RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 KMT5BQ4FZB7 885 aa21.14■□□□□ 0.97
RETREG1-201ENST00000306320 SPATA32Q96LK8 384 aa21.14■□□□□ 0.97
RETREG1-201ENST00000306320 TIGD1Q96MW7 591 aa21.14■□□□□ 0.97
RETREG1-201ENST00000306320 TLR7Q9NYK1 1049 aaKnown RBP21.14■□□□□ 0.97
RETREG1-201ENST00000306320 MRVI1Q9Y6F6 885 aa21.14■□□□□ 0.97
RETREG1-201ENST00000306320 GIGYF1O75420 1035 aaPredicted RBP21.14■□□□□ 0.97
RETREG1-201ENST00000306320 TPM3P06753 285 aa21.14■□□□□ 0.97
RETREG1-201ENST00000306320 SLFN14P0C7P3 912 aa21.14■□□□□ 0.97
RETREG1-201ENST00000306320 KIF18AQ8NI77 898 aa21.14■□□□□ 0.97
RETREG1-201ENST00000306320 COL9A3Q14050 684 aaPredicted RBP21.13■□□□□ 0.97
RETREG1-201ENST00000306320 SSH3Q8TE77 659 aa21.13■□□□□ 0.97
RETREG1-201ENST00000306320 IFIT2P09913 472 aaKnown RBP21.13■□□□□ 0.97
RETREG1-201ENST00000306320 SUCLG2Q96I99 432 aa21.13■□□□□ 0.97
RETREG1-201ENST00000306320 MYD88Q99836 296 aa21.13■□□□□ 0.97
RETREG1-201ENST00000306320 DBF4Q9UBU7 674 aaPredicted RBP21.12■□□□□ 0.97
RETREG1-201ENST00000306320 DDX41Q9UJV9 622 aaKnown RBP21.12■□□□□ 0.97
RETREG1-201ENST00000306320 PXDNQ92626 1479 aa21.12■□□□□ 0.97
RETREG1-201ENST00000306320 BICC1Q9H694 974 aaKnown RBP21.12■□□□□ 0.97
RETREG1-201ENST00000306320 SKILP12757 684 aa21.12■□□□□ 0.97
RETREG1-201ENST00000306320 TERF2Q15554 542 aa21.12■□□□□ 0.97
RETREG1-201ENST00000306320 FBXO38Q6PIJ6 1188 aa21.12■□□□□ 0.97
RETREG1-201ENST00000306320 A0A0G2JS52 829 aa21.11■□□□□ 0.97
RETREG1-201ENST00000306320 COPS6Q7L5N1 327 aa21.11■□□□□ 0.97
RETREG1-201ENST00000306320 CCDC85AQ96PX6 553 aaPredicted RBP21.11■□□□□ 0.97
RETREG1-201ENST00000306320 MTMR6Q9Y217 621 aa21.11■□□□□ 0.97
RETREG1-201ENST00000306320 XAGE3Q8WTP9 111 aa21.11■□□□□ 0.97
RETREG1-201ENST00000306320 KIF1BPQ96EK5 621 aa21.11■□□□□ 0.97
RETREG1-201ENST00000306320 ARHGAP23Q9P227 1491 aa21.11■□□□□ 0.97
RETREG1-201ENST00000306320 CTIFO43310 598 aaKnown RBP21.1■□□□□ 0.97
RETREG1-201ENST00000306320 HOMER1Q86YM7 354 aa21.1■□□□□ 0.97
RETREG1-201ENST00000306320 CLASRPQ8N2M8 674 aaKnown RBP21.1■□□□□ 0.97
RETREG1-201ENST00000306320 ADCY9O60503 1353 aa21.1■□□□□ 0.97
RETREG1-201ENST00000306320 ZNF75DP51815 510 aa21.1■□□□□ 0.97
RETREG1-201ENST00000306320 PTH1RQ03431 593 aa21.1■□□□□ 0.97
RETREG1-201ENST00000306320 PI4K2BQ8TCG2 481 aa21.1■□□□□ 0.97
RETREG1-201ENST00000306320 OSBPL3Q9H4L5 887 aa21.1■□□□□ 0.97
RETREG1-201ENST00000306320 SALL3Q9BXA9 1300 aa21.1■□□□□ 0.97
RETREG1-201ENST00000306320 ANAPC15P60006 121 aa21.09■□□□□ 0.97
RETREG1-201ENST00000306320 ERCC6LQ2NKX8 1250 aa21.09■□□□□ 0.97
RETREG1-201ENST00000306320 NR1I2O75469 434 aa21.09■□□□□ 0.97
RETREG1-201ENST00000306320 HSPA4P34932 840 aa21.09■□□□□ 0.97
RETREG1-201ENST00000306320 ZNF496Q96IT1 587 aaPredicted RBP21.09■□□□□ 0.97
RETREG1-201ENST00000306320 FAM227BQ96M60 508 aa21.09■□□□□ 0.97
RETREG1-201ENST00000306320 ATF3P18847 181 aa21.09■□□□□ 0.97
RETREG1-201ENST00000306320 TAF3Q5VWG9 929 aa21.09■□□□□ 0.97
RETREG1-201ENST00000306320 TOPAZ1Q8N9V7 1692 aa21.08■□□□□ 0.97
RETREG1-201ENST00000306320 HSP90B1P14625 803 aaKnown RBP21.08■□□□□ 0.97
RETREG1-201ENST00000306320 NEK11Q8NG66 645 aa21.08■□□□□ 0.97
RETREG1-201ENST00000306320 NOL10Q9BSC4 688 aaKnown RBP21.08■□□□□ 0.97
RETREG1-201ENST00000306320 SLIT1O75093 1534 aa21.08■□□□□ 0.96
RETREG1-201ENST00000306320 FER1L4A9Z1Z3 1794 aa21.07■□□□□ 0.96
RETREG1-201ENST00000306320 GABPB1Q06547 395 aaPredicted RBP21.07■□□□□ 0.96
RETREG1-201ENST00000306320 SLFNL1Q499Z3 407 aa21.07■□□□□ 0.96
RETREG1-201ENST00000306320 EPHA10Q5JZY3 1008 aa21.07■□□□□ 0.96
RETREG1-201ENST00000306320 CCAR2Q8N163 923 aaKnown RBP21.07■□□□□ 0.96
RETREG1-201ENST00000306320 CYP46A1Q9Y6A2 500 aa21.07■□□□□ 0.96
RETREG1-201ENST00000306320 GNL2Q13823 731 aaKnown RBP21.07■□□□□ 0.96
RETREG1-201ENST00000306320 ME3Q16798 604 aa21.07■□□□□ 0.96
RETREG1-201ENST00000306320 FUCA2Q9BTY2 467 aa21.07■□□□□ 0.96
RETREG1-201ENST00000306320 RAB11FIP3O75154 756 aa21.07■□□□□ 0.96
RETREG1-201ENST00000306320 SKIDA1Q1XH10 827 aa21.07■□□□□ 0.96
RETREG1-201ENST00000306320 CNTROBQ8N137 903 aa21.07■□□□□ 0.96
RETREG1-201ENST00000306320 KSR2Q6VAB6 950 aa21.06■□□□□ 0.96
RETREG1-201ENST00000306320 ZNF397Q8NF99 534 aaPredicted RBP21.06■□□□□ 0.96
RETREG1-201ENST00000306320 NWD1Q149M9 1564 aa21.06■□□□□ 0.96
RETREG1-201ENST00000306320 H3BQV1 296 aa21.06■□□□□ 0.96
RETREG1-201ENST00000306320 G3BP1Q13283 466 aaKnown RBP eCLIP21.06■□□□□ 0.96
RETREG1-201ENST00000306320 IFFO2Q5TF58 517 aa21.06■□□□□ 0.96
RETREG1-201ENST00000306320 PAXBP1Q9Y5B6 917 aa21.06■□□□□ 0.96
RETREG1-201ENST00000306320 RGPD1P0DJD0 1748 aa21.06■□□□□ 0.96
RETREG1-201ENST00000306320 PTPN21Q16825 1174 aa21.05■□□□□ 0.96
RETREG1-201ENST00000306320 STRN4Q9NRL3 753 aa21.05■□□□□ 0.96
RETREG1-201ENST00000306320 CCDC69A6NI79 296 aa21.05■□□□□ 0.96
RETREG1-201ENST00000306320 ISM2Q6H9L7 571 aa21.05■□□□□ 0.96
RETREG1-201ENST00000306320 UBE3BQ7Z3V4 1068 aa21.05■□□□□ 0.96
RETREG1-201ENST00000306320 EAF2Q96CJ1 260 aaPredicted RBP21.05■□□□□ 0.96
RETREG1-201ENST00000306320 RAD50Q92878 1312 aa21.05■□□□□ 0.96
RETREG1-201ENST00000306320 ZNF790Q6PG37 636 aa21.04■□□□□ 0.96
RETREG1-201ENST00000306320 SMC2O95347 1197 aa21.04■□□□□ 0.96
RETREG1-201ENST00000306320 GUCY1B3Q02153 619 aa21.04■□□□□ 0.96
RETREG1-201ENST00000306320 AMOTQ4VCS5 1084 aa21.04■□□□□ 0.96
RETREG1-201ENST00000306320 SYT10Q6XYQ8 523 aa21.04■□□□□ 0.96
RETREG1-201ENST00000306320 LRRC2Q9BYS8 371 aa21.04■□□□□ 0.96
RETREG1-201ENST00000306320 POLA2Q14181 598 aa21.03■□□□□ 0.96
RETREG1-201ENST00000306320 LARP1Q6PKG0 1096 aaKnown RBP21.03■□□□□ 0.96
RETREG1-201ENST00000306320 TTC5Q8N0Z6 440 aa21.03■□□□□ 0.96
RETREG1-201ENST00000306320 DNAJC2Q99543 621 aaKnown RBP21.03■□□□□ 0.96
RETREG1-201ENST00000306320 TAF6LQ9Y6J9 622 aa21.03■□□□□ 0.96
RETREG1-201ENST00000306320 CEMIPQ8WUJ3 1361 aa21.03■□□□□ 0.96
RETREG1-201ENST00000306320 GRM8O00222 908 aa21.03■□□□□ 0.96
RETREG1-201ENST00000306320 ZKSCAN1P17029 563 aaPredicted RBP21.03■□□□□ 0.96
RETREG1-201ENST00000306320 ZRSR1Q15695 479 aaKnown RBP21.03■□□□□ 0.96
RETREG1-201ENST00000306320 LRRN4CLQ8ND94 238 aa21.03■□□□□ 0.96
RETREG1-201ENST00000306320 KAZALD1Q96I82 304 aa21.03■□□□□ 0.96
RETREG1-201ENST00000306320 IGKV5-2P06315 115 aa21.03■□□□□ 0.96
RETREG1-201ENST00000306320 FTOQ9C0B1 505 aaKnown RBP eCLIP21.03■□□□□ 0.96
RETREG1-201ENST00000306320 TATP17735 454 aaPredicted RBP21.02■□□□□ 0.96
RETREG1-201ENST00000306320 CCDC34Q96HJ3 373 aa21.02■□□□□ 0.96
RETREG1-201ENST00000306320 EPC1Q9H2F5 836 aa21.02■□□□□ 0.96
RETREG1-201ENST00000306320 ANKARQ7Z5J8 1434 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms