RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 FAM227BQ96M60 508 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 PDE4CQ08493 712 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 AMOTL1Q8IY63 956 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 AOPEPQ8N6M6 819 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 ANKRD24Q8TF21 1146 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 USP44Q9H0E7 712 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 CWC15Q9P013 229 aaKnown RBP15.45■□□□□ 0.06
DDX54-201ENST00000306014 HOXC9P31274 260 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 MCMDC2Q4G0Z9 681 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 CHST3Q7LGC8 479 aa15.45■□□□□ 0.06
DDX54-201ENST00000306014 ZSCAN12O43309 604 aa15.44■□□□□ 0.06
DDX54-201ENST00000306014 CCDC144CPQ8IYA2 1237 aa15.44■□□□□ 0.06
DDX54-201ENST00000306014 AKAP2Q9Y2D5 859 aa15.44■□□□□ 0.06
DDX54-201ENST00000306014 CROCC2H7BZ55 1655 aa15.44■□□□□ 0.06
DDX54-201ENST00000306014 AKAP4Q5JQC9 854 aa15.44■□□□□ 0.06
DDX54-201ENST00000306014 UNC5CLQ8IV45 518 aa15.44■□□□□ 0.06
DDX54-201ENST00000306014 CNNM3Q8NE01 707 aa15.44■□□□□ 0.06
DDX54-201ENST00000306014 MYRIPQ8NFW9 859 aa15.44■□□□□ 0.06
DDX54-201ENST00000306014 ZNF853P0CG23 659 aa15.43■□□□□ 0.06
DDX54-201ENST00000306014 RUFY1Q96T51 708 aa15.43■□□□□ 0.06
DDX54-201ENST00000306014 UBAC1Q9BSL1 405 aa15.43■□□□□ 0.06
DDX54-201ENST00000306014 CDC42BPBQ9Y5S2 1711 aa15.43■□□□□ 0.06
DDX54-201ENST00000306014 POLR3GO15318 223 aaPredicted RBP15.43■□□□□ 0.06
DDX54-201ENST00000306014 RAD21O60216 631 aa15.43■□□□□ 0.06
DDX54-201ENST00000306014 KLHDC4Q8TBB5 520 aa15.43■□□□□ 0.06
DDX54-201ENST00000306014 MPHOSPH8Q99549 860 aa15.43■□□□□ 0.06
DDX54-201ENST00000306014 NOL10Q9BSC4 688 aaKnown RBP15.43■□□□□ 0.06
DDX54-201ENST00000306014 BICC1Q9H694 974 aaKnown RBP15.43■□□□□ 0.06
DDX54-201ENST00000306014 AOX1Q06278 1338 aa15.43■□□□□ 0.06
DDX54-201ENST00000306014 LEKR1Q6ZMV7 388 aa15.43■□□□□ 0.06
DDX54-201ENST00000306014 AK7Q96M32 723 aa15.43■□□□□ 0.06
DDX54-201ENST00000306014 LMBR1LQ6UX01 489 aa15.43■□□□□ 0.06
DDX54-201ENST00000306014 MRPS27Q92552 414 aaKnown RBP15.43■□□□□ 0.06
DDX54-201ENST00000306014 ERCC4Q92889 916 aaPredicted RBP15.43■□□□□ 0.06
DDX54-201ENST00000306014 TXLNAP40222 546 aa15.42■□□□□ 0.06
DDX54-201ENST00000306014 ARHGAP29Q52LW3 1261 aa15.42■□□□□ 0.06
DDX54-201ENST00000306014 MICU3Q86XE3 530 aa15.42■□□□□ 0.06
DDX54-201ENST00000306014 KLF18A0A0U1RQI7 1052 aa15.42■□□□□ 0.06
DDX54-201ENST00000306014 RIOK3O14730 519 aaKnown RBP15.42■□□□□ 0.06
DDX54-201ENST00000306014 APOBRQ0VD83 1088 aa15.42■□□□□ 0.06
DDX54-201ENST00000306014 NSFL1CQ9UNZ2 370 aaKnown RBP15.42■□□□□ 0.06
DDX54-201ENST00000306014 SLC27A2O14975 620 aa15.42■□□□□ 0.06
DDX54-201ENST00000306014 HSP90AA4PQ58FG1 418 aa15.42■□□□□ 0.06
DDX54-201ENST00000306014 CDC37L1Q7L3B6 337 aa15.41■□□□□ 0.06
DDX54-201ENST00000306014 LGR6Q9HBX8 967 aa15.41■□□□□ 0.06
DDX54-201ENST00000306014 CPLX3Q8WVH0 158 aa15.41■□□□□ 0.06
DDX54-201ENST00000306014 IFIT5Q13325 482 aaKnown RBP15.41■□□□□ 0.06
DDX54-201ENST00000306014 CLTCL1P53675 1640 aa15.41■□□□□ 0.06
DDX54-201ENST00000306014 EPB41L2O43491 1005 aaKnown RBP15.4■□□□□ 0.06
DDX54-201ENST00000306014 ERLIN1O75477 346 aa15.4■□□□□ 0.06
DDX54-201ENST00000306014 SNRPA1P09661 255 aaKnown RBP15.4■□□□□ 0.06
DDX54-201ENST00000306014 WASF1Q92558 559 aa15.4■□□□□ 0.06
DDX54-201ENST00000306014 NAPBQ9H115 298 aa15.4■□□□□ 0.06
DDX54-201ENST00000306014 MAGEC2Q9UBF1 373 aaPredicted RBP15.4■□□□□ 0.06
DDX54-201ENST00000306014 PTPDC1A2A3K4 754 aa15.4■□□□□ 0.06
DDX54-201ENST00000306014 LMOD1P29536 600 aaPredicted RBP15.4■□□□□ 0.06
DDX54-201ENST00000306014 NOM1Q5C9Z4 860 aaKnown RBP15.4■□□□□ 0.06
DDX54-201ENST00000306014 TRERF1Q96PN7 1200 aa15.4■□□□□ 0.06
DDX54-201ENST00000306014 RPS6KB1P23443 525 aa15.4■□□□□ 0.06
DDX54-201ENST00000306014 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
DDX54-201ENST00000306014 SSH3Q8TE77 659 aa15.4■□□□□ 0.06
DDX54-201ENST00000306014 UNC13BO14795 1591 aa15.4■□□□□ 0.06
DDX54-201ENST00000306014 IBTKQ9P2D0 1353 aaPredicted RBP15.4■□□□□ 0.06
DDX54-201ENST00000306014 MARCKSP29966 332 aaPredicted RBP15.4■□□□□ 0.06
DDX54-201ENST00000306014 CCDC129Q6ZRS4 1044 aa15.4■□□□□ 0.06
DDX54-201ENST00000306014 CBX8Q9HC52 389 aa15.4■□□□□ 0.06
DDX54-201ENST00000306014 LRP2BPQ9P2M1 347 aa15.4■□□□□ 0.06
DDX54-201ENST00000306014 CASQ1P31415 396 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 TFCP2Q12800 502 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 ME3Q16798 604 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 CCDC150Q8NCX0 1101 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 OSBPL3Q9H4L5 887 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 DNAI1Q9UI46 699 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 SBNO1A3KN83 1393 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 SYKP43405 635 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 IFNL2Q8IZJ0 200 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 KRT222Q8N1A0 295 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 CWC25Q9NXE8 425 aaPredicted RBP15.39■□□□□ 0.05
DDX54-201ENST00000306014 ABCF2Q9UG63 623 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 GOLGA8AA7E2F4 631 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 IARSP41252 1262 aaKnown RBP15.39■□□□□ 0.05
DDX54-201ENST00000306014 PTH1RQ03431 593 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 AXDND1Q5T1B0 1012 aaPredicted RBP15.39■□□□□ 0.05
DDX54-201ENST00000306014 NCOA7Q8NI08 942 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 SLC12A7Q9Y666 1083 aa15.39■□□□□ 0.05
DDX54-201ENST00000306014 IFIT3O14879 490 aaKnown RBP15.38■□□□□ 0.05
DDX54-201ENST00000306014 ADAMTS2O95450 1211 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 KIF2CQ99661 725 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 NDUFB9Q9Y6M9 179 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 KIF1BO60333 1816 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 UBASH3AP57075 661 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 KCNG4Q8TDN1 519 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 CCDC102AQ96A19 550 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 MADDQ8WXG6 1647 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 MINDY4BA8MYZ0 360 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 DHX32Q7L7V1 743 aaKnown RBP15.38■□□□□ 0.05
DDX54-201ENST00000306014 IL17REQ8NFR9 667 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 LEO1Q8WVC0 666 aaPredicted RBP15.38■□□□□ 0.05
DDX54-201ENST00000306014 ZSWIM4Q9H7M6 989 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms