0K7 980 aa12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 NOL7Q9UMY1 257 aaKnown RBP12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 DNM1Q05193 864 aaKnown RBP12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 CUL4AQ13619 759 aa12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 FBXW7Q969H0 707 aa12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 USP25Q9UHP3 1055 aa12.72□□□□□ -0.37
PCDHGC4-201ENST00000306593 SMC2O95347 1197 aa12.71□□□□□ -0.37
PCDHGC4-201ENST00000306593 ZNF592Q92610 1267 aa12.71□□□□□ -0.37
PCDHGC4-201ENST00000306593 FSD2A1L4K1 749 aa12.71□□□□□ -0.37
PCDHGC4-201ENST00000306593 CDCA7Q9BWT1 371 aaPredicted RBP12.71□□□□□ -0.37
PCDHGC4-201ENST00000306593 SNRKQ9NRH2 765 aa12.71□□□□□ -0.37
PCDHGC4-201ENST00000306593 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
PCDHGC4-201ENST00000306593 CCT2P78371 535 aaKnown RBP12.71□□□□□ -0.38
PCDHGC4-201ENST00000306593 CCDC152Q4G0S7 254 aa12.71□□□□□ -0.38
PCDHGC4-201ENST00000306593 HOMER1Q86YM7 354 aa12.71□□□□□ -0.38
PCDHGC4-201ENST00000306593 LSG1Q9H089 658 aaKnown RBP12.71□□□□□ -0.38
PCDHGC4-201ENST00000306593 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.38
PCDHGC4-201ENST00000306593 FAM227BQ96M60 508 aa12.71□□□□□ -0.38
PCDHGC4-201ENST00000306593 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.38
PCDHGC4-201ENST00000306593 FBXO3Q9UK99 471 aa12.71□□□□□ -0.38
PCDHGC4-201ENST00000306593 PALD1Q9ULE6 856 aa12.71□□□□□ -0.38
PCDHGC4-201ENST00000306593 SLC12A7Q9Y666 1083 aa12.71□□□□□ -0.38
PCDHGC4-201ENST00000306593 CD2BP2O95400 341 aaKnown RBP12.7□□□□□ -0.38
PCDHGC4-201ENST00000306593 ADCY5O95622 1261 aa12.7□□□□□ -0.38
PCDHGC4-201ENST00000306593 STX1AQ16623 288 aa12.7□□□□□ -0.38
PCDHGC4-201ENST00000306593 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC4-201ENST00000306593 EAF2Q96CJ1 260 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms